KEGG   Chelonia mydas (green sea turtle): 102933558
Entry
102933558         CDS       T02989                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor isoform X2
  KO
K14298  mRNA export factor
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102933558 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmy03019]
    102933558 (RAE1)
   03036 Chromosome and associated proteins [BR:cmy03036]
    102933558 (RAE1)
Messenger RNA biogenesis [BR:cmy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102933558 (RAE1)
Chromosome and associated proteins [BR:cmy03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    102933558 (RAE1)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_C Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_RFWD3 ANAPC4_WD40 Beta-prop_IFT140_1st eIF2A NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_SPT8 B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 102933558
NCBI-ProteinID: XP_007059833
LinkDB
Position
13:complement(12367735..12380069)
AA seq 368 aa
MSLFGSTSGFGAGGTSMFGNTATDNHNPMKDIEVTSPPDDSIGCLAFSPLALPGNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHEAPVKTVHWIKAPNYSCVMTGSWDKTLKFWDTRSPTPMMTLQLPERCYCADVVH
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKVNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPAHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtttgtttggatcaacctcagggtttggagctggtggtaccagcatgtttggaaat
acagcaacagataatcacaaccccatgaaggatattgaagttacatctccacctgatgac
agcattggttgtttagctttcagtcccctagcattgccgggtaacttccttattgcagga
tcctgggcaaatgatgttcggtgttgggaagttcaagataatggacagacaattccgaaa
gctcagcagatgcacacaggacctgtgctagatgtgtgttggagtgatgatgggagtaaa
gtatttactgcctcttgtgataaaactgccaaaatgtgggatctcaacagtaaccaggcc
atacaaattgcacagcatgaagcccccgttaagactgtccattggattaaagcaccaaac
tatagctgtgtgatgacaggaagttgggataaaactttgaagttctgggatacacgatca
ccaactcctatgatgacattacagctgcctgaaagatgctactgtgccgatgtggtgcat
cccatggcagttgtcgcaactgcagaaaggggtttgatagtataccagttggagaatcag
ccttctgaatttagaagaatagaatctccactgaaacaccagcatcgctgtgttgctatt
tttaaagacaaggtgaacaaacctactggatttgcccttggaagtatagaaggaagggta
gcgattcactatatcaacccaccaaatccagccaaagataacttcacttttaaatgtcat
cgctccaatggaacaaacacatctgcacctcaggatatctatgctgtaaacgggatagca
tttcatcctgcccatggcacccttgcaactgtaggatctgatggtagattcagcttttgg
gataaagatgcacgaacaaagctaaaaacatcagaacagcttgaccagccgatatctgct
tgttgttttaaccataatgggaatatttttgcatatgcttccagttacgactggtccaag
ggccatgaattttataatccacaaaagaaaaactacatttttctgcgtaatgcagcagaa
gagttaaagcccaggaataagaagtaa

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