Chelonia mydas (green sea turtle): 102932137
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Entry
102932137 CDS
T02989
Symbol
CSTF1
Name
(RefSeq) cleavage stimulation factor subunit 1
KO
K14406
cleavage stimulation factor subunit 1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102932137 (CSTF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102932137 (CSTF1)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
102932137 (CSTF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
CSTF1_dimer
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_NOL10_N
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_VPS8
ASA1
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
PAC11
Beta-prop_Aladin
CFAP251_N
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_NWD2_C
DSE1_N
Beta-prop_NUP159_NUP214
PROPPIN
Beta-prop_WDR11_1st
Beta-prop_WDR75_2nd
Frtz
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
102932137
NCBI-ProteinID:
XP_007059826
LinkDB
All DBs
Position
13
Genome browser
AA seq
489 aa
AA seq
DB search
MAARTGVRRMSGRRVPSVCDRRPLPRGLSNVVSPAPEPRPLRLPFLEAEAPARHSLLTMY
RTKVSLKDRQQLYKLIISQLLYDGYINIANGLINEIKPQSVCAPSEQLLHLIKLGMENDD
SAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQL
IATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFH
PTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLR
LYDINTFQCFVSCNPQDQHTDAICSVNYNASANMYVTGSKDGCIKLWDGVSNRCITTFEK
AHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVKYTGAGLSGRQVHRTQAVFN
HTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNSIVRCIVHSPTNPGFMTCSDDYRAR
FWYRRSTTD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaggacaggtgtgaggaggatgtcaggccgtcgtgttccctcagtgtgtgat
agacgtccgcttccacggggcctgagtaacgtggtctcccccgctcctgagccacggcca
ctgcggctgcctttccttgaggctgaggcacccgcaaggcattccttgctcacaatgtat
agaacaaaagtaagcttgaaagatcgtcaacaactttacaaactgattattagtcagttg
ctgtatgatggatacataaacattgccaatggcctgataaatgagataaaaccacaatca
gtctgcgcaccatctgaacaactgctgcatctgattaaactaggaatggagaacgatgac
agcgcagttcagtatgcaattggacgctctgatacagtagctccaggaacagggattgac
ttagaatttgatgcagatgtccagactatgtcccccgaggcttctgaatatgagacctgt
tacgtcacatctcataaaggaccatgtcgcgtagctacatatagcagagatgggcagtta
atagctacaggatctgctgatgcctcaataaaaattcttgatacagagagaatgttggca
aaaagtgctatgcccatcgaggtcatgatgaatgagacagcacagcagaacatggaaaat
catcctgttattcggactctatatgatcatgtggatgaggttacatgtttagctttccat
ccaacagaacagatcctggcatctggttcaagggactatacgcttaaattgtttgactat
tcaaaaccttctgccaaaagagccttcaagtatatccaggaagcagaaatgttacgctcc
atctcttttcatccttctggtgacttcatacttgttggtacccagcaccctaccttacgg
ctttatgatatcaatacattccagtgttttgtgtcttgcaatcctcaagatcaacacacc
gatgctatatgttcagtaaactataatgcaagtgctaacatgtatgtgacaggaagcaag
gatggatgcatcaaattatgggatggtgtttcaaatcgatgtatcactacttttgagaaa
gcacatgatggggctgaagtctgttctgccatcttttccaaaaattcaaagtacatcctg
tcaagtggaaaagattctgtagctaaactatgggagatatccacaggtcgaacgctggtc
aaatatacaggagctggtttgagtggacgacaagtacacagaacacaggcagtctttaac
cacacagaggactatgtgttactgcctgatgaaaggaccataagtctctgctgctgggac
tcaagaactgcagaacggcgaaatcttctgtcattggggcataacagcattgtccggtgt
attgttcattctcctaccaatcctggtttcatgacatgcagtgatgactacagagctcga
ttttggtaccgaaggtcaaccacagactaa
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