KEGG   Chelonia mydas (green sea turtle): 102933076
Entry
102933076         CDS       T02989                                 
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
  KO
K13175  THO complex subunit 6
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102933076 (THOC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmy03019]
    102933076 (THOC6)
   03041 Spliceosome [BR:cmy03041]
    102933076 (THOC6)
Messenger RNA biogenesis [BR:cmy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     102933076 (THOC6)
Spliceosome [BR:cmy03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    102933076 (THOC6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd NBCH_WD40 ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_IP5PC_F Beta-prop_WDR75_1st Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_EIPR1 WDR54 Beta-prop_NOL10_N Beta-prop_DCAF12 WD40_like
Other DBs
NCBI-GeneID: 102933076
NCBI-ProteinID: XP_037754691
LinkDB
Position
6:1290863..1304130
AA seq 332 aa
MAPGERDAQRALELLHMTVFSQSVSPCGKYLAAGNNYGEIAIFSLSAALSSEAKEESKKP
VVSFTAHDGPVYAMVSTERQLLSSGNGELRAWNWSDIVKKGCKEAWSRRPPYRSSLEVPE
INSLQLNPKDNSLLLAGGDCAVHAMDLESGAFTQEFRGHSDYVHCLALRDQAQECLSGSE
DGTVRMWDLRTGAQVQLIEVHKYEECSRPQLGKWIRCLATDCDWMVCGGGPALTLWHLRS
VTPTTVFPLPHSQQHVMFYQDLILSAGHSPAINHLQISGEIRAQIPCTPRSVHSLCVNER
SPEHKVLTAAGSSHKVDVFTNFSYRAFSLCFA
NT seq 999 nt   +upstreamnt  +downstreamnt
atggcacctggggagagggacgcccagcgcgcgctggagctgctgcatatgaccgtcttc
tcccagagcgtctcgccctgcggcaagtacctggcagctgggaacaactatggggagatc
gccatcttcagcctctcggcggcgctgagctccgaagccaaggaggagagcaagaagccg
gtggtgtccttcactgcccacgacgggccggtctacgccatggtctccaccgagcggcag
ctgctgagctccggcaacggcgagctcagggcctggaactggagcgacatcgtcaagaag
gggtgcaaggaagcctggagccgcagacccccgtacaggagcagcctggaggtgcccgag
atcaacagcctgcagctgaaccccaaggataacagcctcctgctggccgggggcgactgc
gccgtgcacgccatggacctggagtccggcgccttcactcaggagtttcgggggcacagc
gactacgtccactgcctggcgctgcgggaccaggcccaggagtgcctgtcgggcagcgag
gacggcaccgtgcgcatgtgggatctacgcaccggggcacaggtccagctcatcgaagtg
cacaaatacgaggaatgcagccggccccagctcgggaagtggatccgttgcctggcaaca
gactgtgactggatggtgtgcggggggggcccggcgctcaccctctggcacttgcgctcc
gtgacccccaccacggtcttccccctgccccactcccagcagcacgtcatgttctaccag
gacctgatcctctccgcagggcacagcccggccatcaaccacctgcagatcagcggggaa
atcagggctcagatcccctgcacgccccgctccgtccactcgctctgcgtcaacgagcgc
tcccctgagcacaaggtgctgacggccgccgggagcagccacaaagtcgacgtcttcacc
aacttcagctaccgagccttctccctctgcttcgcttag

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