Chelonia mydas (green sea turtle): 102933871
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Entry
102933871 CDS
T02989
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102933871
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmy04040
]
102933871
Ion channels [BR:
cmy04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102933871
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GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Ank_4
Motif
Other DBs
NCBI-GeneID:
102933871
NCBI-ProteinID:
XP_037736649
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Position
17:3652130..3666469
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AA seq
843 aa
AA seq
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MSSILGKMRKLGSSDVEDSEVTDEHTDGENSFLGTPDSLQGSQSTKVQQLPKSNIFARRG
RFGMGDSDKNMAPMDSLYQMDHLVSAPVIKFNINMERAKIHNQFAKLLSTNSIASCSEKA
FKFYDRRRIFDAVAQGDTSDLNDLLIYLHETRKHLTDNEFKEPETGKTCLLKAMLNLHDG
KNDTIPLLLEIAEKTGNLKELVNAEYIDNYYKGQTALHIAIERRNMYLVKLLVQNGADVH
ARAHGEFFRKIKGKPGFYFGELPLSLAACTNQLGIVKFLLENPYHPANIAGQDSMGNTVL
HALVEIADNTKDNTKFVTKVYNNILIVGAKINPMLKLEEITNKKGLTPLTLAAKKGKIGI
FAYILRREIKEPECRHLSRKFTEWAYGPVHSSLYDLSSIDTCEKNSVLEIIAYSSKTPNR
HEMLLVEPLNRLLQDKWDRFVKRLFYFNFFVYAMHVIILTIAAYFRPVEKHGKPPFKFEY
TTEECFRVTGEILSVLGGLYFFFRGIQYFLQRRPSLKTLLADSYSEVLFFVHSLLLLSSV
VLYFCGQELYVASMVFSLALGWTNMLYYTRGFQQMGIYSVMIEKMILRDLCRFMFVYLVF
LLGFSTAVVTLIEDDYEGQENNSSLCIRSGQLKRGRMSYNSLYYTCLELFKFTIGMGDLE
FTENYRFKSVFVILLVLYVILTYILLLNMLIALMGETVNKIAQESKSIWKLQRAITILNI
ENSYLNCMISSFRSGKRVLVGTTPDDKDDYRWCFRVDEVNWSTWNTNLGIINEEPGYSMG
LKRNSSFSFKSSRVSGKNWKTLVPLLRDGSRREEAQKQPEEAKLKPILEHDYEPEDSGAR
KSV
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccatccttggaaagatgaggaaacttggcagttctgatgtggaggactctgaa
gtcacggacgagcacacagatggtgagaattcctttctgggaacccctgacagccttcag
ggcagccagagcaccaaggtacagcagctgcccaaaagcaacatcttcgctagacgaggc
cgctttgggatgggggacagcgataagaacatggcgcccatggactccttgtaccagatg
gaccacctggtttctgctcccgtcatcaagtttaatatcaatatggaaagggcaaaaata
cacaatcagtttgccaagctcctatctaccaattccattgcaagctgctcagaaaaagct
ttcaagttctatgatcgtagaaggatctttgatgctgtagcccaaggtgacacaagtgat
ctgaatgacctgctgatctatctccatgagacccggaagcatctcacagacaatgagttc
aaagagccggaaactgggaaaacctgcttattgaaagccatgctgaatctgcatgatggg
aagaatgatacgattcccctgcttctggaaattgcagagaagacaggcaatctgaaagag
ttagttaatgcagaatatattgacaactactacaagggtcagactgctctccacattgcc
atcgagaggaggaatatgtacttggtgaagctcttggtccaaaatggagcagatgttcat
gcaagagcccatggagagttcttcagaaaaatcaaagggaaaccgggcttttattttggt
gaactgcctctttccctggctgcctgcaccaaccagctaggcattgtgaaattcctcctg
gagaatccgtatcatccagccaatatagctggccaggactctatgggcaatacagttctg
cacgcccttgtggagattgcagataacaccaaagataacaccaagtttgtaacaaaggtg
tataacaacattttgatcgttggtgccaaaattaacccgatgctgaagctggaagagatc
actaacaagaagggactgactcctttaaccctggctgcaaagaaagggaagatagggatt
ttcgcctatatccttagacgagagatcaaagagcctgagtgtaggcatctgtctagaaag
ttcaccgaatgggcctatggacccgtccactcatctctttatgacctgtcctccatagac
acgtgtgagaaaaactcagtgcttgagatcattgcgtatagcagcaaaacaccaaatcgc
catgagatgctgctggtagagcccctgaacaggctgctgcaggacaagtgggaccgattc
gtcaaacgcctattttacttcaacttctttgtttatgccatgcatgttatcatcctcacc
attgccgcctacttcagacctgtggagaaacatggaaagcctcccttcaaatttgaatac
accactgaggagtgttttcgagtcaccggagagatcctgagtgtgctgggaggtctctat
ttctttttcagagggatacagtatttcctgcagaggcggccctcattgaagactctgcta
gctgacagttacagtgaggttcttttctttgtccactcgttgttactgttgagttcagtg
gtgctgtacttctgtggccaggaactttatgtggcatccatggtgttctccttggcactg
ggctggactaacatgctgtactacacccgaggattccagcagatgggaatttactctgtc
atgattgagaagatgatcctgagggatttatgtcgcttcatgtttgtctacctagtattt
ctcttgggattttccacagctgtggtgactctgattgaagatgactatgagggacaagaa
aataacagctctctctgcatccgatcaggccagctgaagcgtggccgcatgtcgtacaac
agtctgtattacacctgcctggagctgttcaagttcaccattggcatgggagatctagag
ttcactgagaactacaggtttaagtctgtctttgtcatcctgttggtcctctacgtcatc
ctcacctacattctcctgctcaacatgctgattgcgctgatgggggaaactgtgaacaaa
atcgcgcaagagagtaagagcatctggaaactccagagagccatcaccatcttgaatatt
gaaaacagctacctgaactgcatgataagctcattccgatccgggaagcgagtcttagtg
ggaaccacacctgatgacaaggacgattacagatggtgtttcagagtcgatgaggtgaac
tggtccacgtggaacactaatctgggcataatcaacgaggagcccggatacagcatgggc
ttgaagcgaaactcaagtttttcttttaagtctagcagagtttcagggaaaaactggaag
accttggttccacttttgagagatgggagcaggcgagaggaggcacagaaacagccagaa
gaagccaagttaaaacccattttggaacatgattatgagcctgaagactctggggcaagg
aagtctgtgtag
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