Chelonia mydas (green sea turtle): 102931662
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Entry
102931662 CDS
T02989
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmy03021
]
102931662 (CHD1)
03036 Chromosome and associated proteins [BR:
cmy03036
]
102931662 (CHD1)
Transcription machinery [BR:
cmy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
102931662 (CHD1)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
102931662 (CHD1)
SLIK complex
102931662 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
Motif
Other DBs
NCBI-GeneID:
102931662
NCBI-ProteinID:
XP_007054152
LinkDB
All DBs
Position
5:complement(61828176..61914920)
Genome browser
AA seq
1807 aa
AA seq
DB search
MNGHSDEESIRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDTSREKKQVQAKPPKIGGAEFWKSNPSILAVQRSAMLRKQQQQQQKAASSNSGS
EEDSSSSADTLDDSSSETKRKKHKDEDWQMSGSGSVSGTGSDSESEEEREKSSCEESESD
YEPKNKVKSRKPPSRIKPKSGKKSAGQKKRQLDSSDEDEDDDYDKRGSRRQATVNISYKE
AEETKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRVGRKGATGATTTIYAVEADGDPN
AGFDKSKEPGETQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLK
NASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE
DGALIAKKFQSCIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRDY
QLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTS
WQREIQTWAPQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLG
GLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEK
FSSWEDFEEEHGKGREFGYASLHRELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQ
YYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLI
RSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRK
QALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK
KQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEE
LSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANF
SNMDEDDIGLEPERNSRNWEEIIPELHRRRLEEEERQKELEEIYMLPRMRNCAKQISFNG
SEGRRSRNRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGP
LERLDAIARDAELVDKSETDLRRLGELVHSGCIKALKDNSSGQERAGGRLGKVKGPTFRI
SGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYAIPCHTKAAHFDIDWGKEDDSNLLIG
IYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEAQR
LSGAGNSKRRKTRAKKNKVVKLAKVKEEIKSDSSPLLSEKSDEEEEEDNKDEIASVKHPN
KKIKAEKENDEKSEPDIGIKKEVEEKRETKEKENKRELKREKKEKEDKKELKEKDMKEKR
ESKVKESTQKEKEAKEEKINEVKSDHKDKTKKATSADTPVHITAISDPVPISEESEELDQ
KTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQI
KQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHNDQNISSNVNTHVIRNPDVER
LKENTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDAYKKSDSRKRPYSAFSNGKDHRDWD
HYKQDSRYYSDSKHRKLDDHRSRDHRSSLEGNLKDSRSHSDHRSHSDHRIHSDHRSSSDY
SHHKSSRDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPLGHRSPFEHSADHKSTPEH
TWSSRKT
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaggaaagcataagaaacagtagtggagaatcaagccagtcg
gatgacgattctggttcagcatcaggttctggatctggttcaagttctggaagcagtagc
gatggaagtagcagccagtcaggtagcagtgactctgactctggttcagagtcaggcagt
cagtcagaatcagagtctgacacatctagagagaagaaacaagttcaagcaaaaccacca
aaaattggtggagctgagttttggaaatcaaatccaagtattttggctgtacagagatca
gcaatgctcaggaagcagcagcagcagcagcagaaagcagcttcatcaaacagtgggtca
gaagaggattcctctagtagtgcagacactttggatgactcatccagtgagaccaagagg
aaaaaacataaagatgaagactggcaaatgtctggatcaggatctgtctctgggactggt
tcagattctgaatcagaggaggagagagagaaaagcagttgtgaagagagtgaatctgac
tatgagccaaaaaataaagtgaaaagcaggaaacctccaagcagaattaagccaaaaagt
gggaaaaagagtgcaggacagaaaaagaggcaacttgattcatccgatgaggatgaggat
gatgattatgataaaagagggtctcgtcgccaggcaacagtcaatattagttacaaagaa
gctgaagaaacaaagacagattcagatgacttgctggaagtctgtggagaggatgtccca
caacctgaagaagatgaatttgaaactatagaaaagtttatggatagtcgtgttggacga
aaaggagccactggtgctacaaccaccatctatgcagttgaggcagacggtgatccaaat
gcagggtttgataaatcgaaggagccaggagaaacacagtatctaattaaatggaaaggc
tggtctcatatccataacacatgggagactgaagaaaccttgaagcagcagaatgttaaa
ggaatgaagaaactggacaactacaagaaaaaggatcaggaaacaaaacgatggctgaaa
aatgcttctccagaagatgtggaatattataactgccagcaagaacttacagatgatctt
cataaacaatatcaaatagtggagagaataattgctcattcaaatcagaagtcagcagca
ggttatccagattattattgcaagtggcagggtctcccttactcagagtgcagctgggaa
gatggtgctctcattgccaaaaaatttcagtcatgcatcgatgagtattttagcagaaat
caatccaagacaactccttttaaggactgcaaggttttaaaacagaggccaaggtttgtt
gcactgaagaagcaaccatcatatattggtggccatgaaggtttagagttaagagactat
cagttaaatggactaaactggctcgctcactcctggtgcaaagggaacagttgtattctt
gcagatgaaatgggtttgggtaaaacaatacaaactatttcttttctgaactacctgttt
catgaacatcagttgtatgggcctttcttgctggtagtgccactttctactttgacatct
tggcaaagagaaattcagacgtgggctcctcagatgaacgctgtggtttatttaggagac
atcaatagcagaaacatgataagaactcacgaatggatgcatccacagaccaaacggtta
aaatttaatattcttttgacaacttatgaaattttgctaaaggataagtctttccttggt
ggtctaaattgggcatttataggagtggacgaagctcatcgtttaaaaaatgatgattcc
cttctatacaagacactaatagactttaagtcaaaccatcgtcttcttatcactggaact
cctctgcaaaactccctcaaagagctctggtctttgctgcacttcatcatgccagaaaag
ttttcttcctgggaagattttgaagaggagcatggcaaagggagagaatttggctatgca
agtcttcacagagaacttgagccatttctgttacggagggttaagaaagatgtagaaaaa
tctctacctgccaaggttgaacagattttgagaatggagatgagtgcattgcagaagcaa
tattacaagtggattttaaccaggaattacaaagccctgagtaaaggttcaaagggcagt
acctcaggctttttgaacatcatgatggaactcaagaagtgttgtaaccattgctacctc
attaaaccaccagatgataatgaattctataataaacaagaggccttacagcatttaatc
cgtagcagcgggaaactaatccttcttgacaagctactgattcgcctaagggagcgtggc
aacagagttcttattttctctcagatggtgaggatgctggacatcctagcagaatatttg
aagtatcgtcaattcccctttcagagactagatggctcaataaaaggggaattgaggaag
caagcactggatcattttaacgcggaaggatcagaggatttctgctttttactgtctacg
agagctggagggctaggtataaacttggcatctgctgacaccgtagttatatttgattct
gactggaacccacagaatgatctgcaggcacaggctagagctcataggattggccaaaag
aaacaggttaatatttatcggctagtcacaaagggatcagtagaggaggatattcttgaa
agagccaagaagaagatggtgttagatcatttagtaattcagagaatggacactacaggg
aagaccgtactccacacaggttccgctccttcaagctctactccttttaataaggaagag
ttgtcggcaattttaaagtttggtgctgaggaactttttaaggaacctgaaggagaagag
caggagccacaggaaatggatatagatgaaatcttgaagagggctgaaacacgggaaaat
gagccaggcccattaactgtaggagacgagttgctttcccagtttaaggtggccaatttt
tccaatatggatgaagatgacatagggttggagcctgaacgaaattcaaggaactgggaa
gaaatcattccagagctccacaggcgaagattagaagaggaggaaagacagaaggagctt
gaagaaatttatatgcttccaagaatgcgaaactgtgcaaaacagatcagcttcaatgga
agtgaagggaggcgtagtaggaacagaagatactctggttctgatagtgattctatctct
gaaagaaaacgacccaaaaaacgaggaagaccacgcactattccacgagagaatattaaa
ggatttagtgatgcagagattaggcggtttatcaagagttacaagaaatttggtggccct
ctggaaaggctagatgctatagctagagatgctgaattagttgataaatctgagacagac
cttaggcgcttgggggaactggtacacagtggatgcattaaggctttaaaggacaattcc
tctggacaagaaagagcagggggcagacttggaaaagttaaaggcccaacattccgaata
tcaggagtacaagtgaatgcaaagctagtcatctctcatgaggaagagttggcaccattg
cacaagtctattccttcagatccagaagaaaggaaacggtatgccattccatgtcacact
aaggcagctcattttgatatagattggggcaaagaggatgactccaatcttttaataggc
atctatgaatatgggtatggtagttgggaaatgataaaaatggatcctgacctcagcttg
acacacaagattctaccagatgatccagataagaaaccccaggccaagcagttgcagacc
cgagcagactacctcattaaattactcaataaagatcttgccaggaaggaagcacaaaga
ctttctggtgcaggaaactcaaagaggaggaagacaagagctaagaagaataaagtggta
aaactcgcaaaagttaaagaggagataaaaagtgattcttctccactgctctcagaaaaa
tctgatgaagaggaagaggaggataacaaggatgagatcgcttcagtgaaacatccaaat
aaaaaaataaaagcagaaaaagaaaatgatgaaaaatctgaaccagatattggtataaag
aaggaggtagaagaaaagagagaaacaaaagaaaaggaaaataagagggagctgaaaagg
gagaaaaaagaaaaagaggataagaaagaattaaaggaaaaagatatgaaagaaaagaga
gaaagcaaagtaaaggagtccacacagaaagaaaaagaagcaaaggaagagaagataaac
gaagtcaaatctgaccacaaagacaaaaccaagaaagctacatcagcagatactccagtc
catattactgcaattagtgacccagttcctatatctgaagaatctgaagaactggatcag
aagacattcagtgtatgcaaagaaagaatgaggcctgtcaaagcagcgctgaaacagctg
gatagaccagaaaaaggtctttcagaaagggaacagctggagcatactagacagtgtctg
atcaaaattggggatcacatcactgaatgtctaaaagagtacacaaatccggaacaaatt
aagcagtggaggaaaaatttgtggatttttgtgtcaaagtttacagaatttgatgccaga
aagctgcacaaactatataaacacgcaatcaaaaaacgccaggaatctcagcaacacaat
gaccagaacatcagcagcaatgtgaacacacatgtgattagaaatccagatgtggaaaga
ctgaaagagaatacaaaccatgatgacagtagcagggacagttattcctctgacagacat
ttgtcacaataccacgatcatcacaaagacagacatcagggagatgcttacaaaaaaagc
gactctaggaaaaggccctattctgccttcagcaatggaaaagatcacagggattgggat
cactacaaacaggacagcagatactacagtgatagtaaacatagaaagctggatgaccac
aggagtagagatcacaggtcaagcctggaaggaaatttaaaagacagtcggtctcattca
gaccaccgttcccattcagaccaccggatacactcagatcaccgatccagttcagactac
agccatcataaatcttccagggactatagataccactcagactggcaaatggaccataga
gcttccagtagtggcccaaggtcaccactagatcagaggtctccttatggctcaaggtct
cccttaggacacagatctccctttgaacactcagcagatcacaaaagtacacctgaacat
acatggagtagccggaaaacataa
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integrated database retrieval system
