Chelonia mydas (green sea turtle): 102932158
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Entry
102932158 CDS
T02989
Symbol
ABCA4
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102932158 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmy02000
]
102932158 (ABCA4)
Transporters [BR:
cmy02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102932158 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
Motif
Other DBs
NCBI-GeneID:
102932158
NCBI-ProteinID:
XP_043377445
LinkDB
All DBs
Position
8:72546772..72649976
Genome browser
AA seq
2351 aa
AA seq
DB search
MSFLRQVRLLLWKNWTLRKRQKLRFLVELAWPLSLFLVLVWLRKANPVYRQHECHFPNKA
MPSAGTLPWLQGIFCNMNNPCFRSPTRGESPGIVSNYNNSILARVYQDAQELLLQASEIH
DLGRIWEELRIMIQFMETMRTNPERIAGRGLRIRDFLKEEETLTSFLLNDAGLSDSVVFQ
LINSQVRPEQFAYGVPDLTLKDIACSQTLLNRFIIFSSQRGMHAVYNAMCALSQENLQQI
EDSLYANVDFFKLFQLLPNVLDSKAQGVDLRSWGRVLSNVSQAVRELARRPSIQDLLLVL
QPFVQGGGPESFSHLMSALSSLLCGYPEGSGSRIFSFNWYEDNNYKAFLGVDSTKKESIY
FYDNTTTPFCNALIQSMESNPLTKIAWSAVKPLLMGKILFAPDSPAVRQILKNANSTFEE
LERLRLLTKAWEEVGPQLWHFFQSSLQMNMIRNTLKNPTVRHFLNGQLVAEGLTAEDVIN
FLHNGCPENREEGVADFDWRNIFNVTDQALRLFNQYLECLTLDKFEGHADETQLTHQALN
MLEENKFWAGVVFPDIHSEASKLPPHVNYKIRMDIDAVEKTNKIKDRYWDPGPRADPVDD
LRYIWGGFAYLQDMIEHGIIKTQTNAEVPSGIYLQQMPYPCFVDDIFMITLNRSFPIFMV
LAWIYSVSMIVKSIVLEKEMRLKEAMKNRGVTNGVIWYTWFLDSFIMMSVSVSLLTALIT
CGKVLHYSNPLILLLFLLTFTTATIMQCFLLSTFFSKANLAAACSGVLYFTLYLPHVVCF
AWQDRMTINLKIMASLLSPVAFGFGTEYLSRYEEQGVGLQWNNIRTSPLEGDEYSFFFSI
EMMLFDALLYGMLTWYLENVFPGEYGIPRPWYFPLQESYWFGSGYPKAENTATADEKSPR
KEGSPAWKAPGQEKTAIMREEADEPEKLEEQSDNQREKDGKESKCKHKRKKERAKQGKPK
AEAKDKDEMTSKETEREQPEWSLLCLELDVNTFFEPEPPDLIPGVCAQNLVKIFAGRPKP
AVDGMNVTFYEGQITAFLGHNGAGKTTTISILTGLFPPTSGTVLVGGKDIQMHMDSIRQS
LGMCPQYNILFNHLTVAEHILFYAQLKGRSREEAVLEMEMMLEDIGLPHKRNEEAQNLSG
GMQRKLSVAIAFVGEAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIILSTHHMDEAE
ILGDRVAIISQGKLFCSGSPVFLKNCFGSGFYLTLVRKMKNTQGGGEWSSHSPSCGSQCS
CSCSRCAPKDTAEGPEQELDGDVNELTELIHHHVPEAKLIESIGQELIYLLPSKDFKQRA
YASLFRELEETLADLGLSSFGISDTPLEEVFLKVTADADPGSQNAGGAQENGFTLRKTCI
EQKEKAEQPPLETNGASRTPAGQTGDGSEGKGSRQNKGSQLVRQQIKALLIKRFHRATRS
RKDFLAQIVLPATFVLLALILTVIIPPFGEYPSLILHPWIYGYQITFFSNEQPGSEQMVS
LTDAFLNKPGFGNRCMKEEPLRDYPCSNMSTAWRIPHIPPNITNLFLTHKWSPDDPSPSC
SCSTRKKLTMLPECPAGAGGLPPPQRVQRSTEILQDLTHRNISDFLVKTYPSLIRESLKS
KYWVNEQRYGGISIGGKLPVLHVTGDQIVDFLRDLGQMMNITGGQAAMSVAKEMSNFLKY
METEDNIKVWFNNKGWHAMVSFLNVANNAVLRANLRQGQAPEEYGITAINHPLNLTKEQL
SEVTVLTTSVDVVVAICVIFAMSFIPASFVLYLIQERVTKAKHLQFVSGVSPAVYWLTNF
IWDIVNYTLSAGMVVGIFIGFEKKAYTSPSNLPVLIALLLLYGWAVIPMMYPASYLFSVP
STAYVALSCLNLFIGINSSAITFILELFENNPSLQKFNNTLKNMLIIFPHFCLGRGLIDL
AMNQAVTDVYARFGEKHVLNPFQWDFVGKNLVAMAVEGVVYFALNLLMQHHQIPTRWFSE
PAKLPISDEDEDVAEERQRIMNGGNKTDILTLQELTKIYAGRHRPAVDRLCVGVRPGECF
GLLGVNGAGKTTTFKMLTGDTDVTSGDAVVAGSSILTHISNVHQNMGYCPQFDAIDDLLT
GREHLHLYARLRGVPAEEIERVADWGIQKLGLQMYADQLAGTYSGGNKRKLSTAIALIGC
PPLVLLDEPTTGMDPQSRRFLWNSIVSVIREGRAVVLTSHSMEECEALCTRLAIMVKGTF
KCLGTIQHLKYKFGDGYIVTMKIKAPKPGLCPDPSPAEHFIQVNFPGSLQREKHCNMLQY
QICSSSLARIFRLLLSNKENLNIEEYSVSQTTLDQVFVNFAKQQMEDEEIPLHPHAAGAS
REVKVSPAFPQ
NT seq
7056 nt
NT seq
+upstream
nt +downstream
nt
atgagcttccttagacaggtcagactgctgctgtggaagaactggacactcaggaaaagg
caaaagcttcgttttctggtggagcttgcatggcctttgtctttatttcttgtccttgtc
tggctgaggaaggctaacccagtctatcgccaacatgaatgccattttccaaataaggct
atgccctctgcaggaacactgccatggttacagggcatcttctgtaatatgaacaatcct
tgtttccgcagccccacccgtggagaatctcctggcattgtgtctaactacaacaattcc
atcttagcaagagtgtatcaagatgctcaagagcttctactccaagcatctgaaatccat
gacttgggcagaatctgggaggaattgcgcattatgatccagtttatggaaacaatgagg
actaatcctgaaagaattgcaggaagagggttaagaatccgagacttcttgaaagaagag
gagactctgacgtcctttctgctgaatgatgctggcctctcagactcagtggttttccag
ctgattaattctcaagtgcgccctgaacagtttgcctatggagtccctgacttgactctg
aaggacatcgcctgtagccagaccctactcaaccgcttcattatcttcagcagccaaagg
ggtatgcatgctgtgtacaatgcaatgtgtgccctttcccaggagaacctgcagcaaata
gaagactccttgtatgcaaatgttgatttctttaagcttttccagctgcttcccaatgtt
ctagacagtaaggcgcaaggtgttgacctgagatcctgggggagagtgctgtctaatgtg
tctcaagcagtgcgagagctagccaggaggccaagcattcaggaccttttgttggttctg
caaccgtttgtacaaggtggagggccagaatccttcagccacctgatgagcgccttgtct
agtcttctctgtggctatccagagggaagtggttccagaatattctccttcaactggtat
gaagataataactacaaagccttcctaggggttgactccaccaagaaggaatccatttat
ttttatgacaatacaaccacacccttttgtaatgcattgatccagagcatggaatcaaac
cctttaaccaaaatagcctggagtgctgtgaagcccctgctgatgggaaaaatcctcttt
gctcctgattctcctgctgtaaggcaaatactgaagaatgcaaactccacatttgaagaa
cttgagcgcctcagactgttgaccaaagcctgggaagaagtgggacctcagctgtggcac
ttctttcaaagcagcctgcaaatgaatatgatccgaaacactctgaagaaccccacagtg
agacacttcttgaatggacagctggttgctgaaggtttaactgctgaagatgtgatcaac
ttcctccataatggatgtccagagaaccgcgaagagggtgtggcagactttgattggcgg
aatatcttcaatgtcacagaccaagctttgcgtttgtttaatcagtatttggagtgcttg
accctggataaatttgaaggtcatgctgatgaaacccaattgactcatcaagctcttaat
atgttggaggaaaacaaattctgggctggagtagtcttccctgacatacactccgaggcc
agcaagctgccaccacatgtgaactacaagatccggatggatatagatgcagtggagaaa
acaaataaaatcaaagacaggtactgggatcctggtccaagagctgacccagtggatgat
ttacgttatatctggggagggtttgcgtatctgcaagacatgattgagcatgggattata
aagacccagactaacgctgaagtgccatcaggaatctacctgcagcaaatgccctatccc
tgctttgtagacgatatcttcatgatcaccctgaaccgctccttccctatcttcatggtg
ctggcttggatctattcagtctccatgatagtgaagagcattgtgctggagaaggaaatg
agactgaaagaagcaatgaagaaccggggagttactaatggggttatctggtacacctgg
ttcctagacagcttcatcatgatgtctgtgagcgtgtctctcctaacagcactaattacg
tgtggcaaggtgcttcactacagcaatcctctcatcctccttctgtttctgctgacgttc
accacagccaccataatgcagtgtttcttgctcagtaccttcttctccaaagctaacttg
gcagccgcctgcagcggagtcctctacttcaccctctacctgccccatgtcgtctgcttt
gcgtggcaggaccgcatgactattaacctgaagattatggcaagcttgctttctccagtg
gcttttggattcggtacagaatacttgtcacgctatgaagagcaaggtgttgggctacaa
tggaacaatatcaggactagtcctctggagggagatgaatacagttttttcttctccatt
gagatgatgctttttgatgctttgctctatggaatgctcacgtggtaccttgaaaatgtt
tttccaggggagtatgggataccacggccttggtatttccctctgcaggagtcttactgg
tttgggtctggctacccaaaagctgagaacacagcaactgccgatgaaaaaagtcccagg
aaagaaggcagtccagcctggaaggccccaggacaggaaaagactgcaatcatgagggag
gaagcagatgagcctgaaaagctggaagaacagagtgacaaccagagggagaaggatggt
aaagaatccaaatgtaaacacaaaagaaaaaaagagcgcgccaagcaggggaagcctaag
gcagaggcaaaggacaaagatgaaatgactagtaaggagacagagagagagcaacctgaa
tggtctttgctttgcctagaacttgatgtcaacaccttttttgaacctgagcctccagac
ctgatcccgggtgtgtgtgcgcagaacctggtgaagatttttgcaggcaggcccaagcca
gcagtggatggcatgaatgttactttctatgagggccaaatcacagccttcctcggccac
aatggagctggaaagacaaccaccatatcaatcctaacaggcttgttcccacccacatct
ggaactgtcctggttggtggcaaggacatccagatgcatatggactcgattcggcagagt
ttaggcatgtgtcctcagtacaacatcttgtttaatcacctcactgtagcagagcacatc
ttgttttatgcccagctgaaagggaggtctcgagaggaagctgtattggagatggagatg
atgctggaagatataggcctcccccataaaagaaatgaagaggctcaaaacttgtcaggt
ggcatgcagagaaagctatctgttgccattgcctttgttggtgaagcaaaggtggtcgtc
ttggatgagcccacctctggagtagatccatattccaggaggtctatctgggatcttcta
ctgaagtatcgctcaggcagaaccatcatcctctctacgcatcacatggatgaggcagag
atccttggagaccgggtggccatcatttcccaaggaaaattgttctgctcaggctctcct
gtcttcctaaagaactgctttggatctggcttctatctcaccttggttcgcaagatgaaa
aacacccaagggggaggagaatggagttcacactcccctagctgtggatctcagtgctca
tgttcctgttccaggtgtgcacctaaagatacagcggaaggtcccgagcaagaactggat
ggggatgtgaatgaacttacagaactgattcatcatcatgttccagaagcaaagttaatt
gaaagtattggtcaggaactcatctatcttttgcccagtaaagactttaaacagcgagct
tacgccagtctcttcagagaattggaagaaaccctagctgacttgggactcagcagtttt
gggatttcggacactccgcttgaagaggttttcctgaaggtcacagcagatgctgatcct
ggatcacagaatgcaggaggtgctcaagaaaatggcttcaccctcagaaaaacctgcatt
gagcaaaaagagaaggctgaacaaccccctttggagaccaatggagcctctcgaacacct
gcaggccaaacaggggatgggagtgaaggcaaagggtcccggcagaataaaggttctcaa
cttgtccgccagcaaatcaaagcactgctcatcaaacggttccaccgtgctacccgtagc
cgtaaggacttccttgctcagattgttctcccagctacttttgtgttgttagctctaata
cttacagttattatccctccatttggagaatatcccagcttaatactacatccttggatc
tatggataccagattactttcttcagcaatgagcagcctggcagtgagcagatggtttcc
ctcactgatgccttcctgaataagccaggatttggaaatcgttgcatgaaggaagagcct
cttcgggactacccgtgcagtaatatgtcaactgcctggagaataccacatattcctccg
aacataaccaacctgtttctgacccacaaatggagccctgatgacccttctccctcctgc
agctgcagcactcgcaagaagctcactatgctcccagaatgcccggcgggagctggaggc
cttcctcccccacagagagtgcagcgcagcacagaaattcttcaagatctcacccacaga
aacatttctgatttcctggtgaaaacttatcccagtctgatcagagaaagtttgaagagt
aaatactgggtcaatgagcaaaggtatggaggaatttccattggaggaaaactcccagtc
cttcatgtcactggagatcaaattgttgattttttgagagatcttggccaaatgatgaat
ataacagggggtcaagccgcgatgtctgttgctaaagaaatgtctaatttccttaaatac
atggaaactgaagacaacattaaggtgtggtttaacaataaaggctggcacgccatggta
agctttctcaatgtagccaacaatgcagtcctgagagccaatctgcgacaaggccaagct
cctgaggaatatgggatcactgcaataaatcatcctctgaacctcaccaaggagcagctc
tcagaagtcactgtgctgaccacttcggtggatgttgttgttgccatctgtgtgattttt
gccatgtccttcatcccggccagttttgttttgtatctgatccaagaacgggtgacaaag
gccaagcacctccagtttgtcagtggtgttagccctgctgtttactggctaaccaatttc
atttgggacatcgtgaattacacactgagtgctggcatggttgtgggtatattcattgga
tttgaaaagaaagcctacacgtctccaagcaatctccctgtacttattgcattgctgctt
ctgtatgggtgggcagtaattcccatgatgtacccagcgtcctacctgttcagtgttcct
agcactgcctacgttgcattgtcttgtcttaatctcttcattggtatcaacagcagtgcc
attacatttatcctggagttgttcgaaaataacccatctttgcagaaattcaataataca
ctgaaaaatatgctgataatcttcccacatttctgcctgggccgtggactcattgaccta
gccatgaaccaagcagtgacagatgtctatgccaggtttggtgagaagcatgtcttgaat
ccattccagtgggattttgttggaaagaacctggttgccatggcagttgaaggggttgta
tactttgctctgaatctccttatgcagcatcatcagatccccacaagatggttttctgag
cctgctaagttgcctattagtgatgaagatgaggatgttgcagaggaaagacaaagaatt
atgaatggaggaaacaaaacagatatcttaacattacaagaactgaccaagatttatgca
ggtagacacaggcccgccgtagacagactctgtgttggcgttcgtccaggagagtgcttt
ggtctcctgggagtgaatggagccggcaagacgacaaccttcaaaatgctgactggggat
actgacgtgacatctggtgatgctgtagtggctggcagcagtatattgacccacatctct
aatgtccatcaaaacatgggctactgtccacaatttgatgctattgatgacctcctcaca
ggccgggaacacctccatctctatgcacgcctgcgaggggttcctgctgaggaaatcgag
agggttgctgactgggggattcagaagctgggtctccagatgtatgcagaccagctggca
ggcacatacagtggtggtaacaagcgcaaactctctactgccattgccctgataggctgc
cctcctcttgtcctgctagatgaacccactacagggatggatcctcagtcccgacgcttt
ttatggaactctattgtcagtgtgatccgagaagggcgagccgtagttctaacctcacac
agcatggaagaatgtgaagctctctgcactcgtctagccataatggtgaaggggaccttc
aaatgcctgggcactattcaacatttaaaatacaaatttggagacggatatattgtcacc
atgaaaattaaagcacctaaaccagggctgtgtccagatccaagcccagctgagcatttc
atacaagtcaacttcccaggcagtttacaaagagagaaacactgtaacatgctgcagtac
cagatttgctcctcctcactggccaggatctttcggttacttctctccaacaaagaaaac
ctgaatattgaagaatattcagtctctcaaacgactttggatcaggtatttgtgaacttt
gctaagcaacagatggaggatgaagaaattcctttacaccctcatgctgctggagccagt
cgggaggtgaaggtgtccccagcttttcctcagtag
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integrated database retrieval system
