Chelonia mydas (green sea turtle): 102932010
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Entry
102932010 CDS
T02989
Symbol
MSR1
Name
(RefSeq) macrophage scavenger receptor types I and II
KO
K06558
macrophage scavenger receptor 1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102932010 (MSR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmy04131
]
102932010 (MSR1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cmy04090
]
102932010 (MSR1)
Membrane trafficking [BR:
cmy04131
]
Endocytosis
Phagocytosis
Scavenger receptors
102932010 (MSR1)
CD molecules [BR:
cmy04090
]
Proteins
102932010 (MSR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
Collagen
Macscav_rec
SRCR_2
DUF6377
DUF1317
Motif
Other DBs
NCBI-GeneID:
102932010
NCBI-ProteinID:
XP_007067448
LinkDB
All DBs
Position
4:85998199..86032641
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AA seq
465 aa
AA seq
DB search
MCTILAFDIQNMASCEEDHSDGIFCTDQHSDCVKFDTLSEKALFSLCTKKVMDHQRKKQK
CFMLTLSILYLLVFSIVVVIIRLAVHVSEMEKNLKNDTNLVSENNIQRCFNGDCPGKARE
GKEEQREIIIAHTEALHQIAKEISELKTNLHQKSEHFRNLSTATEQKLWEVGLQINTSTL
AMQVLRKLIEDIQTSFRFLNLTLAEVQSAAEERNNKYTGVFLKQLEDITNLWDNWYNTSA
TIVTIKQQQSNLEQEIKGEVKLLNNITNDLRLKDWEHSVALRNITLVQGPPGPKGEKGDK
GVRGDQGVEGVRGLRGFPGAKGEVGQQGRPGNPGQKGSKGIPGPKGEKGDKSGSSSTIAI
SSSIQLVGGHVPNEGRVEIFHAGEWGTICDDHWDIRDGAVVCKSLGYSAASKIHSGAYFG
QGTGQIWMDEVLCFGYETSVENCIFKGWGVTDCKHDEDAGVTCKV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtgcactattttagcctttgacattcaaaatatggcaagttgtgaggaagatcattca
gatggaattttctgcacagaccagcattctgattgcgtcaagtttgataccctgtctgag
aaagcactgttttcgctatgtacaaaaaaggtcatggatcatcaaagaaaaaaacagaaa
tgttttatgcttaccctcagtattctctatctgcttgtattttccattgtcgttgtaatc
atcagactagcagttcacgtatccgagatggaaaagaacctgaagaatgacactaatcta
gttagtgagaataacatacaacggtgcttcaatggagattgtcctggcaaagcaagagaa
ggaaaagaggagcagagagaaatcatcatagctcacactgaagctttacatcaaattgcc
aaagagatttcagagctgaaaactaaccttcaccaaaagtcagagcatttccgaaatcta
agtacagcaactgaacaaaagctctgggaggttggccttcagattaacacctcaacctta
gcaatgcaagtccttcggaagttgatagaagatattcagacctcatttaggtttctgaat
ttgacattagctgaagttcagtctgctgcagaagagaggaacaataaatacacaggagtg
ttccttaaacaactagaggatatcacaaacctgtgggataattggtacaacacatcagca
accattgttaccataaaacaacaacaaagcaatctggagcaagaaattaaaggcgaagtg
aaacttttgaataatatcacaaatgacctcagattaaaagactgggagcattcagtagca
ttaaggaatattacattagtgcaaggtcctcctgggcccaaaggagagaaaggtgataaa
ggtgtcagaggagatcaaggtgtagaaggagttcgtgggctaagaggttttcctggagcc
aaaggggaagttggacaacaaggtcgtcctggaaatcctggacaaaaaggatcaaaggga
attccagggccaaaaggggagaaaggagacaaaagcggaagtagcagcaccattgcaata
tcttccagtattcaacttgtaggaggacatgttcctaatgaaggtagagtggagattttt
catgctggagaatggggcactatctgtgatgaccactgggatattcgtgatggagctgtg
gtctgtaagagtctggggtattcagcagcatctaaaattcacagtggtgcctattttgga
caaggtactggtcaaatatggatggatgaagttctttgttttggctatgaaacctctgtt
gaaaattgtatatttaaaggctggggtgtgacagattgcaaacatgatgaagatgctggt
gtcacttgtaaagtttaa
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