Chelonia mydas (green sea turtle): 102933175
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Entry
102933175 CDS
T02989
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13 isoform X1
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmy03009
]
102933175 (DCAF13)
04121 Ubiquitin system [BR:
cmy04121
]
102933175 (DCAF13)
Ribosome biogenesis [BR:
cmy03009
]
Eukaryotic type
90S particles
Other 90S particles
102933175 (DCAF13)
Ubiquitin system [BR:
cmy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
102933175 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
eIF2A
ANAPC4_WD40
KNTC1_N
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
102933175
NCBI-ProteinID:
XP_007056160
LinkDB
All DBs
Position
2:complement(35875265..35919681)
Genome browser
AA seq
446 aa
AA seq
DB search
MRVKVLSRNPDDYIRETKQDLQRVPRNYDPALHPFEVPREYMRALNATKLERVFAKPFLA
SLDGHRDGVNCMAKHPHSLSTILSGACDGEVKIWNLTKRECIRTLQAHEGFVRGICARFC
GTSFFTVGDDKTVKHWKMDGPGYGGEEEEPLHTILGKTVYTGIDHHWKEAVFATCGHQVD
IWDEQRTSPICSLTWGVDSISSVKFNPIETYLLGSCASDRNIVLYDMRQSTPLKKVILDM
RTNTLCWNPMEAFIFTSANEDHNLYTFDMRFLESPVMVHIDHVSAVLDVDYSPTGKEFVS
ASFDKSIRIFPVDKGHSREVYHTKRMQHVITVKWTSDNKYILCGSDEMNIRLWKANASEK
LGVLVPRERAAMNYNQKLKEKFQHHPQIKRIARHRHLPKAIYGQAKELRIMREARRRKEL
NRRKHSKPGSSPFVPEKKKHVVAVVK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgaaggtgctgagccggaacccggatgattacatccgcgagaccaagcaggat
ctccagcgcgttccaagaaactatgatcctgcattgcatccatttgaggttccacgagag
tatatgcgagccctgaatgcaacaaaattagaacgtgtgtttgcaaaaccttttcttgct
tcactggatggtcacagggatggagttaattgtatggctaagcatccacatagtttgtct
acaatactttctggggcctgtgatggagaggttaaaatttggaacttgaccaagcgagaa
tgcatccgtactttacaagcacatgagggctttgtacgagggatatgtgcccgcttttgt
ggtacttctttcttcaccgttggtgatgataaaactgtgaagcactggaaaatggatggc
ccaggatatgggggagaagaagaagaaccactgcatacaattcttggaaagacagtgtac
acaggaattgatcaccactggaaggaagctgtatttgcaacttgtgggcatcaagtagac
atctgggatgaacaaaggaccagtcccatatgctctttgacatggggtgttgatagcatc
agcagtgttaaatttaatccaattgagacgtatcttttgggaagctgtgcttcagacaga
aatattgtgctgtatgacatgaggcaatcaactccattaaagaaggttatcttggacatg
aggacaaatacgctctgttggaaccccatggaagcttttattttcacttcagcaaatgag
gaccacaacttatatacatttgatatgcgttttcttgagtcgcctgtaatggttcacatt
gatcatgtgtctgcagttcttgatgtggattactcccccactgggaaagaatttgtatct
gccagctttgataaatctattcgcatttttcctgtagacaaaggtcacagcagagaggta
tatcatacaaagcgaatgcagcatgtcatcactgtcaagtggacctctgacaacaagtac
attctgtgtggctcagatgagatgaacattcgtctgtggaaagctaatgcttctgaaaaa
ctgggcgtgcttgtaccacgagagagagcagctatgaattacaaccaaaagttgaaggag
aagttccaacaccacccacagatcaaacgcatagctcgtcaccgtcacctgcccaaagcc
atctatggccaggccaaggagctgcgcatcatgcgagaagctcgtcggcgaaaggaactg
aatcgccgtaaacacagcaaaccaggatcctcaccatttgtgccagaaaagaagaagcac
gttgtggctgtagtgaaataa
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