Chelonia mydas (green sea turtle): 102931301 Help Entry 102931301         CDS       T02989                                  Symbol SPG11 Name (RefSeq) spatacsin isoform X1   KO K19026   spatacsin Organism cmy  Chelonia mydas (green sea turtle) Brite KEGG Orthology (KO) [BR:cmy00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cmy03400]     102931301 (SPG11) DNA repair and recombination proteins [BR:cmy03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      102931301 (SPG11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spatacsin_C S6PP_C Motif Other DBs NCBI-GeneID:  102931301 NCBI-ProteinID:  XP_037766195 LinkDB All DBs Position 10:81759659..81819996 Genome browser AA seq 2459 aa AA seqDB search MAAPLSRPAEAGSSVWGKLAGGPRRMEGAKGELRVLLVPLAREARSPPGDTAQVKLNRAQ DALGSRLASGGLHLRSLACGRAGRARGSPIPGPWADFMWEDAENNDPQGNKSKLLALSKN NELFVYELNREDGKSDTTPLYSWNEERLKKLLEVKNISLSSISSVRILSFKKSTSLLLLN NFILVHLDFPGEDTELQALDCFILDLSPQALERITDVNFCRGVLFLLDNSGWIYIFDTID GVHLADVDVALFQANVQDENKNTTIISPLTSVKVSHDLNVAVIVNSSNCAISIDLNLYFR EFPGHLFCKKIFQNLPVTRLEGIDEDDLASSDYSMKLMRFSFRTDRSWKAHLSSLCNTSK RPDSPNLVSNICLRWYQYLPHLEHYDYKICETSEKILSSIPQDIVYILSESTKKDYANIN DIGRQWKKIHPGGLEEMMKLECKSVTGFSALFALSAGDKELTVALWDLETQDVTYYHIGK NCIYVDCSGEEQLCLIQTEHGLSLILFGLTQEEFLNRLIIHGSAGIVDSLCHLNGWGRCS IPIHALEAGLENRQLDTVDFFLKSKENLFNLTSACSLPEQSTNITPQFYLRSVEELKPAL DLLCSAIRENDLETQSKHFSEQLLNLTLAFLNKQIREIFIHTKELDECLQKCVDILTTYI IELRTFMIKFPRKQTNLINIRCDFDEDIPRTEQSQMWETLTPEQVIFEAILNNRIPEAQT FFRVNQNPAQSLQELIQIGFELVYDSLLKGNVKEASELIRNMGFDVKEQLHKICFYTIDK NIRNLLVEVLQEQNYFSEKEKTVIAFVHQVENFYSGSFQDNKEIQPLSSFRNWKKEQDLT SHTAVLDTFLTCDKPQIHNREHRIMLNWGQWWDQHIQEMILLPKRSHEEFKSCNPAVLWM YLTSQHDWLNICSWIEESQPHSHTLFQQANWPSLTPDIIDQNTFCSSYMRNEILDKLARN GIFVPSEQDDFELLLLRLSHIGGVMQNPHPVPKYNSASGLDFHTHFILYCLERSLQHLLY TYLDYYSLTPSNCPVLDKKELHEAHPWFEFLVQCRGVASNPRDPKMIFQASLANAQILIP SNQASVSSMLLEGHTLLALATTMYAPGGIDQVLQNEDTEKPLKKVDPQLLKMALTPYPKL KAALFPQNTSHGILPPDISLYHLMQSLAPFDPTKLFGWQSSNTLAIADISSDLPHFSSPD LVNKYAIMERLDFSYYLHHGRPSFAFGTFLVQQLVKSKSPKQLIQQAGNEAYALALSFFY IPSIGAACICFLELLGLDSLKLRVDIKVADIIWSFKSRNEESQHNLIREALVGNLTKLAD GEKTAAAEVLMSLEEAFWDKIEHQEIKKTSSDSRRQWSLVMQFCKLHDIKLSTSYLKECA RSNDWLQFLIQTQMYSYQIDEVISILQDFTPILQDHLMLAFENLQRSRSATGSHHNNNNT SPLKTEHRQSEHTSDLFQILLCCQESPNPGCYLLAEGVRHHAPFLSVLAACFQDSNIIHC LCVWIITSVDNVTAAEATNHIQGSVENHEWDLHDLSTIWKMFLRRQKNKTLMNGFRLFLK DSPLLHILEMYELCMDYKKYNEAKTKLHNFQTSLANLKIADKPTPSIISVPWLESQAFFL LELMMQQCRTQYELGKLLQLFADIDKLLPDGPDVKKLCALSQILKDSSISINRSILTSYD TEYFQNECRLVLEQLQERGLFSLARKVAELAELPVDSVVIQEVLQDLHLLEHIGPWHRKQ TRINFWKKCHDRFMRNSVSSKAASAFFLAEANAVSEPSADEKVNSITEKHLLLTLAGHWL AQSDAVTLDKLEEIEKQIWLCCIAQQTLNRDDVLVKSRFSHQVSASGELSFDSLAKEFSF SKLTALNTSKYLQLDGLAFQDMSENMLDKAEVESLRFLIGCLLDEGRIHEASRVCRYFHF YSRDVSLVLHCRALASGEADLNSLHPDVRAILLVGDTADERDMQPRRLQSTSSVENWSHV LAPSPDDLVMTSLTTLIDECVHGRNYCRQVLCLYELSKELNCSYGEISAHDSEKVLQAIL SSQQPDRCKKAQMFIKTQGLQSETVAELVAEEIMQELLVSSERKGQKQIVNPADETQAFL ELAKLCKDHTLVGMKLLDKISSVPCGELSCTTELLILAHNCFSLTCHMEGIIRVLQTARL LTEAHLAPNEEFGLVVRLLTGIGRYNEMTYIFDLLHEKHYFEVLMRKKLDPSGTLKTALL DYIKRCRPGDSEKHNMIALCFSMCREIGENHEAAACIQLKLIESQPWEESLRDVPNLKKL LMKALTLFIDAAESYSKDSCIRQSLRCNRLTKLITLQLHFLNMNQSTMLINLNRQNLMDC IMSLPRFYQVAIVSEAYDFVPDWAEVLYQQVIIKGDFNYLEEFKQQRLLKSNIFEEIAKK VKQHQPTETAQKNLKTLLTYCEDIYLYYKLAYDNKFYDVVNMLLKDAQTGCCLKDMLAN NT seq 7380 nt NT seq  +upstreamnt  +downstreamnt atggccgcgcccttgtcgcgcccggctgaagccggaagttcggtctgggggaagctggct ggcggcccccggaggatggagggggcgaagggggagctgcgggtgctgctggtgcccctc gcccgggaggcccggagccccccgggcgacacagcccaggtcaagctcaacagggcgcag gacgctctgggaagccggctggcctcgggggggctccacctcaggtccctggcctgcggc agggccggccgggcccgcggcagccccatcccgggaccgtgggcggacttcatgtgggag gatgcagaaaataatgatccacaaggaaacaagtcaaaactcctggctcttagtaaaaac aatgaactgtttgtctatgagctcaatagagaggatggaaaatctgacacaactcccttg tacagctggaatgaagagagacttaaaaaacttctggaagttaaaaatattagtctttct tcaatatcgtctgtgaggattctgtcatttaaaaagagcacatctttgctgctgttgaat aattttattcttgtgcaccttgattttcctggagaagatacagaattacaggcacttgac tgctttatccttgatttgtctccacaagctttggagagaataacagatgtgaacttttgt agaggggttctatttttgttagataactctggttggatatacatatttgatacaatagat ggtgtgcatctagcagatgttgatgttgcactcttccaagcaaacgtgcaggatgagaac aagaatacaaccatcatatctcccctcacttcggtaaaggtgtcgcacgatctcaatgtc gctgtgatcgttaattcctctaattgtgccatttctattgatctaaatttgtatttcaga gaattccctgggcatttattttgtaagaaaatttttcagaatcttcctgtgacacgactg gaaggaattgatgaggatgaccttgccagctctgattacagcatgaaacttatgaggttt tctttccggacagacaggtcatggaaagcacacttgtcctcattatgtaacacgtcaaag agacctgactctccaaatttggtatctaacatttgcttacgttggtaccagtaccttccc catcttgaacattatgattataaaatctgtgagacgtctgagaagatcttgtcctccatt ccacaagacattgtctatatcctttccgaatcaacaaaaaaagattatgcaaatatcaat gacataggaagacaatggaaaaaaatccatccaggaggactagaagaaatgatgaaactt gagtgtaaatctgtgacaggatttagtgcactgtttgcattgtcagctggtgacaaagaa ttgactgttgctctgtgggacttagagacgcaagatgtgacatattatcacattggcaaa aactgtatttatgtggattgcagtggagaggagcagttgtgtctcattcagacagagcat ggactctccttgattctgtttggtttaactcaagaggaattcttgaatagactgataatc catggaagtgctggcattgtagattctctttgtcatctcaatgggtggggaagatgttcg attcccatacatgcattagaggccggtttggagaaccgtcagctagacacagtagacttc tttttaaagagcaaagagaatcttttcaatcttacttcagcctgttccttaccagagcaa tctaccaatatcacaccccaattttacttgagaagtgtggaagaactgaagccagcttta gatttactttgctcagcaatcagagaaaatgatttggaaactcagagtaaacacttctct gagcagctgctaaaccttaccttggcttttcttaacaaacaaatcagagagatttttatc cacacaaaagaactcgatgagtgcttgcagaagtgtgtggatattttaaccacctacatt atcgaacttagaacatttatgataaagtttcctcgaaagcagacaaatctcataaatata agatgtgattttgatgaagacattcccagaacagaacaaagccaaatgtgggaaacactc actccggagcaagttatttttgaggccattttaaacaacagaataccagaggctcagacg ttcttccgagtgaatcagaaccctgctcagagtcttcaagagctgattcaaataggtttt gaacttgtttatgacagtcttctaaagggcaatgtcaaagaggcctcagaactcataagg aatatgggttttgatgtgaaagagcagttgcataagatatgtttctacactattgataaa aacatacgcaacttgttggtggaagtgttgcaagaacaaaactatttttctgaaaaagag aagacagtgatagcctttgtgcatcaggttgaaaacttttattcaggatccttccaagac aataaagagattcagcctctttccagtttcaggaattggaaaaaagaacaagatctgacc agtcacacagctgttttggatacattcttgacttgtgacaaacctcagattcacaacagg gagcacagaattatgttaaactggggtcagtggtgggatcagcatattcaggaaatgatt cttcttcccaaaagatcacatgaagaattcaagtcctgtaatcctgcagttctttggatg tatctgacatcccagcatgactggcttaacatttgctcatggattgaagaatcccagcca catagtcataccttatttcaacaagctaactggccttctctgacaccagatattattgac caaaatacattctgcagcagctatatgagaaatgaaatattagacaagctggctagaaat ggaatttttgtcccatctgaacaagacgactttgaactcctcctcctaagattgagccat attggaggagtgatgcaaaatccacatcctgttccaaaatacaattctgcgagtggtttg gatttccacacccatttcatcctctattgtttagaacgtagtctgcagcatctgctatac acatatttagactattacagtttaactccttcgaattgtcctgttttggataaaaaggaa ttgcatgaggctcacccctggtttgaatttctagtacagtgtcgaggggttgcaagtaac ccaagagatccaaagatgatatttcaggctagtcttgcaaatgctcagatcttgattcct agtaatcaagctagtgtgagcagcatgctgttggaaggacatacacttttagcacttgca accacaatgtatgcacctggcggtatagatcaggttcttcagaatgaagatactgaaaag cccctgaagaaggtggatccacagctgttaaaaatggcattgactccttaccccaaactc aaagctgctctctttccgcagaacacttctcatggaattttgccacctgatatctcactc taccatcttatgcagtcattagcgccttttgatcccactaaattgtttggctggcagtcg tcaaatactcttgccatagcagacatctcaagtgacctccctcatttctcgtcccctgat ttggtaaacaaatatgccataatggaacgactggatttttcctactacttgcaccatgga cgcccatcatttgcttttggtacctttttggtccagcaattagtaaagagcaaatcccca aagcagctgattcagcaagcagggaatgaagcctacgctctagctctttctttcttttat ataccttcaataggagcagcatgcatttgttttctagagttacttggtcttgacagcctt aaacttcgggttgatattaaagttgcagatataatttggagcttcaagtctagaaatgaa gagtctcaacacaatttaataagagaagccttggttggaaatctaacaaaattggcggat ggtgaaaaaacagcagcagcagaagtgcttatgtccttggaagaagctttttgggataaa atcgaacatcaagaaataaagaaaacatccagtgactctagaagacagtggtctttggtg atgcagttctgtaagctccatgatatcaaactgagtacatcttacctaaaggaatgtgct agatccaatgactggctgcagtttctcatccagacccagatgtacagctaccaaatagat gaggtcatttccattcttcaagatttcactcccattttgcaagatcatttgatgctggcc tttgagaacttgcagcgctctcgctctgctacagggagtcatcacaacaacaacaacacc agtccactcaagactgagcacaggcagagcgaacatacaagtgacctctttcaaattctg ttgtgctgtcaagaaagtcctaaccctgggtgctaccttttggctgaaggagtgaggcac cacgctcccttcttgagtgtcttagcagcctgttttcaggattccaacattattcactgt ctctgtgtttggataattacctctgtggataatgttactgctgctgaagcaacaaaccat attcaaggctcagtagaaaatcatgaatgggatcttcatgacctttccaccatctggaag atgtttttaagaagacaaaaaaataaaactctcatgaatggtttccggctctttctaaag gattcccctttattacatatactggagatgtatgaactgtgcatggactacaaaaaatat aatgaagccaaaaccaaactccacaacttccagacaagtcttgcaaatcttaaaattgca gataaaccaacaccgtcaataatatcagtaccatggctggagtcacaggcattctttctt cttgaactgatgatgcagcaatgtagaacacagtatgaattaggaaaactgttacagctc tttgcagatatagataaacttctacctgatggcccagatgtgaagaaactgtgtgcactc agtcagattttgaaggattcatctatatctattaatcgctctatcctgaccagttatgac acagaatattttcagaatgaatgcagattagttctagagcagctgcaagagagaggattg ttctcactggcgaggaaggttgcagaattagctgaactgcctgtggacagtgtggttatc caagaggtacttcaagatttacatctcttagagcacattggaccgtggcatcgaaaacaa actagaattaacttctggaaaaaatgtcatgaccgttttatgagaaattccgtctccagc aaagcagcatctgcctttttcttagcggaggcaaacgcagtgtctgaaccttcagctgat gagaaggtaaacagcattacggagaaacacctgctgcttaccttggctggccactggcta gcacagagtgacgctgtgaccctggacaaattggaagaaatagagaaacagatctggctt tgttgcattgcacaacaaaccttaaatagagacgatgtgttggtcaagtcaaggttttct caccaggtttcagcgagtggtgaactttcctttgatagcttagctaaggagttttccttt tcaaagctaactgctctgaatacatcaaaatatttacaacttgatggccttgcattccaa gatatgtctgaaaacatgctggataaagctgaggtagaatcacttcgttttctgattgga tgtcttctagatgaaggacgtatacatgaagccagccgtgtttgccggtattttcacttt tatagcagagatgtttcattggtattgcactgcagagcactggcctcaggggaagctgat ctaaacagcttacacccagatgttcgagctattcttctggtgggagatacagcagatgag agagacatgcagcccagaagattacaaagcacctcaagcgtagaaaattggtcacacgtc ctggctccatctccagatgatctggttatgaccagtctgacgactctaatagatgagtgt gttcatgggagaaactactgcagacaagtcctctgtttgtatgagctttcgaaggaactg aattgctcctacggtgaaatatcagcccatgattctgaaaaggtgcttcaagcgatcctt tcatcgcagcagcctgacagatgcaagaaagcccagatgttcatcaaaacacagggtctc cagtctgaaactgtggcagaacttgtggctgaagaaatcatgcaggagttactggtatct tctgaaagaaaagggcaaaagcagattgtgaacccagcagatgagactcaggcattccta gagttggccaaattgtgcaaggatcatacactggttggcatgaagttattggataaaatt tcatctgtaccctgtggggaactatcttgcactacagagctgctgattttggcccataat tgctttagtctgacatgtcacatggaaggaattattagagtcctgcaaactgctcgactt ctcactgaggcacacttggcccccaatgaggagttcggccttgtggtccgactccttact ggtattggaagatataatgaaatgacgtacatattcgatctgctgcatgagaaacattac tttgaagtgcttatgagaaaaaagttagacccgagtggaacgctgaagacagctctgcta gattacataaagcgctgtcggccaggggacagtgaaaagcacaatatgatagccctgtgc tttagcatgtgtcgagaaattggagagaatcatgaggcagctgcttgtatacagcttaag ctcattgaatctcaaccatgggaagagtctctcagagatgtgcctaacttaaagaaactg ttgatgaaagctctgacgctctttattgatgcagccgaaagttattctaaggattcctgt atccgccagtccttgcgctgcaaccggttgacaaagctgataaccctccagcttcatttt ctgaacatgaatcagagcacgatgttgattaacctgaacagacagaacctgatggattgc atcatgtccctgcccagattctaccaggttgctattgtgtctgaggcttatgactttgtt ccagactgggctgaagttctgtatcaacaagtgattataaagggcgacttcaattacctg gaagaatttaagcaacaaaggttactcaaatccaatatatttgaggaaattgcgaagaag gtcaaacagcaccagccaactgagactgctcagaaaaatctgaagacgttactgacctac tgtgaagacatctacctgtactacaaattggcgtatgataacaagttctatgatgtggta aacatgcttttgaaggatgcgcagactggctgctgtctaaaggatatgctggcaaattag

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