Chelonia mydas (green sea turtle): 102932157
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Entry
102932157 CDS
T02989
Symbol
PAN2
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X3
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102932157 (PAN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102932157 (PAN2)
Enzymes [BR:
cmy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
102932157 (PAN2)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102932157 (PAN2)
mRNA degradation factors
3'-5' decay
Pan complex
102932157 (PAN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAN2_N
UCH_1
RNase_T
UCH
WD40_CDC20-Fz
WD40_like
Beta-prop_THOC3
Motif
Other DBs
NCBI-GeneID:
102932157
NCBI-ProteinID:
XP_037739606
LinkDB
All DBs
Position
20:complement(2603109..2632451)
Genome browser
AA seq
1196 aa
AA seq
DB search
MNFEGLDPALAEYAPALHPALDPVLDPHLNPALLQNVELDPEGVPLEGIPVPESVHIMEG
MYSELHTVVSEVGVPVSVSHFDLHEEMLWVGNHGGHATSFFGPALERYSSFQVSSSDDIR
QIQSLENGVLFLTKTNLKYMSRGGLTIFDYLMDESEDVHSLLLTNSSTLLIGGLQNHVIE
IDLNTVQETQKYTVEVPGVTILRQSNRFFFCGHTTGKVSLRDLRTFAAEHEFDAYSGSLS
DFDVHGNLLVTCGFSSRMNGLACDRFLKVYDLRMMRAITPLQVHVDPLFLKFIPTYTSRL
AIISQTGQCQFCEPTGLANPADIFHVNTVGQLIMTFDVSASKQAMVFGDSEGCVHLWADS
PEVTFNAYSRETDFALPCMVDTLPHLDWNQDLMPLSLIPVPLTSDTLLSDWPAANSAPAP
RRAPPVDPEILRTMKKVGFIGYAPNPRTKLRNQIPYRLKELDNEFDSFSQVPESPIGREE
EPHLYMVAKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEP
VRCLVQNHLCQKEFCLGCELGFLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADS
DEATGKVNLGRLIQSWNRFILTQLHQETQEQEAPQAYRGVGSSSFGSSGDSVIGQLCSCE
VENSSMCRCGKETVRVSSTLLFTLSYPESNDKTKDYEFAQILKRSICLEQNTQAWCENCE
KYQPTVQTRNIRCLPDVLVINCEVNSSKEADFWKTQAEYAFKKTVMKKGGLEIPKSKEIS
LGEWKDLGNAEAGHSYTSIEELKNIWIPHSIRMKLTKNKELDVCNWNESDELSSSDDQDS
TYTYDLMATVVHILDSRTGGSLVGHIKVGETYHQRKEGVTHQQWYLFNDFLIEPVDKCEA
VQFDMSWKVPAILYYARRNLHAKYNLTIKNPIEASVLLAEASLARKQRKCHATFIPLMLN
EMPQVGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGIPFID
DYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDVGVKFVGHGLQK
DFRVINLMVPKDQVIDTVYLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTALQL
YRKYLELSKNATDPDDFRKVLKGLYEKGRKMDWKVPEQDSQSSPKNAAVFPAVLTL
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgaaggtctcgaccctgcccttgcggagtatgcacctgctctccacccagcc
ctggatccagtcttggaccctcacctcaaccccgccctgctgcagaatgtggagctggat
ccggagggggtgccattggagggcatcccggtgccagagtcggtgcacatcatggagggc
atgtactcggagctgcacaccgtggtctccgaggtgggggtacccgtctccgtctcccat
ttcgatctgcacgaagagatgctctgggtggggaaccatgggggtcacgccacctcgttc
ttcggcccggccctggagcgctattcctccttccaggtgagcagcagcgatgacatccgt
cagatccagagcctggagaacggcgtcctcttcctgaccaagacgaacctcaagtacatg
tcccggggaggcctgaccatcttcgactacctcatggacgagagcgaggatgtgcacagc
ctgctgctgacaaacagcagcaccctgctgatcggggggctgcagaaccacgtgatcgag
atcgacctcaacaccgtccaggagacccagaagtacactgtggaggtgcccggcgtcacc
atcctgaggcagtccaaccgcttcttcttctgcggacacacgacggggaaggtgtccctg
cgggacctgcgcacctttgcggcggagcatgagttcgacgcctactcgggcagcctgtcg
gattttgacgtccacggcaacctgctggtgacatgcggcttctccagtcgcatgaacggc
ctggcctgcgaccgcttcctgaaggtgtacgacctgcgcatgatgcgggccatcaccccg
ctgcaggtccacgtggaccccctcttcctcaagttcatccccacctacacctcccggctg
gccatcatctcccagacaggtcagtgccagttctgcgagcccacaggccttgccaaccct
gctgacatcttccacgtcaacacggtggggcagctgatcatgacctttgatgtgtcagcc
agcaagcaggccatggtgttcggcgactcggagggctgcgtccacctctgggccgattcg
cccgaggtcaccttcaatgcctactcccgggagactgactttgccctgccctgcatggta
gacaccctgcctcacctggactggaaccaggacctcatgcccctttctctgatccccgtg
ccactgaccagcgatacactgctgtcagactggcctgctgccaactctgcccctgcgccc
aggcgggccccacctgtagaccccgagatcctgcgcaccatgaagaaagtgggcttcatc
ggctatgcaccaaacccaaggaccaagctccggaaccagatcccgtatcggctgaaagag
ctggacaacgagtttgacagtttcagccaggtccctgaatccccaattggccgggaagag
gaacctcacctgtacatggtggcaaagaaatacaggaaggtcacaatcaaatactccaag
ctgggcctggaggacttcgacttcaagcattacaacaagaccctgtttgctggcctggag
ccccacattcccaatgcctactgcaactgcatgatccaggtcctgtatttcctggagccc
gtccgctgcctggtccagaaccacctgtgccagaaggagttctgcctgggctgtgaactg
ggctttctcttccacatgctggacttgtcccgtggggacccgtgccagggaagcaacttc
ctgcgtgccttccgcaccatcccagaggcgtccgccttgggcctgatcctggccgactcc
gatgaggccacgggcaaagtgaacctgggccggttgatccagagctggaaccgcttcatc
ctgacgcagcttcaccaggagacccaggagcaggaggcaccgcaggcctatcggggtgtt
ggcagcagcagctttgggtcatcgggggactcggtgatcggacagctctgcagctgcgag
gtggagaactccagcatgtgccgctgtgggaaggagacggtgcgagtctcctccacgctg
ctcttcacgctttcctaccccgagagcaacgataaaaccaaagattatgagtttgcccag
atcttaaagaggagcatctgtctggagcagaacacccaggcctggtgcgagaactgtgag
aagtaccagcccacggtccaaacacggaacatccgctgcttgcccgatgtcttagtcatt
aactgcgaagtgaacagctccaaggaggccgatttctggaagacacaggcggagtatgcc
tttaaaaaaacagtgatgaagaaaggaggcctcgaaatccctaagagcaaagagatctct
cttggagaatggaaggacctggggaacgccgaggcggggcactcgtacacctccatcgaa
gagctgaagaacatctggattccccattccatccggatgaaactgaccaagaacaaggag
ctggatgtctgcaactggaacgaaagcgacgagctcagctcatccgatgaccaggactca
acctacacgtacgatctgatggccaccgttgtccacattctggactcccgcaccgggggc
agcctggtggggcacatcaaagtaggggagacgtatcaccaaaggaaagagggggtcacg
caccagcagtggtatctcttcaatgatttcctcatcgagccggtggacaagtgtgaggcg
gtgcagtttgacatgagctggaaggtgcctgccatcctgtactacgcccgaaggaacctc
cacgccaagtacaacctgaccatcaagaacccgatcgaggctagcgtgctgctggccgag
gcgtccctggctcgcaagcaacgcaagtgccacgccaccttcatcccgctcatgctgaat
gagatgccccaggtgggcgacctggtggggctggacgccgagttcgtcacgcttaacgag
gaagaggcagagctgcgcagtgacggcaccaaatccaccatcaagcccagccagatgtcc
gtggctaggatcacgtgcgtgcgaggccagggccccaatgagggcattcccttcatcgat
gactacatctccacccaggagcaggtggtggattacctgacccagtactcaggaatcaag
ccgggcgacctggatgccaagatctcctccaagcacctcaccacacttaagtccacctac
ctgaaactgcggttcctcatcgatgttggggtgaaattcgtgggccacgggctgcagaag
gacttccgggtcatcaacctcatggtgcccaaggaccaggtgattgataccgtgtatctg
ttccacatgccgaggaagaggatgatttctctgcgcttccttgcctggtacttcctggac
ctgaagatccagggcgagactcacgacagcattgaggacgctcggacggccctgcagctc
tacaggaagtacctggagctgagcaagaacgccacggacccggacgacttccgcaaggtg
ctcaagggcctctacgagaagggccgcaagatggactggaaggtgccagagcaagacagc
cagagcagccccaaaaatgctgcggtgttcccggccgtgctaacactctga
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