Chelonia mydas (green sea turtle): 102932394
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Entry
102932394 CDS
T02989
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X4
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102932394 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102932394 (CNOT10)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102932394 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_12
ARM_TT21_N
TPR_19
TPR_8
ARM_TT21
TPR_17
TPR_7
TPR_MalT
Herpes_UL51
Motif
Other DBs
NCBI-GeneID:
102932394
NCBI-ProteinID:
XP_007067280
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All DBs
Position
2:complement(188028563..188092071)
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AA seq
745 aa
AA seq
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MAADKAGDQGTEKHEGTVTSSGITDQEKELSSSALQAFNAGNYDACLQHLSCLQEINKDD
YKITLNTAVAEFCKNNQTTTDNLKQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVIL
YHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTYQAEKALHLLSVLEKMIS
QGNNNKNGKNNETGNNTNKESSNHRAESGALIEAAKSKIHQYKVRAYIQMKSLKACKREI
KSVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNL
GCIHFAMGKHNLGIFYFKKALQENDNACAQLGTGSTDPGKKFSGRPMCTLLTNKRYELLY
NCGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRLAECCIAANKGTSEQETKGLPSKKG
IVQSIVGQGYHRKIVLASQSIQNVVYNDGQSSAIPVASMEFAAICLRNALLLLPEDQQEP
KQENGSKTNNQLGGNAENNESSEACSSKSHEGDKFIPAPPSSPLRKQELENLRCSILACS
AYVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENV
TDVSLGISSNEQDQGSDKGENEVMESSGKQTPQCYPSSVTSARTMMLFNLGSAYCLRSEY
DKARKCLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVKTHTDMR
KKPIFQPVHPIQPIQMPAFTTVQRK
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacaaggcgggcgatcagggaactgagaaacatgaaggaacagttacttcc
tctgggattactgatcaggaaaaggagctgtcaagtagtgcattacaagcttttaatgct
gggaattatgatgcttgtctgcaacatcttagctgcttgcaagaaataaacaaagatgac
tacaaaataactttgaatacagctgttgcagagttctgtaaaaataaccagactacaaca
gacaacttgaaacaaacacttaatcaactgaagaatcaggttcattcagctgttgaagaa
atggatggcttagacgatgttgaaaacagcatgctttactacaatcaggcggttattctg
tatcatctgcgtcaatacactgaagcaatatcggttggagagaagctttaccagtttata
gaaccttttgaagagaagtttgcccaggctgtgtgcttcctgcttgtagacttgtatctg
ctaacttaccaggctgagaaagccttgcatctgctttctgttttggaaaaaatgatttca
cagggcaataataacaaaaatggaaaaaataatgagacaggtaataacacaaataaggag
tcatctaatcatagagctgaaagtggagctttaatagaagctgcaaaatctaagatacat
cagtataaagtgagagcctatatccagatgaagtctctaaaagcatgcaaaagggagatt
aagtctgttatgaatacagctggaaattctgctccttctctctttcttaagagcaatttt
gagtatttgagggggaattatcggaaagcagtaaaactgttaaacagctcaaacattgct
gaacatccaggattcatgaaaacaggtgaatgcttaaggtgcatgttttggaacaatctc
ggctgcattcattttgctatgggaaagcacaatttaggaatcttctactttaaaaaggcc
ctgcaggaaaatgataatgcatgtgcacaactaggaacaggtagcacagacccaggcaag
aaattttcagggagacctatgtgtacgttgttgactaataaacggtatgaattgctatac
aactgtggaattcagcttttacatattgggaggcccctagctgcttttgaatgcttgata
gaagctgtccaagtttaccactcaaacccacgcctctggttgagactagcagaatgctgc
attgctgccaacaaggggacatcagaacaagaaactaaaggtcttccaagcaaaaaagga
atagtacaatctattgtaggtcaaggctatcaccgtaaaatagtccttgcctcacaatca
atacagaatgttgtttataatgatgggcagtcctcagctatccctgtagccagtatggag
tttgcagcgatttgtctaagaaatgccttgctgttgctgccggaagatcagcaggagcca
aagcaggaaaatggatctaaaactaataaccagttgggaggaaacgcagagaacaatgaa
agcagtgaagcatgcagcagtaaaagtcatgaaggagataaattcattccagctccacct
tcttcacctctgagaaaacaggaattagaaaatttaaggtgctcaatacttgcctgcagt
gcttatgttgctctggctttgggtgataaccttatggctttgaatcatgcagataaactt
cttcagcagccaaagctgtcaggatctcttaagtttcttggccatttatatgcagcagag
gctctcatctctctagacagaatatctgatgccattactcacttgaaccctgagaacgtc
actgatgtttccctggggatctcttcaaacgaacaggatcaagggtcagacaaaggagaa
aatgaggtgatggaatcttctggcaagcagacaccccagtgttatcccagttcagtcact
tctgcacgaacaatgatgttgtttaaccttggcagtgcttactgcttgcgaagtgaatat
gataaagctcgcaagtgtctccaccaggctgcttcactgatccatcccaaagaaattccc
ccggaggccattctactggctgtgtatcttgaactacagaatggtaacactcaactggca
ctgcagatcatcaaaagaaaccagcttctcccttcagtgaaaacacacactgatatgcga
aagaagccaatatttcagccagtccaccctatccagcccattcagatgccagctttcacc
actgtccaaaggaagtga
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