Chelonia mydas (green sea turtle): 102933966
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Entry
102933966 CDS
T02989
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X2
KO
K06237
collagen type IV alpha
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04382
Cornified envelope formation
cmy04510
Focal adhesion
cmy04512
ECM-receptor interaction
cmy04518
Integrin signaling
cmy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102933966 (COL4A2)
04518 Integrin signaling
102933966 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102933966 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102933966 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
102933966 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmy04147
]
102933966 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
cmy00536
]
102933966 (COL4A2)
Exosome [BR:
cmy04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102933966 (COL4A2)
Glycosaminoglycan binding proteins [BR:
cmy00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102933966 (COL4A2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
102933966
NCBI-ProteinID:
XP_037752702
LinkDB
All DBs
Position
1
Genome browser
AA seq
1728 aa
AA seq
DB search
MGDEAKMRSSRFLLSRRALWQAMQVVLLLVLTSLLTGRVKAGGKSYTGPCGGRDCSRGCE
CFPEKGGRGQPGLLGPQGFPGPPGLMGIPGLEGHKGHKGERGQPGVTGPKGEVGLRGVTG
FPGADGVPGHPGQPGSRGKPGHDGCNGTRGDAGEQGSQGPSGQPGFFGIQGPKGQKGEPF
VMTPELASKFRGEPGEPGLLGFPGPQGALGVVGLIGPTGNPGRPGPPGPPGPPGPPGNRG
LGFYGEKGEKGEIGPEGPPGLPSTGELVVSPDTILEEQYKGEKGKKGETGEPGTQGLPAY
SAEGGEEGIIGFPGLRGLPGINGIPGAAGEKGFQGFDGMPGSSGPKGMKGEQGERGFQGP
PVYTQYPIRRKGVRGDPGLPGVPGPAGDLGDQGDPGLPGLPGSSDGFPDGSERRGLRGEM
GPKGFSGEPGFLATKPGPPGSDGKPGLPGFPGPPGLPGTPGYPFGLKGRQGDPGEAGSRG
FPGFRGQKGFKGETGDCKCIESEEARRGPAGPPGPPGFPGPTGHPGRKGDNGDQGQHGLP
GFSGAKGFPGAVGFPGPKGEKGDSRYVTTKGTKGDPGGPGLSGIKGEDGFPGKDGIDGLP
GLPGLPGDGVRGSPGDPGYPGTQGEKGFLGEIGLPGAGLPGLKGYHGPPGDSGTYGNPGL
QGPPGPRGTPAQLDCNQVTEDLSRGDGTKTVWSGAECVRAPKGAPGKPGLPGAIGAKGAK
GIPGEPGLDGFQGLKGSQGDPGREGFPGPRGFTGSRGDGGPPGLPGLQGNPGSAGKQGAP
GPAGPKGIAGEVLGAAPGTPGDFGPSGFPGLKGLQGDHGVPGIRGAGGTPGLTGSKGQQG
PPGPLGLPGLPGRPGLHGFPGLPGQQGSPGRTGSPGFVGSLGARGDQGDQGFPGPVGMKG
LAGDKGELGNKGVQGTPGVPGLPGIDGMPGFPGLKGAKGSPGIGGFKGMLGQKGKPGLKG
IKGEVGFFGNLGFKGLQGEPGHKGDRGDQGPAGKPPKIILSMLSEVKGEKGDIGETGLKG
GLGFKGTKGMPGLPGKPGVPGLPGSTSHIEGEKGEAGIKGVTGVQGYPGTIGPPGIRGFP
GTTGIRGEKGIEGIRGDYGRPGFAGQTGDQGDTINLPGSAGLKGEAGVTGSLGVKGTRGD
KGEGGNPGFIGIEGLKGTQGFPGLKGQKGFPGLVGPPGSQGDPGIPGFQGEKGSHGWPGV
AGKAGLPGFRGISGLDGLPGSKGLPGSPGPDAYGAEGFPGIYGDKGEAGNPSTIEGARGA
PGQKGERGNPGERGPVGNLGSDGIPGFPGVSNISGIPGDVGSPGLDGVPGYPGPRGRPGI
LAPGGSKGEDGQIGVLGEDGQKGPRGDPGPPGRTGISGYPGPKGHKGAQGLMGTLGLVGA
FGDTGPTGPKGDRGPTGFQGPPGSPGLPAVPPKLVTHQGTAGPRGNIGPQGISGEMGPHG
PPGDPGFRGPPGKPGFQGRGGMSALPGFRGDQGPSGFPGLAGFEGEPGRPGNPGLPGMPG
RSVNIGYLLVKHSQSEQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFST
MPFLYCNPGDVCYYANRNDKSYWLSTTAPLPMMPVAEEEIRPYISRCSVCEAPAVAIAVH
SQDVSIPHCPEGWRSLWIGYSFLMHTGAGDEGGGQSLVSPGSCLEDFRATPFIECNGARG
TCHYYANKYSFWLTTINQQFQSLPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgaagcaaagatgagaagctcgcggttcctcctctcacgtcgtgccctttgg
caggctatgcaggtcgtgctgctcttggtgttgacctcactgttaactggcagagtaaaa
gctggtggaaaatcttacacaggaccatgtggaggaagagactgtagtaggggatgtgaa
tgtttccctgaaaaagggggccgtggtcaaccaggactacttggacctcagggattccct
ggaccaccgggattaatgggtatcccaggtttagaaggtcacaaaggtcacaaaggtgaa
agagggcaacctggagtaactggaccaaaaggagaagtggggctaagaggagtaactggt
ttccctggtgcagatggtgttcctggtcatcctggtcagccaggatcaagggggaaacca
ggtcacgatggctgcaatgggaccagaggtgatgctggtgaacaaggaagtcaggggccc
agtggtcaacctggtttctttggaatccaaggaccaaaaggtcagaagggggaacctttt
gtaatgactcctgaactagcaagcaaattcaggggagagcctggtgagccgggattgttg
ggctttccaggacctcaaggtgctctcggtgttgtgggtttaattggtccaacaggaaat
ccaggaagaccaggaccacccgggccaccgggacccccaggaccaccaggcaacaggggc
cttggtttttatggagaaaaaggtgaaaagggtgaaataggtccagagggccctcctggg
cttccatctacgggggagctggtagtttccccagacacaatcctagaagaacaatacaag
ggtgaaaagggaaaaaaaggagaaacaggagaacctggaactcaaggtttacccgcatat
tcagcagaaggtggagaagaaggaataataggttttccaggactaaggggattacctggt
atcaatggcatcccaggagctgctggggaaaaaggttttcaaggatttgatggcatgcca
ggcagcagtggtcctaaaggaatgaagggagagcagggtgagagaggttttcagggacca
cctgtttatactcagtatcccattcgaagaaaaggtgtaagaggtgatccaggattgcca
ggtgttcctggacctgcaggagacctgggggaccaaggagatcctggccttcctggtctt
cctggatcgtcagatggctttcctgatggctctgaaagaagaggtttacgtggggaaatg
ggtcctaaaggttttagtggagaaccaggttttctagcaacaaagccaggtccacccggt
agtgatggtaaacctggacttccaggattccctggcccacctggccttccaggaacgcca
ggctatccttttggactgaagggacgtcaaggggatccaggtgaggcgggcagccgaggt
ttccctgggttccgaggacaaaaaggatttaaaggtgaaacaggggactgtaaatgtatt
gaaagtgaggaagccagacggggtcctgctggtccacctggtccaccaggttttccaggc
ccaactggacatcctgggcggaaaggagataatggagatcaaggtcagcatggtcttcca
ggcttctctggtgcaaaaggatttcccggtgcagtcggatttcctgggccaaaaggggag
aaaggagattctagatatgttacaacaaaaggtaccaaaggagacccaggaggtcctgga
ctatctggcattaaaggtgaagatgggtttccaggaaaagatggtatagatggcttacca
gggcttcctggccttccaggtgatggagtaagaggttcaccaggtgaccctggttatcca
ggaacacaaggtgaaaaaggctttctgggagagattggtctgccaggtgcaggcttacct
ggcctgaaaggataccatggccctccaggtgattctggaacatatggaaatccaggactt
caaggtcccccaggtcctcgaggtacacctgcccaattagattgtaaccaagttactgaa
gatctttctaggggagatggcaccaagacagtttggtcaggggcagaatgcgtgagagca
ccaaaaggagccccaggaaagccaggattgccaggagctataggtgcaaaaggtgctaaa
gggattccaggtgaaccaggtctggatggattccaagggctaaaaggttcacaaggtgat
ccaggtcgtgaaggatttccaggtcctcgaggttttactggatcccggggagatggaggc
ccaccaggtctaccagggctacaggggaatccaggcagtgcaggaaaacaaggtgcccca
gggcctgcaggtccaaaaggaattgcaggtgaagttttaggagcagcaccgggcacccca
ggggattttggaccatctggattcccaggattgaaaggcctacaaggagatcatggagta
ccaggaattagaggagctggtggtactccaggtttgacaggatccaaaggacagcaagga
cccccaggtcctcttggtttgcctggcctgccaggacgaccaggattgcatggattccca
gggcttccaggacagcaaggatctcccggcagaactggctcaccaggatttgttggttca
cttggtgccagaggagatcaaggtgaccaaggttttcctggtccagtgggcatgaaaggt
ctggccggtgacaaaggtgaactcggtaacaaaggagtacaaggaacacctggggtgcct
ggtctcccgggaatagacggaatgcctggttttccagggttaaaaggtgctaaaggttca
cctggtattggaggtttcaaaggtatgttaggccagaaaggaaaaccaggactcaaagga
atcaaaggcgaagttggcttttttggcaatctgggttttaaaggtctacagggggaacca
ggccataaaggtgaccgtggggaccagggtccagcaggaaaaccaccaaagatcatatta
agcatgctgtctgaggttaaaggtgagaaaggagatataggagagactggcctaaaagga
ggtttaggctttaaaggtactaaaggaatgccaggcttacctggcaaaccaggagttcca
ggtttgcctggatcaactagtcacattgaaggtgagaaaggagaggctggtattaaagga
gtgacaggtgttcaggggtatcctggtacaattggacctcctggcatacgaggtttccct
ggtaccactggaatcaggggtgaaaagggtattgaaggaatcagaggtgattatggtaga
cctggctttgctgggcaaactggtgatcaaggagatactataaacttaccaggaagcgca
ggtctgaaaggagaagctggtgtaactggatcattgggtgtgaaaggaaccagaggagat
aaaggtgaaggaggtaatcctggttttattggcattgaaggcctaaaaggcacccaaggt
tttcccggtttaaaagggcaaaaaggcttcccaggactggttggaccaccaggatcacag
ggagacccaggtattcctggatttcaaggtgaaaaaggaagtcatggatggcctggtgta
gcgggaaaagcaggtttacctggcttccgaggaatcagtggattggatggtttgccaggc
agtaagggcttgccaggctccccaggtccagatgcatatggggctgaaggtttcccaggt
atttatggtgacaaaggggaagcaggcaatccgagcactattgaaggcgccagaggagca
ccaggccagaaaggcgagagaggcaatccaggggaacgaggcccagttggtaacctgggg
tctgatggaattccaggctttcctggagtttcaaacatatcaggaatacctggtgatgtg
ggttctccaggtctagatggagtgccaggctatccaggaccacggggcagacctggaatt
ttagctccaggaggaagcaaaggagaagatggtcaaataggtgtgcttggagaagatggt
caaaaaggacctagaggtgaccctggaccaccagggagaactggaatttcagggtaccct
ggaccaaaagggcataaaggcgcacaaggtctcatgggtactcttggcttagtgggagct
tttggtgacacagggcccactggacccaagggggacagaggacctactggttttcaagga
cctccaggttctcctgggctgcctgcagttccccctaagctggtcactcaccagggtaca
gcaggcccacgtggaaatataggtccccaaggaatatctggtgagatggggccccacggt
ccaccaggtgatccaggttttagaggcccaccaggtaagccagggttccaaggaagaggt
ggcatgtcagctcttccaggttttagaggagatcaaggaccatcaggtttcccgggtcta
gcaggctttgagggtgaaccaggccgtccaggtaaccctgggctaccaggtatgccaggt
cgcagtgttaacattgggtaccttctggtgaagcatagccagtctgaacaagagccaatg
tgcccagttggtatgaacaaactctggagtggctacagtctactgtattttgaaggacag
gaaaaagcacataaccaggaccttgggctggctggatcctgtttggctcgttttagtacc
atgcctttcctctactgtaaccctggggatgtctgttattatgcaaacagaaatgataaa
tcctactggctctcaaccacagcacctcttccaatgatgcccgtggcagaagaagaaatt
agaccatatatcagtcgttgttccgtctgtgaagccccagctgttgcaattgctgtccat
agtcaagatgtttctattccgcactgccctgaagggtggcgcagtttatggattggatat
tccttcctcatgcacactggagctggtgatgaaggtggaggacagtcactggtttctcct
gggagctgtctggaagacttcagagctactcctttcattgaatgcaatggtgcccgagga
acctgccactactatgcaaacaagtatagcttctggcttaccactattaaccagcaattc
cagagcttgccctcagcagatacgctcaaggcaggtctcatccgaactcatatcagcaga
tgtcaagtgtgcatgaaaaatttgtaa
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integrated database retrieval system
