Chelonia mydas (green sea turtle): 102932863
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Entry
102932863 CDS
T02989
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102932863 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmy03021
]
102932863 (SMARCA4)
03036 Chromosome and associated proteins [BR:
cmy03036
]
102932863 (SMARCA4)
Transcription machinery [BR:
cmy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102932863 (SMARCA4)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
102932863 (SMARCA4)
Chromatin remodeling factors
BAF complex
102932863 (SMARCA4)
PBAF complex
102932863 (SMARCA4)
GBAF(ncBAF) complex
102932863 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
102932863
NCBI-ProteinID:
XP_037743775
LinkDB
All DBs
Position
20:complement(17042503..17099698)
Genome browser
AA seq
1646 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSSGHAIPPQG
TGGYAQDNMHQMHKPMDSMHEKGISDDPRYGQMKGMGMRPGGHTGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPANGPSSGSQMSSGPGGVPLDGTDPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSGTGPVQGAGPGPGP
GPTPPNYNRPHGIGGPNMPPPGPSGVPPGMPGQPPGAPPKPWPEGPMANAAAPTSTPQKL
IPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRGLD
PVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVV
CMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQH
AKDFKEYHRSVTAKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLI
DQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPD
GEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLDTWLEMNPGYEVAPRSDSEESGS
EEEEEEEEEEQPQPAQPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQA
LARGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGL
GKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRA
FVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA
PRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETIL
IIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSE
KDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFE
LLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFN
EPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLR
LCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDENRYST
GSGSGSASFPHTASTLCLNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDR
RREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSL
TEKQWLKVYMAIEEGTLEEIEEEVRQKKSSRKRKRDVDVGSATPTTSTRSRDKDDDSKKQ
KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL
IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV
RQKIEKEEDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGRRRTSRGSR
AKPVVSDDDSEEEQEEDRSGSGTEDD
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagatcctccactgggaggaactcctcgcccaggtccttctcctggaccc
ggcccatcacctggtgcaatgttgggccccagtcctggaccctcgcctggctctgcacat
agtatgatgggacccagccctggaccaccttcatcaggacacgctataccacctcagggg
actgggggctatgctcaggacaacatgcatcagatgcacaagccaatggattccatgcat
gagaagggaatatctgatgatcctcggtacggccagatgaaggggatgggaatgaggcca
ggtgggcacacgggaatgggtcctcctccaagcccaatggatcagcattctcaaggttac
ccttctccgcttggcggttctgagcatgcctcaagcccagttccagctaacggtccatcc
tctggctctcaaatgtcatctggtcctggaggagtcccgttagatggtactgacccacaa
gcattaggacaacagaatcggggcccaaccccttttaatcagaaccagctgcaccagtta
agagctcagatcatggcctataagatgcttgccagagggcagccgttacctgaccatctt
cagatggcagtgcagggaaagagaccaatgcctggaatgcagcagcaaatgccgacgcta
cctccaccctctgtatctgggacaggaccagtgcaaggagcagggcctgggcctggacca
ggaccaacacctccaaattacaacagacctcatggtataggagggcctaacatgcctcct
cctggaccctcaggagttcccccaggaatgcctgggcagccccctggtgcacccccaaag
ccctggcctgaaggaccaatggcaaatgctgcagcccccactagcacacctcagaaactg
attcctcctcagccaactggccgtccttcaccagcacccccggcggtacctcctgcagca
tctcctgtaatgccaccccagactcagtcacccgggcagccagcccagcctgcccccatg
gtgcagctccatcagaagcagaatcgtatcacaccgatccagaagccaagaggacttgat
ccagtggaaatccttcaggagagggaatacagattgcaggctcgcattgctcacagaatc
caagaactagaaaacctgcccgggtccttggctggtgacctgagaaccaaagctaccatt
gaacttaaagcactaagactgcttaacttccagagacagctgcgccaggaagtcgtggtg
tgcatgagacgagacacggccctggaaacggcgctgaatgccaaggcatacaaacgcagc
aagcggcagtccctgcgcgaggctcgcatcacagagaaactggagaaacaacagaagatc
gagcaagaacggaaacgcagacaaaagcaccaggaatacctcaatagcattctccagcat
gccaaggatttcaaagaataccatcgatctgtcacggccaaaattcaaaagcttacaaaa
gctgtggctacttaccatgctaacactgagcgtgagcagaagaaagagaatgagaggatt
gagaaagagcgaatgcgcaggttgatggctgaggatgaagaagggtaccgtaagcttatt
gatcagaagaaagataagcgcttggcatatctactccagcagacagacgagtatgtggcc
aacctgaccgagctggtgcgacaacacaaggccgcacaggtggcaaaggagaaaaagaag
aaaaagaaaaagaagaaggcagagaatgcagaagggcaaactcctgcaattggaccagat
ggcgaacctctggatgagaccagccaaatgagtgatctccctgtgaaagtgatccatgtg
gaaagcggtaaaatccttaccggcacagacgctccaaaggctggacagctggacacctgg
ttggaaatgaacccagggtatgaagtagctcccagatctgacagtgaagaaagtgggtcg
gaggaggaggaagaggaggaggaagaggaacagccacaacctgctcagcctgccctgcct
gtggaggaaaagaagaagatcccagatccagacagtgacgatgtgtcagaagtcgatgcc
aggcacattattgaaaatgctaagcaagatgttgatgatgagtatggggtctcccaagct
ctggcgaggggattgcaatcttactacgctgtggcccacgcggtcactgaacgagtggac
aaacagtctacgcttatggtcaatggtgtcctcaaacaataccagattaaaggtttggag
tggctcgtctctttgtacaataataatctgaatggtatcctggcggatgagatgggtctg
ggcaaaactatccagaccatcgctttaatcacatacctcatggagcacaagcgtatcaat
ggacccttcctcattatcgtacctctctcaacattgtcaaactgggcatatgaatttgat
aaatgggctccttctgtggtgaaggtctcctacaagggctctccagcagcaagacgggca
tttgtacctcagcttcgaagtgggaagtttaatgtcttgcttacaacctacgagtacatc
atcaaagataagcacattcttgccaagattcgctggaagtacatgattgttgatgaaggt
cacagaatgaagaatcaccactgtaagctaacccaagtcctcaacacacactacgtagct
ccgcgtcgtttgctgctgacaggaactccactacagaataagctgccagagctgtgggct
ctactcaatttcctccttcccaccatcttcaagagctgcagcacatttgagcagtggttt
aatgctccatttgccatgactggagagaaggtggatttgaatgaagaagaaactattctg
attatccgtcgtttgcacaaagttctgcgtcccttcctgctcaggcggttaaagaaggag
gtagaagcacagctgcctgaaaaggtggagtatgtgatcaagtgtgacatgtcagcgtta
cagcgggtgctgtatagacacatgcaggccaagggagtgctgctcactgatggctcggag
aaggataaaaagggcaaaggtggtacaaaaaccctgatgaacaccatcatgcagctgagg
aagatctgtaaccatccgtacatgtttcagcacatagaggaatccttttcagagcactta
ggtttcactggaggtattgtacagggactagacctgtaccgagcatctggcaaatttgag
ctcctagacaggattcttcccaaactacgagccaccaaccacaaggtgctgctgttctgt
cagatgacctcactcatgaccatcatggaagactactttgcataccgtggcttcaaatac
ctcaggctggatggaaccactaaagctgaagaccgtggcatgttgctgaagaccttcaat
gagccaggctctgaatatttcattttcctgctgagcactcgggccggagggctgggactg
aacttacagtctgcagatactgtgattatttttgacagtgactggaatccgcaccaggat
ttgcaggcacaggaccgagcgcaccgtattgggcagcagaatgaggtgcgcgtgctccgc
ctctgcaccgtgaacagcgtggaggagaagatcctggctgcagccaagtacaagctgaac
gttgatcagaaggtcatccaggctggcatgttcgaccagaaatcctccagccatgagcgg
agagctttcctccaggctatcctagagcacgaggagcaggatgagaacagatacagcacg
ggcagcggcagtggcagtgcaagcttcccccacactgcctcaaccctgtgcctgaaccct
gacttggaggaaccacctctaaaggaagaagatgaagttcccgacgatgaaacagtcaac
cagatgattgcccgtcatgaggaggaatttgacctttttatgcgcatggacctggaccgc
aggcgggaggaggcacgtaatccaaagcgaaagccacgtctaatggaagaggatgagctg
ccatcctggattattaaggatgatgctgaagtggagaggctcacgtgtgaggaggaggag
gagaagatgtttgggcgagggtcacgtcaccgtaaggaggtggactacagtgactcgctt
accgagaagcagtggctcaaggtatacatggctatagaggagggtacgctggaggagatc
gaggaggaggttcgtcagaagaaatcttcccgcaaacgcaagcgagatgttgacgttggt
tctgccaccccgactaccagcacccgcagccgggacaaagatgatgatagcaaaaagcag
aaaaagcgcggcaggcctcccgccgaaaagctctccccaaacccccccaacctcaccaaa
aaaatgaagaagatcgtggatgctgtgattaaatataaggacagtagtagtggacgccag
cttagcgaagtcttcatccagctgccttctcgcaaggagctcccggagtactacgagctc
atccgcaagccagtggatttcaaaaaaataaaggaacgcatccgcaaccacaagtaccgc
agcctgaatgacctggagaaggatgtcatgctgctgtgtcagaacgcacaaacctttaat
ctggaaggctctctgatctacgaagactcgatagtgctgcagtctgtcttcaccagcgtg
aggcagaaaattgagaaagaggaagacagtgaaggtgaggagagtgaggaggaggaggaa
ggagaagaggaaggatctgaatctgagtctcgctccgtcaaggtgaagatcaagctgggc
agaaaggagaaagcacaagaccggctaaagggtcgcaggcgcaccagccgcggctcccgg
gccaagccagtggttagtgacgacgatagtgaagaggagcaggaagaggatcgctcagga
agcggcaccgaagatgattaa
DBGET
integrated database retrieval system
