Chelonia mydas (green sea turtle): 102929827
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Entry
102929827 CDS
T02989
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102929827 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102929827 (PAN3)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102929827 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
102929827 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Pkinase
Torus
Motif
Other DBs
NCBI-GeneID:
102929827
NCBI-ProteinID:
XP_037747554
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All DBs
Position
1:45482594..45598973
Genome browser
AA seq
881 aa
AA seq
DB search
MNSGGLPCPSPVAGAPAGVGAAGVPGPAPGAGLKLKFCRYYAKDKTCFYGEECQFLHEEP
GAAPACPGPPPALGGLPLGLPGPSAPAAGPGYPHGAAPGAAAAAAGPKKAELGGSHGAGG
GGGGGGGGGGLDGPRLAIPGIDGGGLADASLTDSYFSTSFIGVNGFGSPAEAKYPMMQRM
TNSSSSPSLLNDSAKQYAGHDPLTSPASSLFNDFAALSLSQRRKPRKYRLGMLEERIVPV
GSKARKSKNAIGCLADRCKTGVPINMVWWNRVTENNFQTPNPTASEFIPKGGSTSRLNNV
SQSSMSAFSQALFSHPSMGSPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPN
PANYMVPTSASTPVTNAVSQPPSTGQVIQKETVGGTTYFYTDTTPAPLTGMVFPNYHIYP
PTAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADIPAVPTEVDSYHSLFPL
EPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKIQH
SNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMMSRHFNDPSADGYFTKRKWGQHDGPLP
RQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILVTGKTRLRVNCVGVFDVL
TFDNSQNNPLALMAQFQQADLISLGKVVLALACNSLSGIQRENLQKAMELVTINYSSDLK
NLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAK
LGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKLDAGV
PEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQL
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcggcggcctcccctgcccgtccccggtggcgggggccccggcgggggtcggg
gcggcgggggtcccgggcccggcccccggcgcggggctgaagctgaagttctgccgctac
tacgccaaggacaagacctgcttctacggggaggagtgccagttcctgcatgaggagccc
ggcgccgcccccgcctgccccgggcccccgcccgccctcggggggctcccgctcggcctg
cccggccccagcgcccccgccgccgggcccggctacccgcacggggcagcccccggagcg
gcggcggcggcggcggggcctaagaaggccgagctggggggcagccacggcgccggcggc
ggaggaggaggcggcggcggcggcggggggctggatggaccgcggctggcgattcctgga
atagatggcggtggtttagctgatgctagtctcacagattcctactttagtaccagcttc
attggtgttaatggatttggaagtcctgctgaagcaaaatatcccatgatgcagaggatg
acaaatagcagcagttctcctagcctcctcaatgacagtgccaagcagtatgcaggccat
gacccactgacttcaccagcttcatccttgtttaatgactttgctgccctcagtttatct
caaaggagaaagccaaggaagtatcgactggggatgctggaggagaggatagttccggtg
ggatcaaaggcacgaaaatcaaagaacgctattggctgtctggctgacaggtgtaaaaca
ggagtacccatcaatatggtttggtggaacagagtcacagaaaacaattttcagacacca
aatcctactgcaagtgagtttattccaaaaggtggatcaacttccaggctgaataatgtg
tctcagtcaagtatgtctgccttctctcaagccttgttctctcacccttccatgggaagt
cctgctactgctggactagctccaggaatgtcactgtctgcaggatcttctcctcttcac
tcccctaaaattactcctcacacatctcctgctcctagaagaagaagtcatactccaaac
ccagcaaattatatggtgcctactagtgcctctactcctgttactaatgctgtctcccag
cctccatctactggccaggtgattcagaaggaaactgtgggtggaacaacgtatttctac
actgatacaactccagcccctctcacaggaatggtatttccaaactatcacatttaccct
cccactgcacctcatgttgcttatatgcagccaaaagcaaatgcaccttccttcttcatg
gcagatgaactcagacaggagctgatcaaccgacatttaataacaatggctcagattgat
caagcagatatccctgcagtccctacagaagttgacagctaccacagccttttcccttta
gaaccactgccaccacccaatcggatacagaaaacaagcaactttgggtacattacatca
tgctacaaagctgtaaatagcaaagatgatctgccatattgccttcggaggatacatggt
ttccgtcttgttaacacaaagtgcatggtattggttgacatgtggaaaaaaattcaacac
tcaaatattgtaactctgcgtgaagtgtttaccaccaaagcatttggagaacattctctt
gtgtttgcatacgattttcatgctggaggagagactatgatgagcagacactttaatgac
cctagtgctgatggctatttcactaaaaggaaatggggtcagcatgatggtcctctgccc
cggcagcatgctgggttactgccagagtctcttatttgggcatatattgtgcagctcagc
tctgcgttgaggaccattcatacagcaggattagcatgtcgagttatggatccaacaaag
attctagtaacgggcaaaacaaggttacgagtgaattgtgttggagtctttgatgtttta
acattcgataacagtcagaataatccactggcactaatggctcagtttcagcaagcagat
ctgatctcactaggaaaagttgtgttggcgttggcttgcaattctttgtcgggaattcag
agagaaaatttacagaaagctatggaactggtgacaatcaactattcctctgatctgaag
aatctgattttgtatttgctgactgaccaaaataggcttcgcagtgtaaatgatatcatg
cctatgattggtgcacgattctatactcaactggatgctgctcaaatgagaaatgatgtt
atagaggaagaccttgcaaaggaggtgcagaatggaaggttgtttaggcttctagcaaaa
ttgggaacaatcaatgagaggccagaatttcagaaagacccaacttggtcagaaactgga
gaccgatatctactgaagctctttcgggatcatcttttccatcaggtgacagaagcgggc
actccttggattgacctcagtcacattatctcatgtcttaacaagttagatgctggtgtg
ccagaaaaaataagcctcatttccagagacgagaagagtgtccttgtggtaacttacagc
gatttaaaacgctgctttgaaaatacttttcaagaactaattgcagccgcaaatggtcag
ttgtag
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