Chelonia mydas (green sea turtle): 102933414
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Entry
102933414 CDS
T02989
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102933414 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102933414 (HBS1L)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102933414 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
GIP1_N
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
102933414
NCBI-ProteinID:
XP_007058115
LinkDB
All DBs
Position
3:complement(99642745..99758232)
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AA seq
735 aa
AA seq
DB search
MRIQNVREGGCSARAHSDSRRAGGDQDGGLRLRPPTPPSVSDVAAAAMARHRNVRGYNYD
EDFEDDDLYGQSVEDDCCISPSTAAQFIYSRRDKPSAFAERLEEEYGYEDVQEPAKISTS
NHQLTGVDQARLYSCLDQMREVLGEAVPEQVMVEAVLNSKFDVQKALDLVLAQDSKQNVK
TKNEEAVTTGKTTKGKPRDSQSTRIDSKIVPKVTKMTVSGKKQAMGFEVPSVIAEENGHS
ANTPQKRPSSEDSSVTSGIVELVSKSALPSQTIQIPEEQSTVPTPVKKSSKTRQQIDVKA
ELEKRQEGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKKAGKASFAY
AWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQADVAILVV
DASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVSWQQERFQEITSKLGQFL
KQAGFKESDVAYIPTSGLGGENLVTSCQSSELTEWYKGKCLLEQIDSFKPPQRSVDKPFR
LCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHDEPVDWAAAGDH
VSLTLTGMDIIKINVGCIFCGLKEPIKACTRFRARVLIFNIEVPITKGFPVLLHYQTVSE
PATIRRLLSILHKSTGEVTKKKPKVLTKGQNALIELQTQRPVALELYKDFKEFGRFMLRY
SGSTIAAGVVTEIKE
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatacagaacgtccgggaggggggctgttccgcgcgtgcgcacagcgattcgcgg
agggcaggcggagaccaagatggcggcctaaggctgcggccgccaacgccaccgagtgtg
agcgacgtcgctgccgccgccatggcccggcacaggaacgtccgaggctataactacgac
gaagattttgaagatgatgatctttatggccaatcagtagaggatgattgttgtatttcc
ccttcaacagctgctcagtttatttactcaagacgtgacaaaccctcagcatttgctgag
cgattagaagaagagtatggctatgaagatgtgcaagaacctgccaagattagtacatcc
aatcatcagctaactggagtcgatcaagctcgtctttattcgtgccttgaccagatgaga
gaagtgctgggggaagctgtaccagagcaggtgatggtggaagcagtgttgaatagtaaa
tttgatgtacagaaggctttggatcttgtgcttgcacaagacagtaagcaaaatgtgaag
accaagaatgaagaagctgtgactacaggaaagacaacaaaaggaaaaccaagagattcc
cagtcaaccagaatcgattctaaaattgtgccgaaagttaccaaaatgactgtgtctgga
aagaaacaagctatgggatttgaagttccaagtgtgattgctgaagagaatggtcatagt
gctaatacacctcaaaaaagaccatcatctgaagattccagcgtcacttctggaatagtt
gagttggtctctaaatcagctcttccatcccaaacaattcagattccagaagagcagagt
acagtacctactccagtgaaaaagtccagcaagacaagacaacaaatagatgtgaaagca
gagctggagaagaggcaagaaggaaaacagctgctgaatttagtggtcataggacatgtt
gatgcaggtaaaagtactctaatgggtcatttactctaccttctgggcaacgtgaacaaa
cgaactatgcacaaatacgagcaggaatccaaaaaggctggcaaagcttcatttgcttat
gcatgggtcttggatgaaactggggaagaaagagaaaggggagtaacaatggatgtgggt
atgaccaaatttgagacaaagactaaagttattacattgatggatgctccaggccataaa
gatttcatcccaaatatgatcacaggagctgcacaggctgatgtggctattttggttgtg
gatgctagcaggggggagtttgaagcagggttcgagactggtggacagactcgagaacat
gggttattggttcgctctcttggagtaacacagctggcagttgcagtcaataaaatggac
caggtcagttggcaacaggagagatttcaggaaattaccagtaaacttggccagtttctt
aaacaagctggctttaaggagtccgatgtagcttatatccctacaagtggtcttggtggt
gaaaatctagtcacaagctgtcaatcaagtgaactcactgaatggtataagggaaaatgt
ttgttagaacaaattgattctttcaagccaccacagagatcagtggataaaccatttaga
ttatgcgtgtctgatgtttttaaagaccaaggatcaggattttgtgtgactggtaaaata
gaagcaggatatatacagactggagaccgacttctggctatgcctcccaatgaaacttgc
actgcaaaaggaatcacactgcatgatgaaccagttgattgggctgcagcaggagatcac
gttagtctcactttgaccggcatggatatcatcaaaatcaatgttggctgtatattttgt
ggtctcaaggaacccatcaaagcctgcactcgtttcagagctcgagtcctcatctttaat
attgaagtccccattactaaaggattcccggtgcttttacactatcaaactgtaagtgag
cctgccactattagacgattattgagtatccttcacaagagtactggcgaagtcacaaag
aaaaaacctaaggtcctgactaaaggacagaatgctttaatagaactacaaacacaaagg
cctgttgccctggaattgtacaaagattttaaagaatttggaaggtttatgttacgctac
agtggatccacaatagctgcaggagttgtcacagagattaaagaatga
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