Chelonia mydas (green sea turtle): 102931686
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Entry
102931686 CDS
T02989
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X4
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmy03000
]
102931686 (RC3H1)
04121 Ubiquitin system [BR:
cmy04121
]
102931686 (RC3H1)
Transcription factors [BR:
cmy03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
102931686 (RC3H1)
Ubiquitin system [BR:
cmy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102931686 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
102931686
NCBI-ProteinID:
XP_007061233
LinkDB
All DBs
Position
8:complement(47929167..48030338)
Genome browser
AA seq
1136 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IDLLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAILSDE
GAVDLPSRKSSALPNGIVSTGSTVTQLISRGTDSSYDSALKPGKIDHLSSSAPGSPPDLL
ESVPKSSISALPVNPHPVPQRGPTDLPPMSFSKQPQMVSRGSQLYPAQQADVFYQDPRGA
APPFEPSPYPQGVYYPTQSSQCMSRFVRPPSSAPEPGGPYLDHYPPYVQDRMVNSQYGTQ
PQQYPPMGQPMYQHYESRRVYPSAQPYQREEIVRGSPVPIDVPHGAAPPYVPESRDRYQQ
VEGYYPVGPHLNQIRSSYHREPYNRLPPPSQTHPSLDELHRRRKEIMAQLEERKVISPPP
FAPSPTLTHPFHPEEYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAA
GSVEMANIDSKGIRDQRLDLQRRAAEAGDDDLIPFGDRPTVSRFGAISRTSKTMYQSSGP
MQAMAVQGASTKSINISDYSPYGTHGGWGASPYSPHQNIPSQGRFSDRERLSMSDVASHG
KPLPSAEREQQLRLELQQLNHQISQQTQLRGLEAVNNRLLLQREATTLAGQPQPPPHKWP
AMISSEQLSMELHQVEREIGKRTRELSMETQSSLDMKSNLGTNKQTENGQVEPQSKVPAE
DLTLTFSDVPNGSVLSQENISLLSNKTTSLSLSEDPEGGGDHQDSQRTGVAPTSSP
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggattttctctcctgcccaatttgcacacagact
tttgacgaaacgatccggaagcccatcagcttgggctgtggccacactgtctgcaagatg
tgcctcaacaagctccaccgtaaggcatgccccttcgaccagaccactatcaatacagat
attgatctcctccctgtgaactcagccttgttgcagctagtgggtgctcaggttcctgag
cagcagccaattactttgtgcagtggagtagaagacaccaaacattatgaggaggccaag
aaatgtgtggaagaactagcgttgtacctcaaaccactcagcagtgcgagaggtgtgggt
ctgaacagtaccactcagagtgtgctaagtcgccccatgcagagaaagcttgtgacgcta
gttcactgccagctagtagaggaagaagggcggatcagggccatgcgtgcagcacggtca
ctgggtgaaagaacagtcacagagctcattcttcaacatcaaaacccccagcaactctct
tccaacctctgggctgcagtgagggccaggggctgtcagttccttgggccagcaatgcaa
gaggaagcactgaagctggttctgctggctctggaagatggatctgctttgtcacgaaag
gtcttggttctctttgtagtgcagagattggagccacgatttcctcaagcttctaaaacc
agcattgggcatgttgtccagcttctttacagagcctcctgcttcaaggtgactaaacgt
gatgaggactcctccctgatgcagttgaaggaggagttccgtacctatgaagctctgcga
agggaacatgattcccagattgtgcagattgccatggaagcaggtttacgcattgcaccg
gatcagtggtcctcgctgctatatggagaccagtcccacaaatcccacatgcagtccatc
attgacaagttgcagaccccagcctcatttgcacagagtgttcaagaactaaccattgct
ctccagaggactggagacccagccaacctgaacaggcttcgacctcacctagagctcttg
gcaaatattgaccctagtccagatgccccacccccaacatgggaacaactagaaaatgga
ttagttgctgtgaggacagtggtacatggactagttgattacattcagaatcacagcaag
aaaggaacagatcagcagcagcctcctcaacacagcaagtataagacatatatgtgccga
gacatgaagcagagaggagggtgtccccgtggagccagctgcaccttcgcacattcgcag
gaggaattagaaaaatttcgtaaaatgaacaaacgcctggttcccagaagacccctgagt
gcctccttgggccagctaaatgaggtgggcctgccttcagcagctatcctctcggatgaa
ggggcagtggacttgcccagtagaaaatcctctgccttgccgaatgggattgtgtctaca
ggcagcacagtgacgcagcttatctcccgagggaccgactccagctatgattctgctctg
aagccagggaagatcgaccacctgagcagcagtgctcctggatcccctcctgacttgctg
gagtctgtccccaagagctctatttctgccttaccagtgaacccccaccctgtgccccag
agaggaccgacagacctgcctccaatgtctttctccaagcaaccccaaatggtatcacga
ggatcacagttgtatcctgctcaacaagcagatgtgttttatcaggatcctagaggagct
gccccaccatttgagccatcaccttatccacaaggtgtgtactatcctactcagtcctca
cagtgcatgtctcgttttgtccgacctccatcatctgctcctgaacctggtggtccttac
ctagaccattacccaccctacgttcaggatcgtatggtgaattcgcagtatggcacacag
ccgcagcagtatcctcccatgggacagcctatgtaccaacactatgagagccgtcgtgtg
tacccctctgcccagccataccagcgggaagagattgtccgaggaagccccgtgcccatt
gatgttccacatggagctgcacctccctacgtacctgaatccagagacagataccagcaa
gtggagggttattatccagtgggtccacatctcaatcagatcagatcttcataccacaga
gagccttataaccgacttccacctccatctcaaacccatcccagcctggatgagcttcat
cgccgaaggaaggaaatcatggcccagttagaagagaggaaggtgatctccccacctccc
tttgcaccgtcaccaactttgactcaccccttccacccagaggagtacttggatgaagac
ctgaaggtagctgggaaatacaaaggaaatgattatagccagtactctccttggtcgtgt
gacaccattggctcctacattggaaccaaagatgcaaaacccaaagatgttgtggcagca
gggagtgtagagatggcgaacatagacagtaaaggcatacgtgaccagcggttggaccta
cagagaagggcagcagaagctggggatgatgacctcatcccatttggagaccggccaact
gtatcaaggtttggggccatctcgcgtacttccaaaacaatgtaccagagttctggcccc
atgcaggccatggcggtacagggagcttccaccaaatctatcaacatttcagattacagt
ccgtatggaactcatggtggctggggagcttctccatattcaccccaccaaaacatacct
tctcagggacgcttcagtgacagggagagattgtccatgtcagatgtggccagtcacggg
aaacccttaccctcagctgagagggagcagcaactcaggctggaactgcagcaactaaac
catcagatcagccagcagacacagttacgaggactggaggctgttaataacaggctgctg
ttacagagggaggcgaccaccctggcaggccagccacagccaccacctcataaatggcct
gcaatgatctcaagtgaacagctgagtatggaactgcaccaggtggagagggaaatcgga
aagagaacccgtgagctgagcatggagacccagtcttcactggacatgaaaagcaacctt
ggcaccaataaacagacagaaaatgggcaagtcgaaccacaaagcaaggttccagctgag
gacctcacactgacgttcagtgatgttccaaatggatcagtcttgtcgcaagagaacatc
agcctcctatcaaacaagaccacatctctgagcctgtcagaggatccagaagggggagga
gaccaccaggactcccagagaacaggagttgcacccacctcttctccatga
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integrated database retrieval system
