Chelonia mydas (green sea turtle): 102933038
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Entry
102933038 CDS
T02989
Symbol
CTCFL
Name
(RefSeq) transcriptional repressor CTCFL isoform X2
KO
K23195
transcriptional repressor CTCF
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmy03000
]
102933038 (CTCFL)
03036 Chromosome and associated proteins [BR:
cmy03036
]
102933038 (CTCFL)
Transcription factors [BR:
cmy03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102933038 (CTCFL)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102933038 (CTCFL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
Zf-C2H2_ZNF451_C
zf-C2H2_15
zf-C2H2_6
A24_N_bact
zf-C2H2_7th_ZNF462
zf-C2HE
zf-C2H2_ZN142
zf-C2H2_REST
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
102933038
NCBI-ProteinID:
XP_027678081
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All DBs
Position
13:12196855..12223167
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AA seq
693 aa
AA seq
DB search
MWSWCGLNLKAMGCLSSFHCCLLGQVCLMMASQDSALPELFTKIKGAERTWDKAREDDGG
GKISWVKERNSICDPDAEGLNGALPAKLLEEGGGNRELSPSPVQGEKHLIMLQTVHLKEG
EEDVQGVSQLNIQQQSGVHMVVQRGASVLQPLVVVQQGVGAQQNLPTGVAISIQDGVYTF
HDVEVMQINVLQEKVQAKDEENQSMDKPPGMLLIKIDRSKDLHAVEGKVQQLPPNEEGRE
KDIFSVEKAKILSCKAKDDMSVSHYEHKEQEEEAVIKKPDTLEAQTNTQHRKKGEKVIFH
CDLCAFTSLRISSLNRHMKTHSDEKPHVCHLCLKAFRTVTLLRNHVNTHTGTRPYKCSDC
EMAFVTSGELARHRRYKHTLEKPFKCSMCKYSSVEASKLKRHLRSHTGERPYNCYLCSYA
SKDTYKLKRHMVTHSGEKPYECYVCQARFTQSGTMKIHILQKHSENVPRYQCPHCNTFIA
RKSDLGVHLRNLHSYLAVAMKCRYCEALFHERYALIQHKKTHRNEKRFKCDRCSYACKQE
RHLIVHMRTHTGEKPFTCVCCSKCFRQKQLLTVHFRKHHDSNFKPTVYECPKCGKGYSRW
NNMHKHAESCGLVRAKAVTRRKGNKGKKKRCDRLKHDVKQEAVDLGSFQDVSFVNTECCA
SEIVPVVYGIETSTPREQKTEMTCEMILNMMDK
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtggagttggtgtgggctgaatttaaaggcgatggggtgccttagtagctttcattgc
tgtctcttgggacaggtttgtttaatgatggcctctcaggactcagccctgcctgagctg
ttcaccaaaataaaaggtgctgaaagaacctgggacaaggcaagagaagatgacggaggg
ggcaagatatcctgggtgaaggaaagaaacagcatctgtgacccagatgctgaaggccta
aatggagcccttccagccaagctgctggaagaaggaggaggaaaccgggagttgtcccca
tctccagtacagggtgaaaagcatttgataatgctgcagactgtgcatttgaaggaaggg
gaagaagacgtccagggggtcagtcagttgaatattcagcagcagagtggggtgcacatg
gtagtacaacgaggagcaagtgtcttgcagcccttggtagtagtgcaacagggagtaggt
gctcagcagaatctacccacaggtgtagcaataagtatacaggatggtgtttatacattt
catgacgtggaggtgatgcagattaatgttttgcaagaaaaagtacaggcaaaagatgaa
gaaaaccagtccatggataaacccccaggaatgctactgattaagattgacagaagtaaa
gatctacatgcagttgaaggtaaggtccagcaactgcctccaaatgaagagggaagagaa
aaggacattttcagtgttgagaaagcaaagatcttgagctgtaaagccaaagatgatatg
tcagtgtcacactatgaacacaaagagcaagaagaagaagcagttataaaaaaacctgac
actctagaagctcaaacaaacacacagcataggaaaaaaggggaaaaggtgatcttccat
tgtgatctgtgcgcattcacctctcttagaatatcaagtcttaatcgtcacatgaaaacc
cattctgatgaaaaaccccatgtgtgtcacctctgtcttaaggctttccgtacagttact
ctcctgcgtaaccatgtgaatacacatacagggaccagaccgtataagtgcagtgactgt
gagatggcatttgtgaccagtggtgagcttgcacgacacaggcgatataagcacactcta
gaaaaaccctttaagtgctcaatgtgtaaatattctagtgtagaagcaagcaaattgaag
cgtcaccttcgttcacatacaggagagcgtccttataactgttatctctgtagttatgct
agcaaagatacctataagctgaaaagacatatggtaactcattcaggagaaaaaccctat
gaatgttatgtttgtcaggccagattcacacaaagtggtaccatgaaaatccatatatta
cagaagcatagtgaaaatgtgcccagataccaatgtccacattgtaacacatttattgca
agaaaaagtgatttgggcgttcacttacggaacctgcattcctacctggccgtagcgatg
aagtgccgttattgtgaagctcttttccatgagcgctatgctcttattcagcacaagaaa
actcatagaaatgaaaagcgattcaaatgtgatcgatgcagttatgcatgcaagcaggaa
cgacacttgattgtgcatatgcgtacacatactggtgagaaacccttcacttgtgtatgt
tgcagcaaatgcttccggcagaagcagcttctaactgttcacttcaggaaacaccatgat
tccaattttaaaccaacagtttatgaatgccctaaatgtggcaagggctattcacgctgg
aataatatgcataagcatgctgaaagctgtggattggtgagggcaaaagctgttacacgc
cgcaaaggaaacaagggcaaaaagaaaagatgcgacagactgaaacatgatgttaagcaa
gaagctgttgacctgggatcattccaagatgtttcctttgtgaacacggaatgctgtgcc
agtgagattgtccctgtcgtatatggaatagaaacaagtactccgagggagcagaaaaca
gaaatgacttgtgaaatgatcctcaacatgatggacaaataa
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