Chelonia mydas (green sea turtle): 102933964
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Entry
102933964 CDS
T02989
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X2
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102933964 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmy03021
]
102933964 (POLR1A)
Enzymes [BR:
cmy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102933964 (POLR1A)
Transcription machinery [BR:
cmy03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
102933964 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Nop14
Motif
Other DBs
NCBI-GeneID:
102933964
NCBI-ProteinID:
XP_037754204
LinkDB
All DBs
Position
4:complement(127349481..127404243)
Genome browser
AA seq
1706 aa
AA seq
DB search
MRPPREVPWRRLAGISFGMYTAEEIRKLSVKAISNPRYLDNVGNPSVNGLYDLSLGPPDA
KEVCTTCMQDFNNCPGHLGHIDLPLTVYNPLFFDKLYLLIRGSCLNCHLLTCTRAVVHLL
LSQLKVLERGLLHAVCDLEAILNRFLDENTDASGLDIEEELNRHVNEILQNNQLGDQCSH
VKNVCECRSKLIAQFWKLHMTSKRCPNCKSRRSQVRKEHNSKLTVTYPTVVQQKSGKEAI
LEEPAIIDETQLGKRGYLTPITAKDHIVALWKNEGFFLNHLFSGLEVGENSGFSPDMFFL
DLLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDVQLIRKLLAFMAQEQSQPIQLVENE
IQKVTDEPLESLDRSVLAMISGQSTADKLYNIWIRLQSHVNIVFDSDMDKLMTEKYPGIR
QILEKKEGLFRKHMMGKRVDYAARSVICPDMYIATNEIGIPMVFATKLTYPQPVTPWNVK
ELRQAVINGPNVHPGASMIVNEDGSRTVLSATSQTQREAIAKQLLTPSTGVPKPGMKIVC
RHVKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFP
QSELGRAEAYMLACTDEQYLVPKDGKPLAGLIQDHMISGASMTIRGCFFTREQYMELIYR
GLTDKKGRVKILAPAIMKPQRLWTGKQVVSTLLINVIPENQIPLNLSGKAKIGGKAWVKG
PQNRIPGSNLDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCHEVYGGETGGKVLT
CLARLFTAYLQLYRGFTMGVEDILVKPQADHRRHRIIEVSTHCGTRAVRAAFNLPETASC
EEVQGKWQDAHLHKDQRDFNMVDLKFKEEVNNYSNEVNKACMPLGLHRSFPENNLQLMVQ
SGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPRSGGFVTGRFLTGI
KPAEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLSVRDSDGSVVQFLY
GEDGLDIPRTQFLQPRQFPFIADNYEVIQKSKHIDEVLSKIDPRQANQHFRAIKKWQTKH
QVSLPREGAFLLYSQKKMARVREQTLGGEIINGRDPATLQLLKMWYELDEKSRRKYLKRT
SKCPDPSLAVWRPDIYFASVSEAFESEVENYINEWNAQNNSNYVKSELSCDRLNSLLHLK
WQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANI
KTPMMSVPVFSTKKAHKKVKRLKKQFTRVCLAEVLQKVEVEESLCIEGKLSKHRLYQIKF
YFLPYEYYREEKCLKPRDILYFMETRFFKILLETIKRKSAKLASFNVVNTRKATRRDLDG
SGGESQENQDDHEADEEEAGRLVDGEADEGDADATDTKRREKQEEEVDYESEEENSEENG
DENPEEDEGMLNDDKRAEDAEEGVQNESNFQTKKEKGPKLEHSTQLRVSAVMSSHPSIVN
YAYDTESELWCEVSLKLPLMKAYFDLSSILTSLMQNTIVHETRGITRCFLNESTNKKGEK
EFVLNTEGINLPELFRYADLLDLSRLYSNDIHAMAKTYGIEAALRVIEREIKDVFAVYGI
VVDPRHLSLVADYMCFEGVYKPLNRFGMQSNSSPLQQMTFETSYKFLKEATMMGAHDELR
SPSACLVVGKVVRGGTGLFDLKQPLT
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgcccagagaggtgccgtggcggcggctggccggtatttccttcgggatgtac
acggccgaggagatcaggaaactaagtgtaaaagccataagcaaccctcgttacctagat
aacgtgggcaacccatcagtaaatggactgtatgacttgtctttgggacctcctgatgcc
aaagaagtgtgtaccacttgtatgcaggacttcaacaactgtcccggacacctaggccac
atagatctgccactgactgtctacaatcctctattttttgataaattataccttctgatc
cgaggttcttgtttaaactgtcacttgctgacctgtactcgagctgtggttcacctattg
cttagccagctgaaggtcttggagaggggattgcttcatgcggtctgtgatcttgaggcc
atcctgaataggtttttggatgaaaacacagatgcatctggtttagacatcgaagaagag
ttaaatcgtcatgtgaatgaaatactacaaaataatcaactaggagatcagtgctcacat
gtaaaaaacgtgtgtgagtgtaggagtaaactgattgcacagttttggaaactgcatatg
acttcaaagagatgcccaaactgcaaatctagaagatcacaggtacggaaagagcacaat
agcaagttgacagtaacctaccccactgtggtacagcagaagtctggcaaagaggccatc
ttggaggagccagcaattatagatgagactcagttggggaaaagaggttacttgacaccc
atcactgccaaagaccacattgtggctctgtggaagaatgaaggtttctttctaaatcac
ctcttctctggtctggaggtgggtgagaattcaggattcagccctgatatgttctttcta
gatctccttgtggttccaccttccaggtatcgtcctgtgaatcgtcttggagatcagatg
tttacaaatggtcaaactgtgaacttgcaggctgtcatgaaagatgtccaattaataagg
aagcttctggctttcatggctcaagaacaaagtcaaccaatacagcttgtagagaatgaa
atccagaaggtgacagatgagccattggaatcactggatcgctcagtcctggctatgatc
tcagggcagagcactgcagataaactgtacaacatttggattcgtcttcagagccatgtc
aatattgtgttcgacagtgacatggacaaactaatgacagaaaaatatcctggtatccgt
cagatactggagaaaaaggaaggactgttccgcaagcacatgatgggaaaacgtgtggat
tatgctgctcggtcagttatctgccctgacatgtacattgctaccaatgagattggtatt
cctatggtatttgctaccaaattgacttaccctcagccagtaactccgtggaatgtcaaa
gaactgaggcaggctgtcataaatggtccaaatgttcaccctggtgcctccatgatcgtt
aatgaagacgggtcacgtacggtgttgagtgcaaccagccagacccagagggaagccata
gctaagcagctcctcactccttccactggagtcccaaaaccaggaatgaaaattgtatgc
cgccatgttaaaaatggagatgtcctcttactgaaccgtcagcccacccttcacagaccc
tccatccaagcccaccgggccagaatcctgccaggagaaaaggtgctgaggcttcactat
gccaactgcaaagcctacaatgctgattttgatggcgatgaaatgaatgctcattttcct
cagagcgagctgggccgggcagaagcctacatgttagcctgcaccgatgaacagtatctt
gttcctaaggatggcaagccactggcaggtttgatccaggatcatatgatctctggtgcc
agcatgacgatccggggttgctttttcacaagagaacagtacatggagctgatatatcga
ggactgacagacaaaaagggaagagtgaaaatccttgcacctgccattatgaaaccacag
cggttatggacaggaaaacaggttgtttctacgttgctaataaacgtaatccctgaaaat
caaatcccactgaatttgtccgggaaagctaagattggtggaaaagcctgggtgaaaggg
ccccaaaacagaattcctggatctaaccttgattcaatgtgtgaatcccaggttatcatt
agagagggggagttactttgcggggtcttggacaaagctcactatggcagctctgcctat
ggcctagttcactgttgccatgaagtctatggtggtgaaaccggcggcaaggtgcttaca
tgtctagctcgcctctttactgcctatttgcagctgtacaggggatttacaatgggagtt
gaagatattttggtcaaaccgcaagcagaccacagaagacaccgaatcattgaagtgtcc
acccattgtggtaccagggctgttagagctgcatttaacttgccagaaactgcatcgtgt
gaagaggtccaagggaaatggcaggatgcccatctccacaaagaccagagggattttaat
atggttgatctgaaattcaaggaggaagtaaacaattacagcaatgaggttaacaaggca
tgcatgccccttggtctccacaggagcttcccagagaacaacttgcagttaatggtgcag
tcaggagccaaaggatccactgtaaatacaatgcagatttcgtgcttgctgggtcagatt
gagttggaaggtcgaaggccccctctgatggcatctggtaaatcgttgccttgtttccag
ccttatgatttttcccctagatcagggggatttgtgactggcagatttctcacaggcatc
aaacctgctgaattcttctttcactgcatggctggcagggaaggtctggtggatacagct
gtcaaaaccagccgatctggataccttcaaaggtgtatcataaagcacttggaagggctg
gtagttcagtatgacctgagtgtgagggacagcgatggcagcgtcgtgcagttcctgtat
ggtgaagacgggctagatatccccaggacccagttcctgcaacccaggcagtttcctttc
attgcagataactatgaggtgatacagaagtctaaacacatagatgaagttttatccaag
atagatcctcggcaagcaaatcaacatttcagagctatcaaaaagtggcaaaccaagcat
caagtttctttgccaagagaaggcgcttttctgctgtattctcagaaaaaaatggcgaga
gtgagggaacagaccctaggaggagagatcataaatggcagagaccctgcaaccctacag
ttactgaagatgtggtatgaactggatgagaagagccggagaaaatatctaaagaggacc
tctaagtgtccagaccccagcctggccgtctggcgtccagatatttattttgcatctgtt
tcagaagcatttgaaagtgaagtagagaattacatcaatgaatggaatgctcagaacaat
agcaactatgtaaaatcagagctttcttgtgatagattaaacagcttgttgcatttgaag
tggcaaaggtccctgtgtgacccaggagaggctgtgggtctccttgcggctcaaagcatt
ggggagccttccacgcagatgactctgaacacctttcattttgctggcagaggtgaaatg
aatgtcacattgggtattccaaggttgcgggagatcctcatggtagctagtgctaacatc
aaaactccaatgatgagcgttcctgtgtttagtaccaagaaagctcacaagaaggtgaaa
aggcttaagaaacagtttacaagagtgtgcttagccgaggtcttgcaaaaagttgaagtt
gaggagtctctgtgcatagaagggaagctaagcaaacaccgtctctaccaaatcaaattt
tatttcctgccatatgaatactatcgggaggagaagtgtctgaagccgagggacatctta
tacttcatggaaacacgattctttaaaatcttgctggaaacgattaaaaggaagagtgca
aagctggcgtctttcaatgtggtcaatactcgtaaagcaactcggagggatctagatggc
agtggtggagaatcccaagaaaaccaggatgatcatgaagctgatgaggaggaagcaggg
aggctcgttgatggtgaagcagatgaaggggatgctgatgctacagatacaaaacgaaga
gagaagcaggaagaagaggttgattatgagagcgaggaagagaacagtgaggaaaatggt
gacgaaaatccagaagaggacgaaggcatgttgaatgatgataaaagggctgaggatgct
gaagaaggggttcagaatgaatctaattttcagactaaaaaagaaaaaggacccaaacta
gagcattcaacacagctaagagttagtgctgtgatgagcagtcatccatctatagtcaac
tatgcatatgatacagaaagtgagctctggtgtgaggtttcactaaagcttcctctgatg
aaggcatacttcgacctctcctccatcctaacgtccctcatgcagaacacaattgtccat
gagacaagagggatcacgcggtgcttcttaaatgaaagcaccaataagaaaggagagaaa
gaatttgttttaaacactgagggaataaacctcccagagctattcagatatgctgatctt
ttggacctaagtcggctttattccaatgacattcatgcaatggctaagacctatggaatc
gaggctgccctgagggtgattgaaagggaaattaaagatgtgtttgctgtgtatggtatt
gtggtagatcctcggcacctttctcttgtggcagattacatgtgttttgaaggtgtttac
aaaccgctgaatcgttttggaatgcagtccaactcctcccctctgcaacagatgacgttt
gaaaccagctacaaatttttgaaggaagcaacaatgatgggtgcccatgatgagctgaga
tctccttctgcatgcctggtggtaggaaaagttgtcagaggagggactggtttgtttgac
ctcaagcaaccccttacatag
DBGET
integrated database retrieval system
