Chelonia mydas (green sea turtle): 102931252
Help
Entry
102931252 CDS
T02989
Symbol
SMARCC2
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102931252 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmy03021
]
102931252 (SMARCC2)
03036 Chromosome and associated proteins [BR:
cmy03036
]
102931252 (SMARCC2)
Transcription machinery [BR:
cmy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102931252 (SMARCC2)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102931252 (SMARCC2)
PBAF complex
102931252 (SMARCC2)
GBAF(ncBAF) complex
102931252 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
102931252
NCBI-ProteinID:
XP_037739661
LinkDB
All DBs
Position
20:complement(2414886..2436246)
Genome browser
AA seq
1233 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVSQFDSARLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLARPNIFLHQEIEPKLLGKLKDIIKRHQGTVTEDRNNASHVVFP
VPGNLEEEEWVRPVMKRDKQVLLHWGYFPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVTDEKSPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETAGKDEEENSAGNKAEQAKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQSDSDTKAGRKSKEIEDLVPEAVKAKPELQTSASQQMLSFPDKGKEKP
TDLQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGADETRAETQPAEEKKELKESREGAAEEEVKEKLGEAPKKEEEKGKEGDSEKEAE
KGDGDSTAEKEKEPKEGQEEGSKDLAEAEGERKTKVERDIGEGNLSTAAAAALAAAAVKA
KHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQA
FHMEQLKYAEMRARQQHFQQMHQQQQQPPAPPLPPGSQPIPSSGAPLAPAAHSMPVAQAP
GAPTAASLVAQPSLAQTEQIGQAVPAVPGAQHTGPAQQGQTPAGSHAQPPFPGQQPSSQM
LPGTVGVSAHPGVPGNLPAALPFGMPPSIPFSMASNVADSISINLPANTPAHPLHGNLPC
GMLAGGALAPPNLPVTVSSAIHPSMLTTNGPPLTAPTLPHVSGLASAAAQSPAIVAAMQG
SLLPNAALAPDQGPPLQTDPIAPSTATPVPPTQ
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtcaagtactacgaggccgcggacacc
gtgagccagttcgacagcgcgcggctctggctgggcaagaactacaagaagtacatccag
gcggagcctcctaccaacaagtccctctccagcctggtggtgcagctgctgcagttccag
gaggaggttttcggcaaacatgtcagcaatgcgccgctcaccaagctgccgataaaatgc
ttcttggatttcaaagcgggaggctccctgtgccacatcctcgccgcagcctataaattc
aagagcgaccaaggatggcggcgtttcgatttccagaatccttcgcggatggatcgcaac
gtggagatgttcatgaccatcgagaaatccttggtgcagaacaactgcctggcccggcct
aacatcttcctgcaccaggagatcgaacccaaactgctgggcaagctgaaggacattatc
aagcggcaccaggggacggtcaccgaggatcggaacaacgcctcccatgtcgtcttcccg
gtccccggcaacctggaggaggaagaatgggttcgacctgtcatgaagagagacaagcag
gtccttctgcactggggctacttcccggacagctacgacacctggatccccgcgagtgaa
atcgaagcttctgtcgaggacgcgccaaccccggagaagccccggaaggtccacgccaag
tggatcctcgacacggacaccttcaacgagtggatgaacgaggaagactacgaggtgacc
gacgagaagagccccgtctcccgcaggaagaaaatctccgccaagacgctcactgatgaa
gtgaacagccccgactcggaccggcgcgacaagaagggcgggaactacaaaaagagaaag
cgctcgccctcaccatccccgaccccagaggccaagaagaagaacgccaagaaaggcccg
tcgaccccgtacaccaagtccaagcgcgggcaccgcgaggaagagcaggaggacctgacg
aaggacatggacgagccctcccctgtccccaacgtggaggaggtcacgctgcccaaaaca
gtgaacaccaagaaggactcggagtctgcgcccgtgaaggggggcaccatgactgacctg
gacgagcaggaagatgagagcatggagactgccggaaaggatgaggaagaaaacagtgca
gggaacaaagcggagcaggccaagaaccccgacctgcacgaggacaatgtgacggagcag
acgcaccacattatcatccccagctacgccgcctggttcgactacaacagcgtccacgcc
atcgagcgcagagccctgcccgagttcttcaacggcaagaacaaatccaagacccccgaa
atatacctggcttatcgcaacttcatgatcgacacctaccgactgaacccccaggagtac
ctgacctcgaccgcctgccgccggaacctggccggggacgtctgcgccatcatgcgggtc
cacgccttcctggagcagtgggggctgatcaactaccaggtggatgcggagagccggcca
acccctatgggccccccccctacatcgcacttccacgtcctggccgacaccccctcgggg
ctggtgccgctgcagcccaagacaccgcagggtcgccagagtgacagtgacacaaaggcc
gggcgcaagagcaaggaaatcgaggacctggtcccggaggcggtgaaagcgaaacccgag
ctgcagacctcggcctcccagcagatgctcagcttccctgacaagggcaaggagaagccg
acagacctgcagaacttcggcctgcgcacggacatgtacaccaaaaagaacgtcccgtcc
aagagcaaagccgccgccagcgccacccgggagtggacggagcaggagacgctgctgctg
ctggaggccctggagatgtacaaggacgactggaacaaggtgtcggagcacgtgggcagc
cgcacccaggacgagtgtatcctccacttcctgcgcctgcccatcgaggacccctacctg
gaggactcggaggcatcgctcgggcccctggcctaccagcccatccccttcagccagtcg
ggcaaccccgtcatgagcactgtggccttcctggcttccgttgtggacccccgcgtggcc
tccgcggcagccaagtcagctctcgaggagttctccaagatgaaggaggaggtgcccacg
gcgctggtggaagctcacgtccgcaaggtggaggaggcggccaaggttacgggcaaggcc
gacccggccttcgggctggagagcagcgggatcgcggggaccacgtctgatgagccggag
agaatagaggagagcggcgctgacgagacgcgggccgaaactcagccggcggaagagaag
aaggagctgaaggagtcccgggaaggagccgcggaggaggaagtgaaggaaaaactgggc
gaagcacccaagaaagaggaagagaaaggcaaagagggcgacagtgagaaggaggcggag
aagggtgacggggacagcacggccgagaaggagaaggagcccaaggagggccaggaggag
gggtccaaggacctggcggaggcagagggtgagaggaagaccaaggtggagcgagacatc
ggcgaagggaacctgtccaccgcggctgctgccgccctggctgctgctgctgtgaaggcc
aagcacctggccgcagtggaggagcgtaagatcaagtccctggtggccctgctggtggag
acccagatgaagaagctggagatcaagctgcgacactttgaggagctggagaccatcatg
gaccgggagcgcgaggcactggagtaccagaggcagcagctgctggcggaccgacaggcc
ttccacatggagcagctgaagtacgccgagatgcgcgcccggcagcagcatttccagcag
atgcaccagcagcagcagcagccgccggctccgcccctcccgcccggctcccagcccatc
ccgtcctccggggctcccttagcaccagctgcccactccatgcccgtggcccaggccccg
ggggcgccgaccgcggccagcctggtggcccagcccagcctggctcaaacggaacagatc
ggccaggcggtgccggccgtgccgggggctcagcacaccggaccggctcagcagggacag
acccctgccggctctcacgcccagcctccgttccccggccagcagccctcctctcagatg
ctccccgggacggttggagtgagcgctcatcctggcgtgcccggtaatctcccggcagct
ctgcctttcggaatgcctccatccatcccatttagcatggctagtaacgtagcagactcc
atcagtattaacctccccgctaacacgcccgctcatccactgcatggcaacctcccgtgc
ggcatgctggccgggggcgccctggccccgcctaacctgcccgtcaccgtgtctagcgcg
atccaccctagcatgctgacgaccaacggaccgccgctcaccgcgcccaccttgcctcat
gtctcgggactggcctcggcagctgcccaaagcccagccattgtggcagccatgcagggc
agtctccttccaaacgccgccttggcaccagaccagggcccccctctgcagacggatccc
atcgcacccagcacggccaccccggtcccgcccacgcagtga
DBGET
integrated database retrieval system
