Chelonia mydas (green sea turtle): 102933586
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Entry
102933586 CDS
T02989
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X2
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cmy04990
]
102933586 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
cmy04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
102933586 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
NIDO
EGF_TEN
fn3
EGF_2
EGF_CA
EGF_3
EGF_Teneurin
cEGF
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_4th
Motif
Other DBs
NCBI-GeneID:
102933586
NCBI-ProteinID:
XP_027685379
LinkDB
All DBs
Position
9:complement(54905911..55028299)
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AA seq
1448 aa
AA seq
DB search
MRGLAGWLVILALGKWVWVEGVVPLADFYPFGLEQGDAVTLKQDDGGSGLQPISVKFPFF
GVGHTGLYVNNNGIISFLKEVSQFTPVAFPISKDRRVVAAFWADVDNRQAGEVYYRESKD
QTILQRATKDIGQYFPEFLEFSALWVFVATWHRVTFFGGSSFSPVNTFQIVLITDSKLSF
TIFNYESITWTTGMHASSGGDFAGLGGIAAQAGFNAGDGKRYFNIPGSRTDDIVDVEMTT
NVGIPGRWVFRIDDAQVQVGGCNNTTSVCLTLRPCLNGGKCIEDCITGNPSYTCSCLAGF
TGKRCHLDLDECLSHPCQNSATCINGINSFSCQCPPGFKGAMCETVESPCEMKECQNGGQ
CQVANKTAVCVCQAGYTGDSCEIEINECESSPCLHRGRCIDLVDNYTCVCVEPFVGQRCE
TDTSPCEDRSCRNRQTCNYIRPGRYICTCSPGYYGNNCQYGGPRMPNACLSSPCQHGGNC
LETEQGYVCECPEGYMGTDCRDKLSEDCECRNGGKCLDGNFTICQCPPGYFGHLCEFEVT
TTPCNMNTQCPDGGYCMEYGGSYLCVCHTDYGTNHSVPSPCDSEPCLNGGSCEAHDDSYT
CECPQGFNGRHCEKVRPRLCSSGPCRNGGTCKEADGEYHCACPYRFTGKHCEIGKPDSCA
SGPCQNGGTCFHYIGKYKCDCPPGYTGRHCEIAPSPCFLSPCENGATCEDNGSNYTCACP
AGYVGKLCQSEVDCGIPNEVKHAQVLFNSTRMGSLAEYQCERGYILSPQNNPRVCRAQGI
WSDPPECDEINECLSQPCFNRGLCKDRIAEFLCLCEAGYTGPHCELEIDECQSDPCKNGG
TCKDLPGSFACQCPDGFMGIQCETEVDACESAPCRNGGDCENYGGSYLCVCPEGFFGYHC
ETASDPCFYSPCGSRGYCLPSNGSHSCTCKVGYTGKSCEKELLPPTSLKVVRVEDTGVSI
SWYPPEDPVARQMIDGYAVTYVSFDGSYRRTDFVDRSHSAHQLRALASGRAYNISVFSVK
RNVNNKNDISRPVMLITRTRPRAVEGFDIANVTASTITVQWALHRLQHSSISKVRISIRQ
PGDLEDRTVELNSSVAKYTFRDLQPGERYLIHVSTLSGLETEDHPSESLAMAPFHVWTRP
LPPRNLTASRVSATSVYMTWDQPLAGSVEGYIINVTTNQSIKSRYVPNGKLSSYMVRDLL
PGQRYRLSMTAIQNTEQGQGHSEPAHVYILTLQRDGTPERRWGQAGHPRVLRNRLPPALL
PELRLLADHDILEEPSQAPRFTELVDGRRRISAKFSSLPSKSVTVRTQSEAPVKLENMEE
STNWVGLALQLLESENQKGNYDSRNCSTNPCKNGGTCVPGVEVYICDCIPGFKGRRCELA
CKKLPHSCTRLYSETKSFPVWEGGICHYLYKRVYKVHQDICYKESCESTASKKTGSRKQS
NNHALKKP
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcctggctggctggctggtgatcctagccctggggaaatgggtttgggtcgag
ggtgttgtgcctctggctgacttttacccctttggcttggagcagggggacgctgtcact
ttgaaacaggatgatggaggctccgggcttcaaccgatctcagtgaaattccctttcttt
ggagtgggacacacaggactgtatgtaaacaacaatggaatcatctctttcttgaaggag
gtttcccagtttacgccggttgctttcccaatctccaaagaccggcgtgtagtagcagct
ttctgggctgatgtggataaccgacaggcaggcgaagtgtattaccgggaaagtaaggac
cagaccatcttgcagagagccaccaaggacattggacagtatttccctgaattcctggag
ttctctgccctatgggtttttgtggccacctggcaccgggtgaccttctttggaggaagt
tccttttctccagtaaacaccttccagattgtcctcatcactgacagtaaactctccttt
accatcttcaactatgagtctattacttggaccacaggcatgcatgccagtagcggggga
gattttgctggcctgggaggcatcgcagcacaggcaggtttcaatgccggtgatggaaag
cgctacttcaacattcccggatcccgcaccgatgacatcgtcgacgtggagatgactaca
aatgtgggtatccccgggcgctgggtgttcagaatcgatgatgcccaggtgcaagtgggg
ggctgcaacaacacaacctccgtgtgtttgacgttacgcccctgtttgaacggggggaag
tgtattgaggactgcatcacgggaaatccctcctacacctgctcctgccttgcaggcttc
acgggcaagagatgtcatcttgatttggatgagtgtctttcccacccgtgtcagaacagt
gccacctgcatcaatggcatcaacagcttcagctgtcaatgcccaccagggttcaaagga
gccatgtgtgagacagtggagtcaccctgtgaaatgaaggagtgccagaatggcgggcag
tgccaagtggcaaacaagacagcggtgtgtgtgtgtcaggcaggatatacaggagactcc
tgcgagatagaaataaacgagtgcgaatccagcccctgcctgcacagggggcgctgcatc
gacctggtggataactacacatgtgtgtgtgtggagcccttcgtgggacagcgctgtgag
acagacacctcgccgtgtgaggataggagttgcaggaaccggcagacctgtaattacatc
cgcccaggacgctacatctgcacatgttcgccgggctactacggcaacaactgccagtat
ggtgggcccagaatgccaaatgcttgtctctccagtccatgccagcatggggggaactgt
ctggaaaccgaacaaggctatgtctgtgaatgcccagagggatatatgggcactgactgc
agagacaagctctctgaggactgcgaatgtcggaacgggggcaagtgtctggatggaaac
ttcaccatctgccagtgtccacccggatattttggacatctctgtgaatttgaagtgacc
actacaccttgcaatatgaacacacagtgtccggacgggggctactgcatggagtacggt
gggagctacctgtgcgtgtgtcatacggactatggcaccaaccactctgtgccatctccc
tgcgactcagagccctgcctgaacggggggtcctgcgaagcccatgatgattcatacacc
tgtgaatgtccccagggcttcaacggcaggcactgcgagaaagtcaggccaaggctgtgc
agctccgggccatgtcggaacggggggacatgtaaggaggcagacggagaataccactgt
gcctgcccctaccgattcactgggaagcactgcgagataggtaaaccagactcctgtgcc
tctgggccatgtcagaacgggggcacatgtttccactacatcggcaaatacaagtgtgac
tgtcccccaggctacacaggccggcactgtgagatagccccctctccttgtttcctgagt
ccatgtgaaaacggagccacctgcgaggacaatggcagcaactacacctgcgcgtgccct
gcgggatacgtgggaaagctctgccagtcagaggtggactgcggcattcccaacgaggtg
aagcatgcccaggtgctgtttaactccacccgcatgggctctctggctgaataccagtgt
gagcgaggctacatcttgagccctcagaacaatccccgtgtctgcagagcacagggcatc
tggagtgaccccccagagtgtgacgaaattaacgagtgcctttctcagccctgtttcaac
agaggcttatgcaaggatcgtatcgccgagttcctgtgcctgtgtgaagcaggatacaca
ggcccccactgtgagttggagattgatgaatgtcagtccgacccctgtaagaacggagga
acctgcaaggatctcccaggatcctttgcttgtcaatgtcctgatggcttcatgggaatc
cagtgtgaaacagaagtggatgcctgcgaatcagctccctgccgtaatggaggggactgt
gaaaactatggtggttcctacctgtgtgtctgcccagagggtttctttggctaccactgc
gagacggccagcgatccttgtttctacagcccgtgtgggagccgaggctattgcctgcct
agcaatggatcccacagctgcacctgcaaggtgggctacacaggcaagagctgcgaaaaa
gaactgctgccaccaacatcattaaaggtggtcagggtggaggacacaggggtgtcgatt
tcttggtacccccccgaagacccagtcgccaggcagatgattgacggctacgccgtgacg
tacgtatccttcgacggctcttaccgcaggacagattttgtggaccgaagtcattctgcc
caccaattgcgggcactagcctctggcagagcctacaatatttctgtcttttcagtcaaa
cgcaacgtgaacaacaagaacgacatcagcaggcctgtcatgctcatcacgcgcactaga
cctcgcgcagtggagggatttgatatcgccaacgtgacggccagcaccatcacggtgcag
tgggcactccacaggctccaacactcctccatcagcaaggtgcgcatctccatccgccag
cccggggacctggaggaccgcaccgtggagctgaacagcagtgtggccaagtacacattc
agggacctccagccaggggagaggtatctcatccacgtgtcaaccctgagtgggctggag
acggaagatcatccctcagagagcctggccatggcacccttccacgtgtggactcggcct
cttcctccccggaacctcactgcctccagagtcagcgccacctctgtctacatgacctgg
gatcagccgctggcggggtctgtggagggttacatcatcaacgtcaccactaatcagagc
atcaagagccgctatgtgcccaacgggaagctatcatcctacatggtgcgtgacctgctt
cccggtcagaggtatcgcttgtccatgacagccatccagaacaccgagcaaggccaaggg
cacagtgagccagcccatgtctacatcttgaccctgcagagggatggaactcctgagagg
cgatggggccaagcaggacacccacgggtgctcaggaacaggctccccccagcattgctg
ccagaactgcgcctgcttgcagatcatgacatcctggaggaaccctcgcaggctcccagg
tttactgagctggtggatggcagacggaggatcagtgccaagttcagcagcttgccgagc
aaatccgtcactgtgagaacacaatctgaggcaccagtgaagctggaaaacatggaggaa
tcaaccaattgggttggcctggcactgcagctgctggagtctgagaaccagaagggaaac
tacgatagccggaactgctccacaaacccctgcaaaaatggggggacctgtgtcccgggt
gtcgaggtctacatctgtgactgcatccccggcttcaagggcagacgctgtgaactagcc
tgcaagaagctgccccactcctgcactcggctgtactcagaaaccaagtcgtttcctgtc
tgggaaggcggcatctgccactacctatacaagagggtctacaaagtccaccaggacatc
tgctacaaggagagctgtgagagcactgcttcaaagaagacaggcagcagaaaacaaagt
aacaatcatgcactgaagaagccatag
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