Chelonia mydas (green sea turtle): 102931657
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Entry
102931657 CDS
T02989
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1 isoform X2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102931657 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cmy04990
]
102931657 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
cmy04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
102931657 (PDLIM1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
102931657
NCBI-ProteinID:
XP_037759596
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All DBs
Position
7:complement(51632428..51716698)
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AA seq
327 aa
AA seq
DB search
MSSHRVALQGPGPWGFRLVGGKDFEQPLTISRVTPGSKAAIANLCIGDVIVAIDGENTDN
MTHLEAQNKIKSCIDEITLTVGRTESKVWSPLVTEEGKPNPYKMNLASEPQEIRHIGSAH
NRSAMPFTAATASSTAPKVITAQYNSPAGLYSSENIQTFNSAVESKSSGDAQDPSKPLEH
HNQPSSNLVIDKESEVYKMLQETEDPKEPPRQSASFLVLQEILESEGDPNKPSGFRSVKA
PMTKVASSIGNAQKLPICDKCGSGIVGAFVKLRDKQRHPECYVCSDCGTNLKQKGHFFVE
DCIYCETHARERVTPPEGYEVVTVFPK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccaccgcgtcgccttgcagggcccggggccctggggcttccgcctggtgggg
ggcaaggacttcgagcagccgctcaccatctcccgggtgactcctggcagcaaagctgca
atagccaatttatgtataggagatgtcattgtggcaattgatggggagaacacggataac
atgacacacttagaagcgcagaacaaaatcaagagctgcatagatgagataactctgaca
gtcggcagaacagaatccaaagtctggtcccctctggtgacagaggagggaaagcccaat
ccatacaagatgaatctggcttctgaaccccaggaaataaggcacataggaagcgcacac
aaccggagtgctatgccattcactgctgccaccgcttccagcactgcccccaaagtgatc
actgcccagtacaacagccccgcaggcctgtactcctcagaaaacatccagaccttcaac
agtgctgtggagtctaagtcatctggtgatgcccaggaccccagcaagcctttggagcac
cacaaccagccctccagtaaccttgtcatagacaaggagtctgaggtttacaagatgctc
caggagactgaagacccaaaggaaccacccaggcaatctgcttcattccttgtgctacaa
gaaattttagaatctgaaggggatcccaataaaccttctggatttagaagcgtgaaagca
ccaatgacaaaagttgcctcgtcgattggaaatgcccagaaactgcccatttgtgataag
tgtggatccggcattgtgggggcgttcgtgaaactgcgtgacaagcagcgccatccagag
tgctatgtgtgtagcgactgcgggacaaacctcaagcagaaaggacacttctttgtggag
gattgcatctattgcgagacgcatgcccgggagcgagtgaccccgcccgaaggctatgag
gtggtcactgtctttccaaagtga
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