KEGG   Chelonia mydas (green sea turtle): 102932063
Entry
102932063         CDS       T02989                                 
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    102932063 (PCDH20)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cmy01009]
    102932063 (PCDH20)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cmy04515]
    102932063 (PCDH20)
Protein phosphatases and associated proteins [BR:cmy01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102932063 (PCDH20)
Cell adhesion molecules [BR:cmy04515]
 Cadherins
  Protocadherins
   102932063 (PCDH20)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_CELSR2_9th SGBP_BT4661-like
Other DBs
NCBI-GeneID: 102932063
NCBI-ProteinID: XP_037750949
LinkDB
Position
1:complement(68518231..68524507)
AA seq 975 aa
MRLRLLAEVLPAICMKSEGRVFCCLPTRSEMTAASVGMNCQGTGRRSQARGTSWLPRSRH
RQPEMGHLRGAGRATSPRNLQHLFLFLLFIGPFNCFASYSRATELFYSLNEGLPAGVLIG
SLAQDLRLHGVAAEGPPTRRREPVLSFSLASQGLGGQYVSLDNRSGELHTSALQIDREAL
CLETGVGSPASLLSPSSEPCLLLLDVLVLPQEHFRLVKVKIAIRDVNDNAPHFPVPNMRL
WVPENAPIDTRLAIEHPALDPDLGTNAVQTYRLQDDYGVFTLDVEENESGERTPYLIVMG
ALDREAREEYVTLIIAEDGGTPPLLGSATLTIGISDINDNCPQFSDSQLNVTVYGNSSAG
THVATIHAVDMDLGSNAQISYSYSQKVPQPSRDLFHLDESTGAIKLSSKIDGDAPRLHRL
TILANGPGCIPAVITVLVSIIKVMLRPPEVVPRFIANEVEGVVYLKELEPVNTPIAFFTI
KDPDEKYKVDCFLDGNGPFKLSPYKPYNNEYLLETTRPLDYEVQQLYEISVVAWNSEGFH
VNKIIKVQVLDDNDNSPVFPQQLIELSIEENNAPNAFLTKLHATDADSGERGKVSYFLGP
DAPSYFSLDKTTGVLTVSTQLDREEKEKYRYSVKAIDSGLPPRESIVTVTITVLDKNDNS
PRFINKDFSFFVPENFPGFGEIGVISVTDADAGQNGWVALSVVNGSDIFVIDTGKGVLRA
KVSLDREQQSSYVLWVEAVDGGDPALSSTAKITILLLDINDNPPLVLFPQSNTSYLLVLP
STLPGSPITEVYAVDKDTGMNAVIAYSIIGRRGPRPESFRIDPKTGNITLEESLMQNDYG
LYRLLVKVSDHGYPEPLHSTVMVNLFVNDTVSNESYIESLLRKEPDINIEEKEPQISIEP
THKKMESPSCVPTLVALSIISLGSITLVTGMGIYICLRKGKKHHRADENLEVQIPLNGRI
DLHMLEKKPMEISNI
NT seq 2928 nt   +upstreamnt  +downstreamnt
atgcgcctgcgactattggctgaagttctcccagcgatttgcatgaagagcgaggggcgt
gtcttctgctgccttcccaccaggagcgaaatgactgcagcttcagtgggaatgaactgc
caagggacgggcaggcgctcgcaagcccgaggaacaagctggctcccgaggagcaggcac
cggcagccggagatggggcacctccgcggcgcggggcgcgccaccagccccagaaacctg
cagcatttgttccttttcctgctcttcatcggccctttcaactgcttcgccagttacagc
cgcgccaccgagctcttctacagcctcaacgaggggctgccggccggggtgctcatcggg
agcctggcacaggacctgcggctacatggagtggctgcagaggggccgccaacccgtcgc
agggagcctgtgctctccttcagcctggcctctcaggggttgggcggccagtacgtgagc
ctggacaaccgttcgggggagctgcacacctcagccctgcagatcgaccgtgaggcgctg
tgcctggagactggcgtcggctcacctgcctctctgctgtcgccatcctcagagccctgc
ctgctgctgctggacgtgctggtgctgcctcaggagcacttccgcctcgtgaaggtgaag
attgccatccgtgatgtcaatgacaatgcgccacacttccccgtgcccaacatgcgcctc
tgggtgcctgagaatgcccccatcgacacccgcctggccatagagcacccggccctcgac
cctgacctgggtaccaatgcggtccagacctatcgcctgcaggatgactatggggtcttc
accctggatgtggaggagaatgagagcggggagaggaccccctacttgattgttatgggg
gccctggacagggaggccagagaggagtatgtcaccctcatcatcgcagaggatgggggg
accccaccgttgctgggcagtgccaccctcaccattggcatcagtgacatcaacgacaac
tgcccccagttcagcgactcccaactcaatgtcaccgtctatgggaattccagtgcaggg
acacacgtggccaccatccacgcagttgacatggacctgggatccaatgcccaaatttct
tactcttacagtcaaaaagtcccccagccatcaagagacttattccacctggacgaaagt
acaggagcgatcaagctctccagtaaaatcgatggtgatgctccccggctccatagattg
actatattggccaatggtcctggttgtatccctgctgtgatcactgtgctggtgtccatc
atcaaagtcatgttgagaccccctgaagtggtccctcgttttatagctaatgaagtggaa
ggtgtggtttacttgaaagaattggagcctgttaacacaccgatagcattttttaccata
aaagacccagatgaaaaatataaagtggattgctttttggatggcaatgggccattcaaa
ctgtcaccatacaaaccatacaacaatgaatatttattagagactacaaggcctttagac
tacgaggtacagcagctctatgaaatatcagtggttgcatggaactcagagggatttcat
gtaaacaagataattaaagtgcaggttctggatgataacgacaactcaccagttttccct
caacaattaatagaattatctattgaagaaaataatgctcccaatgcttttttgaccaaa
ttgcatgcaacggatgctgacagtggagagagagggaaagtctcctattttctagggcct
gatgccccttcatatttttctttagataaaactacaggtgttcttacagtttccactcag
ctggacagagaagaaaaagagaaatacagatattctgttaaagcaatagattctggattg
cctcccagagaatcgatagtgactgtcaccatcacagtgttggataaaaatgacaatagt
cccagatttatcaataaggatttcagtttttttgtaccagaaaactttcctggttttggg
gaaattggagttatcagtgttacagatgctgatgcagggcaaaatggatgggtagccctt
tcagttgtaaatggaagtgatatttttgtgatagacactggcaaaggagttttgagagct
aaggtctccctcgacagggagcagcaaagttcctatgtcttgtgggttgaagctgttgat
ggaggtgaccctgccctgtcttctactgctaaaataactatccttcttctggacattaat
gacaaccccccactggtcttgtttcctcagtctaatacgtcttatttgttggtacttcct
tctactcttcctggctctcccatcacagaagtctatgctgtagataaagacactggcatg
aatgctgtcatagcttacagcatcataggtagaagaggtccacgacctgaatcatttagg
attgaccctaaaactggtaatatcaccttggaagagtcactgatgcagaatgactatggt
ctctaccggctactggtaaaagttagcgatcatggctatccagagcccctccattccaca
gtcatggtgaacctttttgtcaacgacacagtgagcaatgagagctatattgaaagtttg
ttaagaaaggagcctgacattaatatagaggaaaaagagccacaaatatctatagagcct
acgcataaaaaaatggagtcaccatcttgcgtgcctaccttagtagccctgtcaataata
agcttggggtcaatcactttagtaactgggatgggcatttacatctgtttacggaaaggg
aaaaagcatcacagagcagatgaaaatttggaagtacaaatcccactaaatggaagaatt
gaccttcatatgttggagaagaaaccaatggagatttctaatatttaa

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