Chelonia mydas (green sea turtle): 102933682
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Entry
102933682 CDS
T02989
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmy01009
]
102933682 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102933682 (HDAC6)
04131 Membrane trafficking [BR:
cmy04131
]
102933682 (HDAC6)
03036 Chromosome and associated proteins [BR:
cmy03036
]
102933682 (HDAC6)
Enzymes [BR:
cmy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102933682 (HDAC6)
Protein phosphatases and associated proteins [BR:
cmy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102933682 (HDAC6)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
102933682 (HDAC6)
Membrane trafficking [BR:
cmy04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
102933682 (HDAC6)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
102933682 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
102933682
NCBI-ProteinID:
XP_037744519
LinkDB
All DBs
Position
23:complement(18911121..18917528)
Genome browser
AA seq
1028 aa
AA seq
DB search
MKRGGRKGPPPRRSPGLPETKRRGRAQRMNKEAEELESGLRRLDLSVPGAVPVGTGLAFD
ERLTDFHCLWDDSFPERPERLAAVKGKLLQCGLWERCVPVEARLATEEEILLAHSQEYVE
LMKSTEQMSEQELRALSETYDSVFLHPDSYRCARLAGGCVLRLLEKVQSGELRNGLALVR
PPGHHAHRDKMDGYCMFNHLAIGARYAQQKLGVERVLIVDWDVHHGQGTQFLFEEDPSVL
YFSVHRYEQGRFWPHLPASDSPAVGQGRGEGFNVNVPWNAVGMRDGDYLAAFLHVFLPVA
FEFQPQLVLVAAGFDSVLGDPKGEMAVSPGCFAHLTHLLMALAGGKMLLSLEGGYNLNSL
AEGVCAALRTLLGDPCPRLEPPIAPCRSALSSVSGTLAIHEKYWRSLQRGETDTPPEAVD
EEPAPVEPPDPPEVPRPLPAARTGLVYDERMTEHYNMWDSQHPELPQRVSRIFQRHGELR
LTERCRRIPARSAEEEELRMCHSPAYVQTVKATASMKPRDLHRQGDQYNSIYICTSSYEC
ARLAAGSAFNAVQAVLEGEVQNAVAIVRPPGHHAESDTACGFCFFNSVALAARFAQRLAG
RPMRVMILDWDVHHGNGTQHMFEEDPSVLYVSLHRYDRGSFFPTSEDADADRVGVGPGRG
FTLNVPWNSPHMGDAEYLAAFHRLVLPVAYQFDPGLVLVSAGFDAARGDPLGGCLVSPEC
YAHMTHLLLGLAGGRVVLVLEGGYNLVSISESMTMCTRTLLGDPLPELGRLRAPHPSALQ
SLARASAVHRKYWTCLRLDAPIQEDSRPQSRQPGPIHEDSPPEAPSGGSQSPPGSEGSVD
DILRLGALCLSGEVGTDSGSPQLSPDSALVGGASPGEAEPPAAEESEDPPSLLDEAAALL
PTASVSLGVEFADTGTLYAVTPLPWCPHLDSLQPLPPAGLDVLAPCEECGSRGENWVCLA
CYQVLCGRYINQHMLAHGSLSGHPLVLSYADLSVWCYACQSYVHHLTLLPAKALAHRMKF
GADPAAGL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggggtggccggaagggccccccgccccgtcgcagccctgggctccccgaaacc
aagcgccgcggccgagcccagaggatgaacaaagaggcggaggagctggaatcggggctg
cggcgcctggatctgagcgtgccgggggcggtgcccgtggggacgggtctggcctttgac
gagcggctcactgacttccactgcctgtgggatgacagcttccccgagcgcccggagaga
ctcgcggccgtcaagggaaagttgctgcaatgcggcctgtgggagcgctgtgtcccggtg
gaggcccggctggctaccgaggaagagattctgctagcccacagccaggagtacgtggag
ctgatgaagtcgaccgagcagatgagcgagcaggagctcagggccctgtcggagacctac
gactccgtcttcctgcacccggattcgtaccgttgcgcccggctggctggtggctgcgtt
ctgcggctgctggagaaggtgcagagcggggagctgcgcaacgggctggcgctggtccgg
ccgccaggacaccacgcccaccgagataagatggacggttactgcatgttcaaccacctg
gccatcggggctagatatgcccagcaaaaactgggagtggaacgagtcttgatcgtcgac
tgggacgttcaccacgggcagggcacccagttcctcttcgaggaggatcccagcgttctc
tatttctccgtccatcgctatgagcaggggaggttctggccccacctgccagcgtccgac
agccccgccgtggggcagggccgtggagaggggttcaacgtcaacgtgccgtggaacgcg
gtgggaatgagggacggtgattatctcgctgcctttttacatgtcttcctgccagtggcc
tttgagttccaaccccagctggttctggtggccgccgggttcgactctgtgctcggggac
cccaagggcgagatggctgtgtcgcccgggtgcttcgctcacctgactcatctgctgatg
gccctggcgggcggcaagatgctgctgtctttggagggtggctacaatctgaactccctg
gctgagggggtctgtgcggccctgaggaccctcttgggggacccctgtccccggctggag
ccgcccattgccccctgtcgcagcgctctgagctccgtgtctgggacgctcgcgatccac
gagaaatactggcggagcctgcagagaggggagaccgacaccccccctgaggctgtggac
gaggagccagcccccgtggaacccccagaccctcctgaggtgccgcgacccctcccggct
gcccgcaccgggctggtgtatgacgaacgcatgacggagcattacaacatgtgggacagc
cagcacccagagctgccccagcgggtctcccgcatcttccagcgccacggggagctccgg
ctcacggaacggtgccgccggatcccggcccgcagcgctgaggaagaggagctgagaatg
tgtcacagcccggcgtacgtgcagacggtgaaggccacggccagcatgaagccacgggac
ctgcatcgccagggggaccagtacaactccatctacatctgcaccagctcctacgagtgt
gcccggctggccgccggctcggccttcaacgccgtgcaggccgtgctggagggcgaggtg
cagaatgccgtggccattgtccggccccccgggcatcacgccgagtccgacacggcctgt
ggcttctgcttcttcaattcggtagccctggcagctcgtttcgctcagcgcctggcggga
cggcccatgagggtgatgatcctggactgggatgttcaccacggcaacggtacccagcac
atgtttgaggaagatccgagcgtgctgtacgtctctctgcaccgctacgaccgcggctcc
ttcttccccacctcggaggacgccgacgccgaccgggtgggggtggggccgggccgcggc
ttcaccctcaacgtgccctggaacagcccccacatgggcgacgccgagtacctggccgcc
ttccaccgcctggtgctgcccgttgcctaccagttcgacccggggctggttctggtgtcg
gctgggttcgatgccgcccgcggcgacccactggggggctgcctggtgagccccgagtgt
tacgcccacatgacccacctcctgctggggctggcggggggccgggtcgtgctggtactg
gagggaggctacaacctggtgtctatctccgaatccatgaccatgtgcacccggaccctg
ctgggggaccccctgcccgagctggggcgcctgcgagctccccaccccagcgccctgcag
tcgctggcccgggcgagcgccgtgcaccgcaaatactggacctgcctgcggctggatgcg
ccgatccaggaggactcgaggccccaatccaggcagccgggccccatccatgaggactcc
ccaccagaggccccctcggggggctcccagagccccccaggctccgagggctccgtcgac
gacatcctgaggctcggagccctctgcctcagcggtgaggtggggaccgactcgggctcc
ccccagctgagccctgactccgccctggtgggcggggcttcccctggagaggcggaacct
ccagctgcagaggagtcagaggacccccccagcctcctggacgaagcagccgccctgctc
cccaccgcctctgtcagcctgggggtggagttcgcagacacggggacgctctacgctgtg
acccctctgccctggtgcccccacctggactcgctccagccccttcccccggccgggctg
gacgtgctggcgccatgtgaggaatgcggcagccggggcgagaactgggtctgcctggcc
tgttaccaggtgctctgcgggcgttacatcaatcagcacatgctggctcatggctccctt
tccggccaccccctggtgctgagttacgccgacctgtcggtctggtgctacgcctgtcaa
tcatacgtccatcacctgaccctgctgccagccaaggccctggctcaccgcatgaagttc
ggggcggacccggccgctgggctctga
DBGET
integrated database retrieval system
