Chelonia mydas (green sea turtle): 102932105
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Entry
102932105 CDS
T02989
Symbol
CDRT1
Name
(RefSeq) CMT1A duplicated region transcript 1 protein
KO
K10266
F-box and WD-40 domain protein 10
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmy04121
]
102932105 (CDRT1)
Ubiquitin system [BR:
cmy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102932105 (CDRT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
EIF3I
Beta-prop_SCAP
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EML
F-box
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
F-box-like
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_like
Beta-prop_SPT8
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
102932105
NCBI-ProteinID:
XP_037770317
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All DBs
Position
14:complement(21809118..21843779)
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AA seq
1139 aa
AA seq
DB search
MMKETSKDLESLEYRLDSAPVLRCEKKTDLVPVCQICETCVLAWRVFSTKEWFLRASDVS
QRKFLVGIVKRLNSLDLLNYAEKVLQTSHGKDFTFSRSRTSFKEDTTTSASDWILNTAML
EQAMLETWRWFKTSSYWTKANYTLLLFQMCNPKLLFMAASLVREQSASSKKETEDEEDKF
TVAFTETQSSFKLQEHTESSSQVQLQPTSQSFLTSSTALESGVSSEGTSQFSETGIGAQR
QIPCFWPRDLAHIYCARAASEDEDTSTVSSIDPALAVVPASFQSASSVNKYKDFIRCLPT
HLSKYILGFLDTKSLNRCTSVSHHWAFLVKDVKQEHLSHSLVLEEIVYLQGSCPRGAFPS
YAKMTIVVIPRITKDGEIIPARSHRWKRRGKEENNLQGAYHGQMTETVQLEERNIFCGSY
NVRVLTDQSDPRRVIHYSGGNLLAIGSADHKVRFLNVLELKEVPPVISGHAGSIKAVFLN
EKKGFVLSASFDLSIRCWNIFTGACVKILNGHTGTITCLDMYKNRIVSGARDCMVKVWDL
NSGRCIKTLKHKDAIWTAKINNTHIVSGCEKGLVKVWHADTCVLIKTLEGHQGPVKCLAF
DQWHLVTGSSDGFVLGWSMVGKHKRCLMAFRHPQEVLYLAFLYLRVISGCADGKIRIFNF
LTGTCLKVMRANSRGDPVVSFCIVENRMVINALSSILMFQFEDVEWDYTLQADREEVTKA
KEKHNEIRVRMLPYPYVHSRHVKHDVDSHRKTLYSEEKPDEDQIMLAYLIRRRSTRDCGT
PLGLRYEFVKAPAPWPSQTLQRSMGCLDVKPDQKKRFSLPGRRQVYSSDSEDSGQTYGAV
TPQSLSESDSESGYDSPVHAPSLAENAKASLQRIKKRGPHCPISPDQILLTVSTLQHAYK
QDQVSSNMMHHTKIRDAWGPSLLLQEHPKEKTYKIPKQEKKDQSTQLRHIKSASGSLIMK
RISTPFETKRLQLNLKNSLHGSAVHSFIPAPVIVRSKSCCSLPEEKKVHTGHGRATSRSE
GGAQLIGHLTSSSESIQSTRMMIAQTKIEAGIQRESPFFLQTTNPYRMNTGFRLLTVKQM
KMYEEATAVEYQAHRKKYIADQQKECRKAWLKKIKGLPIDNFTKEGKIAAPELGLNVYV
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagagacctcaaaggacctggagagcctggaatacaggctggactctgctcct
gttctgcggtgtgagaagaaaacagatttagtgcctgtttgccaaatttgtgagacatgt
gtcttggcttggagggtcttctctaccaaagagtggttcctgcgggccagcgatgtctcc
caaaggaagttcctggtggggatcgtgaagcgactcaacagcctggatttgctaaactat
gctgagaaagtcctgcagacctcccacgggaaggatttcactttcagccggtcccgaacc
agcttcaaagaagacacgaccacatctgcttctgactggattttaaatacagcaatgcta
gagcaagccatgttggagacctggaggtggttcaaaaccagttcctactggactaaagca
aactacactctgctcttgtttcagatgtgtaaccctaagttactgtttatggctgctagc
ctggtcagagaacagagtgccagctcaaaaaaagaaacagaggacgaggaagacaaattc
actgtggccttcactgagacccaaagcagcttcaagctacaggaacacacagaatctagc
tctcaggtgcaattgcaacccacatctcaatccttcctgacttcttccacagccctagaa
agtggggtctcatcagaaggaaccagccagtttagtgaaacaggcataggtgcccaaagg
cagataccgtgcttctggcccagagacctggcgcacatctattgtgcgagagctgcgtca
gaggatgaggatacatccaccgtgtcttcaatcgacccagccctcgccgttgtccctgca
tctttccagtcagcctccagtgtcaacaagtacaaggacttcatccgctgcctgccgacc
cacctgtccaagtatatcctggggtttctggatacaaagagcctgaacaggtgcacttct
gtgagccaccactgggctttcctggtcaaagacgtcaagcaggaacatctgtcacatagc
ctagtcctggaagagatcgtgtacttgcaggggtcgtgtcctaggggagcatttcccagc
tatgctaaaatgaccatcgttgtaattccaaggataactaaagatggagagatcatccca
gcaagaagccacagatggaaacgcagaggaaaggaggagaacaacctacagggggcttat
catggccagatgactgaaactgtccagctggaggagagaaacatcttctgcggctcctac
aatgttcgtgtccttacagaccagtcagatccacgcagggtaatccactacagtggtggg
aacttacttgccattggctcagcggaccacaaagtcaggttccttaacgtgttggagctg
aaggaagtgccacctgtgatcagtggccatgctgggagcatcaaggcagtgttcctcaac
gagaagaaagggttcgtgctgagtgccagctttgatctcagcatcagatgctggaatata
ttcactggggcttgtgtgaagatccttaacggtcacacggggaccatcacttgcctggac
atgtacaaaaacaggattgtgtcaggagcaagagattgcatggtcaaagtgtgggattta
aactccgggcgatgcatcaaaactttaaaacacaaagatgccatttggacagctaaaatc
aacaacacccacattgtgagcggttgcgaaaaagggttggtgaaagtgtggcacgctgat
acgtgcgtgttgatcaagaccttagaagggcaccaaggcccagtaaaatgcctggccttt
gatcaatggcatctagtgacaggaagctctgatggatttgtcctgggatggagcatggtg
ggaaaacataagagatgtctaatggctttcaggcacccacaggaagtcctgtatctggcg
tttctgtatctccgagtcatcagtggctgcgctgatggaaaaatacgtatatttaacttc
ctgactgggacctgcctgaaggtgatgagggccaatagcagaggtgaccctgtggtgtcc
ttctgcattgtagaaaataggatggtgatcaatgctctgagcagcatattgatgttccag
tttgaggatgtagagtgggactacacgctacaggccgaccgagaggaagtaacaaaggct
aaggaaaagcacaatgaaatcagggtcagaatgctgccctatccctatgttcactctcgg
cacgtgaaacatgatgtagacagccacaggaagacactttattccgaggagaaaccagat
gaggaccagataatgttggcatacctgattcgccgtcggtcaacaagggattgcgggaca
cctttaggtcttcgttatgaatttgtgaaggcacctgctccctggccaagtcagactttg
caaaggagcatgggttgccttgatgtaaaaccggaccagaagaaaaggttctctcttcct
gggagacgacaggtctatagcagtgattcagaggactcaggtcaaacatatggtgcagta
acaccacaaagcttgtctgaatccgatagtgaatctggctacgactctccagtccatgca
ccttcacttgctgaaaacgctaaggcctctttacagcgtataaagaaacgaggcccacat
tgtcccatatctcctgaccagatcctcctgactgtcagcacgctgcagcacgcctacaag
caggaccaagtcagctccaatatgatgcaccatacaaaaatcagggatgcctggggacct
tcgctgctcctccaggaacaccctaaagagaagacatacaaaatccctaagcaagagaaa
aaggatcagtcaacccaactcagacacattaaatctgccagtggctctctgattatgaag
agaatttccacaccctttgaaaccaaaagattgcagctcaatttgaagaactctttgcat
gggtccgcagtccactctttcattcctgctcccgtgattgtacgctccaagtcatgctgc
agcttgccagaagagaagaaggttcatactggccatggcagagccacttcccgatctgag
ggtggggctcagttgattggccacttaacaagctcatctgaatccatccaatcaacacgc
atgatgatcgcacaaactaaaattgaagcagggatccagagagaaagtcccttcttctta
caaaccacaaatccttaccggatgaataccgggttcaggcttctgacagtgaagcagatg
aaaatgtatgaagaagctacagctgttgagtatcaagctcaccgaaaaaaatatatagca
gaccagcaaaaagagtgcaggaaggcctggttaaagaaaattaaaggcctccccatagac
aatttcacgaaggagggaaaaatagctgcccccgaacttgggcttaatgtgtatgtctga
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integrated database retrieval system
