Chelonia mydas (green sea turtle): 102932063
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Entry
102932063 CDS
T02989
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102932063 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmy01009
]
102932063 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmy04515
]
102932063 (PCDH20)
Protein phosphatases and associated proteins [BR:
cmy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102932063 (PCDH20)
Cell adhesion molecules [BR:
cmy04515
]
Cadherins
Protocadherins
102932063 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
102932063
NCBI-ProteinID:
XP_037750949
LinkDB
All DBs
Position
1:complement(68518231..68524507)
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AA seq
975 aa
AA seq
DB search
MRLRLLAEVLPAICMKSEGRVFCCLPTRSEMTAASVGMNCQGTGRRSQARGTSWLPRSRH
RQPEMGHLRGAGRATSPRNLQHLFLFLLFIGPFNCFASYSRATELFYSLNEGLPAGVLIG
SLAQDLRLHGVAAEGPPTRRREPVLSFSLASQGLGGQYVSLDNRSGELHTSALQIDREAL
CLETGVGSPASLLSPSSEPCLLLLDVLVLPQEHFRLVKVKIAIRDVNDNAPHFPVPNMRL
WVPENAPIDTRLAIEHPALDPDLGTNAVQTYRLQDDYGVFTLDVEENESGERTPYLIVMG
ALDREAREEYVTLIIAEDGGTPPLLGSATLTIGISDINDNCPQFSDSQLNVTVYGNSSAG
THVATIHAVDMDLGSNAQISYSYSQKVPQPSRDLFHLDESTGAIKLSSKIDGDAPRLHRL
TILANGPGCIPAVITVLVSIIKVMLRPPEVVPRFIANEVEGVVYLKELEPVNTPIAFFTI
KDPDEKYKVDCFLDGNGPFKLSPYKPYNNEYLLETTRPLDYEVQQLYEISVVAWNSEGFH
VNKIIKVQVLDDNDNSPVFPQQLIELSIEENNAPNAFLTKLHATDADSGERGKVSYFLGP
DAPSYFSLDKTTGVLTVSTQLDREEKEKYRYSVKAIDSGLPPRESIVTVTITVLDKNDNS
PRFINKDFSFFVPENFPGFGEIGVISVTDADAGQNGWVALSVVNGSDIFVIDTGKGVLRA
KVSLDREQQSSYVLWVEAVDGGDPALSSTAKITILLLDINDNPPLVLFPQSNTSYLLVLP
STLPGSPITEVYAVDKDTGMNAVIAYSIIGRRGPRPESFRIDPKTGNITLEESLMQNDYG
LYRLLVKVSDHGYPEPLHSTVMVNLFVNDTVSNESYIESLLRKEPDINIEEKEPQISIEP
THKKMESPSCVPTLVALSIISLGSITLVTGMGIYICLRKGKKHHRADENLEVQIPLNGRI
DLHMLEKKPMEISNI
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgcgactattggctgaagttctcccagcgatttgcatgaagagcgaggggcgt
gtcttctgctgccttcccaccaggagcgaaatgactgcagcttcagtgggaatgaactgc
caagggacgggcaggcgctcgcaagcccgaggaacaagctggctcccgaggagcaggcac
cggcagccggagatggggcacctccgcggcgcggggcgcgccaccagccccagaaacctg
cagcatttgttccttttcctgctcttcatcggccctttcaactgcttcgccagttacagc
cgcgccaccgagctcttctacagcctcaacgaggggctgccggccggggtgctcatcggg
agcctggcacaggacctgcggctacatggagtggctgcagaggggccgccaacccgtcgc
agggagcctgtgctctccttcagcctggcctctcaggggttgggcggccagtacgtgagc
ctggacaaccgttcgggggagctgcacacctcagccctgcagatcgaccgtgaggcgctg
tgcctggagactggcgtcggctcacctgcctctctgctgtcgccatcctcagagccctgc
ctgctgctgctggacgtgctggtgctgcctcaggagcacttccgcctcgtgaaggtgaag
attgccatccgtgatgtcaatgacaatgcgccacacttccccgtgcccaacatgcgcctc
tgggtgcctgagaatgcccccatcgacacccgcctggccatagagcacccggccctcgac
cctgacctgggtaccaatgcggtccagacctatcgcctgcaggatgactatggggtcttc
accctggatgtggaggagaatgagagcggggagaggaccccctacttgattgttatgggg
gccctggacagggaggccagagaggagtatgtcaccctcatcatcgcagaggatgggggg
accccaccgttgctgggcagtgccaccctcaccattggcatcagtgacatcaacgacaac
tgcccccagttcagcgactcccaactcaatgtcaccgtctatgggaattccagtgcaggg
acacacgtggccaccatccacgcagttgacatggacctgggatccaatgcccaaatttct
tactcttacagtcaaaaagtcccccagccatcaagagacttattccacctggacgaaagt
acaggagcgatcaagctctccagtaaaatcgatggtgatgctccccggctccatagattg
actatattggccaatggtcctggttgtatccctgctgtgatcactgtgctggtgtccatc
atcaaagtcatgttgagaccccctgaagtggtccctcgttttatagctaatgaagtggaa
ggtgtggtttacttgaaagaattggagcctgttaacacaccgatagcattttttaccata
aaagacccagatgaaaaatataaagtggattgctttttggatggcaatgggccattcaaa
ctgtcaccatacaaaccatacaacaatgaatatttattagagactacaaggcctttagac
tacgaggtacagcagctctatgaaatatcagtggttgcatggaactcagagggatttcat
gtaaacaagataattaaagtgcaggttctggatgataacgacaactcaccagttttccct
caacaattaatagaattatctattgaagaaaataatgctcccaatgcttttttgaccaaa
ttgcatgcaacggatgctgacagtggagagagagggaaagtctcctattttctagggcct
gatgccccttcatatttttctttagataaaactacaggtgttcttacagtttccactcag
ctggacagagaagaaaaagagaaatacagatattctgttaaagcaatagattctggattg
cctcccagagaatcgatagtgactgtcaccatcacagtgttggataaaaatgacaatagt
cccagatttatcaataaggatttcagtttttttgtaccagaaaactttcctggttttggg
gaaattggagttatcagtgttacagatgctgatgcagggcaaaatggatgggtagccctt
tcagttgtaaatggaagtgatatttttgtgatagacactggcaaaggagttttgagagct
aaggtctccctcgacagggagcagcaaagttcctatgtcttgtgggttgaagctgttgat
ggaggtgaccctgccctgtcttctactgctaaaataactatccttcttctggacattaat
gacaaccccccactggtcttgtttcctcagtctaatacgtcttatttgttggtacttcct
tctactcttcctggctctcccatcacagaagtctatgctgtagataaagacactggcatg
aatgctgtcatagcttacagcatcataggtagaagaggtccacgacctgaatcatttagg
attgaccctaaaactggtaatatcaccttggaagagtcactgatgcagaatgactatggt
ctctaccggctactggtaaaagttagcgatcatggctatccagagcccctccattccaca
gtcatggtgaacctttttgtcaacgacacagtgagcaatgagagctatattgaaagtttg
ttaagaaaggagcctgacattaatatagaggaaaaagagccacaaatatctatagagcct
acgcataaaaaaatggagtcaccatcttgcgtgcctaccttagtagccctgtcaataata
agcttggggtcaatcactttagtaactgggatgggcatttacatctgtttacggaaaggg
aaaaagcatcacagagcagatgaaaatttggaagtacaaatcccactaaatggaagaatt
gaccttcatatgttggagaagaaaccaatggagatttctaatatttaa
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