Chelonia mydas (green sea turtle): 102932142
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Entry
102932142 CDS
T02989
Symbol
SNAPC4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmy03000
]
102932142 (SNAPC4)
03021 Transcription machinery [BR:
cmy03021
]
102932142 (SNAPC4)
Transcription factors [BR:
cmy03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
102932142 (SNAPC4)
Transcription machinery [BR:
cmy03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
102932142 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
SLIDE
Motif
Other DBs
NCBI-GeneID:
102932142
NCBI-ProteinID:
XP_037735389
LinkDB
All DBs
Position
16:19149113..19181716
Genome browser
AA seq
1592 aa
AA seq
DB search
MAHYLGPAGDLLREREVMSPVDLHAEREKIRREIEELEKSLDPAIPSIEVLVSDSSLDSD
SDVDDLDDDDSDAHTEMEVEKEGGSSDDDDIDNNLPADPETCLQMNLVYQEVIQEKIEEV
NLLIAQNKEQQKEIMCEVGGPKMTKAGDGKLLPLNMFLGHFMKPYFKDKVSGIGPPANED
TREKTAQGIKSFEELLIKKWKSREKSLLNKSVISDRLQRLLQPKLLKLSYLNQKLEKAKS
EMEKKILEKQVKEAEREIEEINHLPEEALLGNRLDEHDWEKISNINFDGSRNAEELRKFW
QNWEHPTINKREWNEEEIEKLKEIAAKHNCLDWQTIAQELGTNRSAFQCLQKFQAYNKDF
KRKEWTKEEDQMLLQLVQEMRVGSHIPYKKIAYYMEGRDSMQLIYRWTKSVDPSLRKGFW
TPEEDAKLLAAVAKYGERDWYKIRTEVPGRSDAQCRDRYLNALHHDVKKGRWSLDEEEKL
IELVEKHGVGHWTKIASELPHRTGSQCLSKWKAMIGAKKKSGPRKRLQKRRRVRRHSSSS
SESSSEDSEPELMDSSEGEIDPPSGFRGTVPSLDLWIPTRTDPAKCWKAKHLIPSLYCSK
SALVKGQLKRIPATSFGGGRDRVPTDSAGISTILKGIGCPPSTDINLKDPEELVKEAFIR
GKQVLKVTLEDVRRVLRNNTYSQRKCEDGLRKPCVPSSAVVSGVTPGTSVGQVLQGLQNT
MEKQYRRQREQFQRKKLERRLLMAVTPWVGNVLLPCAFRAERVASRQTKALVIQEQLQTV
TLGSTPVFALFIQLFQIDTSGCMKVIRERKMRQSDLIKAMAGNARRLQQPSCSSKNSSGS
PAQSRSQKAAGKGRARRPIALKAKENPAAVSAGVPTLPTPRQKPKTVSELLREKRLRESR
AKKALQRTVILAPQVLVSPSVIIQHPVQQVIPAPQRGSELQTAGLAGSRNAQAACVPVPL
PAFTPVVASVPSPKPVGSHSSPAPESAESACSSERRAKSERELNEGALGDVSKGEASQDR
PMGAGENGLSQGCKKAQAFGGSSAPVVLQNHAFVPHQIALMPSSAISLNPAAMKSGPKET
SPSTSTTCAPALVRSQQNAINLLPAILAPQRGSHVVPKNIMPITWVVTPQGLIPTSVQAL
VSVHSQGKQPAAGIIGSAAKNQSRTGDTSAPRMPLMPAEASHPPIRCTGAQVLSPQLAEG
APSEKTVCLNPSTRPSSITSLDPGHSSPSVSPPAPASLNSLSRMSDSSGERSATPMNLPD
EGAALHPSPVLLPQVKPPASTPWADQLCLPSLPGPGESNNCNMLTGVASNPKVLLEGSLV
QRPDRLLACNNTVENSDSPGAQVTRNRPIFPKPQSTPNVDNPPGLPTPSAEKNLLDVSLL
SLEDEALVKEWLRGKRGIPVAPLETSLAYFPPFLCNLKTLSRLLLQKKTLEQRVSCLRTS
EERRDGGAGADLPAVRQLVWQKLGDNPAYLLLKARFLAAFTLPAVLATLPPPTVTTTLSS
SWQQCSESDEEESPTDKELMEAESCGKGPAKVPLDSTAGIVPGSEDADITHQGAGAEVPT
VQSVSGSCADVGEARVLRTRRSARFRKRRRQT
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atggcccattacctggggccggctggggacctcctgcgggagcgcgaagtcatgtcgcct
gtggatttacacgcggaaagagagaaaatccggcgggaaatagaggagctagaaaagagc
ttggaccctgctatccccagtatcgaagtcctggtgtcggattccagtctggactcggat
tccgacgtagatgatctggacgatgatgactcagatgcccatactgaaatggaagtagag
aaagaagggggcagtagtgatgacgacgacattgataacaacctcccagcagacccagaa
acatgtttacagatgaacctcgtgtatcaagaagttattcaggaaaagatagaggaagtc
aaccttctgatcgcacaaaacaaagaacagcagaaagaaattatgtgtgaggttggtggt
ccaaagatgacgaaggcaggagatggtaaacttctaccactgaatatgttcttgggccat
tttatgaagccgtacttcaaggataaagtatcaggaattggccctcctgccaatgaagat
acccgagaaaagacagcccaaggcataaaatcctttgaggagctgctcataaaaaagtgg
aaaagcagagagaagagcctgctgaacaaatcagtaataagtgaccgtttgcagcgtctg
cttcagccaaagttactgaagctcagctatttgaatcagaaactggaaaaagccaagagt
gaaatggaaaagaagattttggaaaaacaagtcaaagaagcagagcgtgaaatagaggag
atcaaccatctgccagaggaggccttattaggaaacagactggatgagcatgactgggag
aagatttccaacatcaattttgatggaagtcgcaacgcagaagagctgaggaaattctgg
cagaactgggagcatccgaccatcaacaagagggagtggaatgaagaggagatagagaag
ttaaaggaaatagctgcgaaacataattgtctggattggcaaactatagcccaggagctt
gggacaaaccgaagtgcattccagtgcctgcagaagtttcaagcctacaacaaagacttc
aagaggaaagaatggacaaaggaagaggaccagatgcttctacagctcgttcaagaaatg
agagtaggaagccacataccttacaagaaaattgcttattacatggaaggaagagactct
atgcagctaatttaccgctggacaaagagtgtggatcccagcctaaggaaaggattctgg
acaccagaggaagatgctaagttgttggcagcagttgctaagtatggagagcgtgactgg
tataaaattcggacagaggtaccaggaaggagtgatgctcaatgcagagacaggtattta
aatgcattacaccacgacgtaaagaaaggcagatggagtttagacgaagaagaaaagtta
attgaactggtagagaaacatggtgtgggtcactggaccaaaatagcttctgaattacca
cacagaactggctcccagtgtctaagcaaatggaaagccatgattggggctaagaaaaag
tctgggccgaggaaacgccttcagaaacgcaggcgagtgcggagacacagttccagctct
tcagagagcagcagcgaggattcagagccagagctaatggatagctctgagggcgaaata
gaccctccctcaggattcaggggtacagtgcccagcctcgacctgtggatcccgacgagg
acagatccggccaagtgctggaaagccaaacacttgattccctccctctactgttccaaa
agtgctcttgtaaagggacagttaaaacgaattccagctacatcttttgggggaggcagg
gacagagtcccaactgattcagcagggataagtaccatactgaaaggtattgggtgtcca
ccttctactgacatcaatttgaaggatccagaagaactggtaaaggaggcattcataaga
ggaaagcaagtgttaaaggttaccctggaagatgtgaggagagtgctaagaaataatacc
tattctcagaggaaatgcgaagatgggctacggaagccttgtgtcccctcttcagcagtg
gtttctggagtgacaccaggcacatcagttggccaggtgctgcagggattacagaacact
atggagaaacagtaccgtcgccagagagagcaattccaaagaaagaagctggagaggagg
ctcctgatggcagtgactccgtgggtgggcaatgtcctactgccttgtgcctttagagcc
gagagggtggcgtcccgtcagacaaaagctcttgttattcaagaacagcttcagacagtc
acgctgggcagcactccagtgttcgcactcttcattcagctcttccagattgacactagt
ggctgcatgaaggttattcgtgagaggaagatgaggcagtcggacctcatcaaggccatg
gctgggaatgcaaggagacttcagcagccctcctgcagttccaagaactcttcaggctca
ccagcacagtcccgctcccagaaggccgcaggaaagggaagagccaggagacccatcgcc
ttaaaagcaaaggagaaccctgcagctgtttcggcgggagtccctactcttcccactccc
aggcaaaagcctaaaacagtctcagaattactgagggagaaaaggctgcgggagtccagg
gctaagaaagctttgcagagaacagtgattcttgccccccaggtgttggtttcgccctct
gtgataatccagcaccctgtgcagcaggtaattcctgccccacaaagaggaagtgagctt
cagacagctggactggcaggtagcaggaatgctcaggcagcgtgtgtaccagtgccacta
cctgcatttactcctgttgtggcttctgtcccctctcccaaacctgtcggaagccattca
tctccagccccagaatctgcagagagcgcttgctcctccgagaggagagcaaaatccgag
agagagctcaatgagggagctttaggagatgtgtccaaaggcgaggcttctcaggacaga
cctatgggtgcaggggagaatggcctgtcccaggggtgcaagaaagctcaagcatttggt
ggcagctcagcacctgtagtcttgcaaaaccatgcctttgtgccgcatcagattgcattg
atgccgtcttcagccatttctctgaaccctgccgccatgaagtcaggccccaaggaaacc
tctccctccacatccacgacttgtgccccagccctggtcagatcacagcagaatgcaatc
aatctgttgcctgctatcctagctccccagagggggtctcacgtggttcccaagaacatc
atgcccatcacctgggtggtaacaccacagggtttgatccccacctctgtacaagcattg
gtgagtgttcacagccaagggaagcagcccgcagctgggatcataggcagtgctgccaaa
aatcagagccggactggagacacctctgccccaagaatgccgctgatgccagccgaagca
agtcaccctcccatcagatgcacaggtgcacaagtgctgagcccacagttagcggaaggg
gcaccctcagagaagactgtttgcttaaacccttccactcgtccctcatccataacctcc
ttggatcctgggcacagctcacccagcgtgagtcctccagctcctgcctctttaaacagc
ctctcgaggatgtccgactcctctggagagaggagtgcaactccaatgaaccttccagat
gaaggagcagctctgcaccccagccctgtgttgttgccccaagtgaagcctcctgcaagc
actccgtgggctgaccagctctgcttgccaagtctccctggcccaggcgagagcaataac
tgcaatatgctcaccggggttgcctccaatccaaaagtcctgctggaagggagcctggtg
caaaggccggatcggcttctggcctgtaacaacacagtagagaactcggactctcctggt
gcacaagtaacaaggaacaggccgatcttcccaaagccacagagcaccccaaacgtggac
aacccccctggattgcccacacccagtgccgaaaagaacctcctggacgtcagccttctc
tcccttgaggatgaggctttggtgaaggagtggctgagagggaagcggggcatcccggtt
gccccattggaaaccagcttggcttactttccacctttcttgtgcaacttgaaaacactc
tccaggctgcttctgcagaagaagacgctggagcagcgtgtgtcgtgcctcaggacctct
gaagagcgcagggatgggggtgcaggggctgatctgcctgctgtccgacagctggtgtgg
cagaaactcggcgataaccctgcctatctcctgttaaaagccaggtttttagcagcattt
actctcccagccgtcctagcaactctgcctcctcccacagtgactacgactctctccagc
agctggcagcagtgttcagagagtgacgaagaggagtcccctactgataaggaactgatg
gaggcagaaagctgtgggaaaggaccagccaaagtacctttggatagcacagctggcatt
gtccccgggagtgaggatgctgacatcacccatcagggtgctggagctgaagtgcccact
gtgcagtccgtctcaggctcctgcgctgacgtgggtgaggccagagttctgcgaaccagg
agaagtgctcgcttcaggaagaggaggaggcagacgtga
DBGET
integrated database retrieval system
