Chelonia mydas (green sea turtle): 102931328
Help
Entry
102931328 CDS
T02989
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03020
RNA polymerase
cmy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102931328 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
102931328 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmy03021
]
102931328 (POLR2B)
03400 DNA repair and recombination proteins [BR:
cmy03400
]
102931328 (POLR2B)
Enzymes [BR:
cmy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102931328 (POLR2B)
Transcription machinery [BR:
cmy03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
102931328 (POLR2B)
DNA repair and recombination proteins [BR:
cmy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
102931328 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
102931328
NCBI-ProteinID:
XP_037752471
LinkDB
All DBs
Position
4:4372853..4399052
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSI
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaggatatgcaatatgatgaagatgatgatgaaatcactccagat
ttatggcaagaagcatgctggatagttattagctcctattttgatgagaaggggttggtc
cgacaacagctggattcttttgatgaattcattcagatgtctgtgcagagaattgtagaa
gatgcaccacctatcgatctacaagctgaagctcagcatgccacaggggaagttgaagaa
ccgccacgatatctgttgaagtttgaacaaatctatctctccaagcctacgcattgggaa
agagatggtgcaccttcacccatgatgcccaatgaagccaggctgagaaatcttacatat
tctgctcccttgtatgtggacataactaaaacagttattaaagaaggagaggaccagtta
cagacacagcatcagaaaacctttataggaaaaattcctatcatgctccgttcaacatac
tgcctgttgaatggcttgactgatcgtgatctttgtgaactgaatgaatgtcctcttgac
cctggtggctatttcattattaatggatcagaaaaggttctgattgctcaagagaagatg
gctacaaacacagtgtatgtgtttgcaaagaaagattcgaaatatgcttacacaggagaa
tgtagatcctgcctggagaattcctctcgaccaactagtactatatgggttagcatgctg
gccagaggagggcagggtgcaaagaagagcgctattggtcagcgtattgtagcaactctg
ccatatatcaaacaagaagtgcccatcattattgttttccgtgcattaggttttgtatct
gacagagacattttagagcacataatttatgactttgaagatcctgagatgatggaaatg
gtcaaaccttccttagatgaagcatttgtcatccaggaacagaatgttgcattaaacttc
atcgggtcaagaggtgcaaagcctggtgttaccaaagagaaaagaattaagtatgcaaaa
gaagtcttacagaaggaaatgcttccacatgttggtgtcagtgacttctgtgaaaccaaa
aaggcctattttctgggatatatggttcatagattactactggcagctctgggcagaaga
gaactcgatgacagagatcattatggcaacaaaagacttgatctggcagggccattgctt
gcattcttgttcagaggaatgtttaagaatttgctcaaagaagtgagaatatacgcacaa
aaatttattgacagagggaaagattttaacttggaactggcaattaaaacaaggattata
tcagatggtttgaagtactcattggctactggaaactggggtgatcagaagaaagctcat
caggccagagcaggagtatctcaggtgttaaaccgcctgacctttgcatccacactttcc
cacttgagacgcttgaattctccaattggtagagatggtaaactagcaaagcccagacag
ctgcacaatacattgtggggaatggtctgtcctgctgagactccagagggccatgcagta
ggacttgtgaagaacttagccttgatggcttacatttctgtggggtctcagccatctccg
attctggaatttttagaagaatggagtatggaaaatctggaagaaatatctccagcagcc
attgcagatgcaaccaagatctttgttaatggctgctgggtaggaatacacaaagatcca
gaacagctgatgaacacactaagaaaattacgtcgtcagatggacataattgtgtcagag
gtctccatgatcagggatattagggagcgagaaatccgcatctatactgatgctggcaga
atctgcaggccacttttaattgtggaaaaacaaaagctgctgttgaagaagaggcatatt
gaccaactaaaagaacgagagtacaacaactacagttggcaggatctcgtggccagcggt
gtagtagaatacatcgatacgctagaagaggagactgtgatgctggcaatgactccagat
gacttgcaggagaaaggagtggcatactgttcaacttacacacattgtgagattcacccg
tccatgatcctaggagtatgtgcatctattattcctttccctgatcacaaccagtctcct
aggaacacataccagtctgctatgggtaaacaggctatgggagtttatattacgaacttt
cacgttcgtatggatacactagcccatgtgttgtattaccctcaaaaaccccttgtgact
acacgctctatggagtacttgcgatttagagagttgccagcaggtatcaactcaattgtg
gccattgcgtcatacaccggttataatcaggaagactctgtcatcatgaaccgttctgct
gtcgatagaggttttttcagatctgttttctatcgctcatataaagaacaagagtccaag
aaaggatttgaccaagaagaagtttttgaaaaacctacacgtgaaacttgtcagggtatg
aggcatgccatctatgacaaactagatgatgatggtttgatagcacctggtgtacgtgtg
tcaggagatgatgtcatcattggcaaaacggtaactctgcctgagaatgaagatgaactg
gaaagcactaatagacgatacacaaagagggactgtagcactttcctacgaactagtgag
actggtattgtagaccaggtcatggtaacccttaaccaggaaggatacaagttttgcaaa
attagggtgcgctctgtgagaatcccacaaattggagataagtttgccagcaggcacggt
cagaagggtacctgtggtatccagtacagacaggaggatatgcctttcacctgtgaaggt
atcacacctgacataatcatcaacccccatgccatcccttcccgtatgacaattggtcac
ttgattgaatgccttcaagggaaggtatcggcaaacaagggagaaattggtgatgctaca
cctttcaatgatgctgtcaatgtgcagaagatttccaatctattatcagattatggctat
catctgagaggaaatgaggttctctacaatggcttcactggacgcaaaatcacatcacaa
atcttcattggtcctacttactaccagaggttgaaacatatggtagatgacaaaattcat
tctcgtgcaagagggccaattcagattcttaacaggcaaccaatggaaggtagatctcgc
gatggtggccttcgttttggagaaatggagcgagactgccagattgctcatggagcagct
caatttttgagagagagattgtttgaggcttcagacccataccaagttcacgtttgcaat
ctttgtggaataatggcaatagctaacacaaggacacacacgtacgagtgcagggggtgc
cgtaataaaacacagatttccttggtgcgaatgccatatgcctgtaaactcctttttcaa
gagctgatgtccatgagtattgcacctcgtatgatgagtatttag
DBGET
integrated database retrieval system
