Chelonia mydas (green sea turtle): 102934078
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Entry
102934078 CDS
T02989
Symbol
NWD1
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cmy04990
]
102934078 (NWD1)
Domain-containing proteins not elsewhere classified [BR:
cmy04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
102934078 (NWD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
NACHT
Beta-prop_CAF1B_HIR1
AAA_16
NBCH_WD40
NPHP3_N
ANAPC4_WD40
Beta-prop_SCAP
ATPase_2
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
DUF4062
Prot_ATP_ID_OB_C
AAA
AAA_22
Beta-prop_WDR75_1st
AAA_5
Beta-prop_Vps41
APAF1_C
nSTAND1
RNA_helicase
ResIII
AAA_28
Bac_DnaA
RuvB_N
Spore_III_AA
Motif
Other DBs
NCBI-GeneID:
102934078
NCBI-ProteinID:
XP_027689953
LinkDB
All DBs
Position
25:complement(15878075..15903072)
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AA seq
1638 aa
AA seq
DB search
MVPLPFQPSSVVRIFISSASSALVELSQLDLIRLLCLDPKMLHLCALNLPLVKTWLQRER
PCLRQHTLRXQAFCQKHSLMFEVIDLRWGVCDIIDTDHMSTQLCLEEIESCQKLSVGPTF
IGLLGDRYGHRPLPRLIEEKEFEALIAQLTGDPTATHLLTFWYWKDENAIPSVYVLQPIT
DHLPHCHPTANQAQHQENMEVWRSVERNLASALRLAAREAEKHGLFSQEQRHRYDKSGVP
QQTEWEIEHGLFRTQEIDLAVSIFLREVEGLDKHLLGGTSMQLLDTEENGSLDNEAQQLL
HSLKAKIANHYPQHLKVHTVPWNAHSGNPQYKGQTKYLKELCEQFITATNHQVLRSLRYR
GKNSEEPEGLLQELSHHMMRCLESCRVFCGRQDLLDNILQSIRQNDDHVHTPLILYGPPG
CGKTALMCKLSEQVRTLLGQETVVVIRQLGTSQLSSAIHSLLRDICFQVCLAFGLPPLPV
QVTQACSDLILFFHNLLLTVSHFGVQSLVLFFDSVDQLIPADGAHRLYWLPKDCPSKVHI
VVSTSTAEQGILETLQEAMPEPEAYFEVGPLSREEGGKMLEVLLASVRRKLSPAQQTVLQ
HSFLEGGHPLLFKLAFNEARRWASYTLPSALMIATTAQEAMHHLCGRLEKLHGTVLVAHV
LGYIASSRNGLSDAEMKDILSLDDEVLSEIYQHGSPPCKTILRFPPLLWARLRRDIGECL
AERQADGFALLGLAHRQFTEVVQNRYLPAQDKTKRHLLLADFFRGTWSWGMKKSLKLPLL
GKSLNADRKVAPQPLWFSDTVANRRKLSELPFHLLNAGRIEELKQDVLGNMNWITCKIVA
TGIQGIANDFAMCNEHINCPELRLMQETLLLLKPALDYIDGGVGVSIIYTEVLARLHFFM
LSYPDLIGKLCQQCLSWLNVCPHPVLVPLCGFLQPPGGPLKMTITGFLKGVTVLELSSDH
RVLVAGSQDGTMVVWIMEDIEVMHTLTGHSAEVRCVKVFGKGTSAVSAAMDYTLRIWNLV
SGRQKFSIQDTHSGDQHLYQLHVDERNRIVYSASGTKVNAWHLETAEHIFQISGEAPDAW
LCTEVFEPRQVVLTVSEGGMLSLWDSSTGELQSKHQLSGLQEEAPTCSILIQKQGKMIVG
FSRGSLSMIFSDGNSLMKKLPGRVRFLVVSEDESLLAAGFGVYVRVFLDNSKGFHRFMAE
DLEHECVVHSAVFSPDNSIIVTGSQGESIQVWSLSEQGLLIDTLDGMGTPVTLLALCGHT
LVSASHIAPYLKVWDLTYDRKHKTLAPVPDRTGCTAMSHDGNYVYFPQAGERHQVIIWDS
TKGAECDTLDTSAQVRCLEVAEQRKLLFAGLMSGTVLVFPLNSRQDVVCIPPPKSQKPIN
HMALNRQEEQLAIACDDLVLVLDVSPGEPCPVIDKPIYTFYTQIPAAVISSVAVLANYRV
LYGMSSGDMFLYDCPHSKVFPLEMHRCKVTCLETSHGEQWALSGSEDSLQCLWDLELCQW
EHEMCYYKTSFLKGIQCACFSKDDKYLYTGSFDHSITVWDVLSGALLAVQFVYATASRIM
PTADGFVATTRLGYIIRERFHCPQSISSQYNPLQNIKATCVVKSRKKEEANPREKHDRGK
ISRNQSQTNKLSQNCMIM
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atggtccctttgcccttccagccatccagtgtcgtccgaatcttcatcagctcagcttcc
tcagccctggtagagctctctcagttagacctcatcaggctgctgtgtttggatcccaag
atgctacacctgtgcgctcttaaccttcccttggtcaaaacatggctacagagagagaga
ccctgcttaaggcagcataccctgaggntccaagccttctgtcagaagcacagtttaatg
tttgaagtaattgacctgagatggggtgtttgcgacattatagacactgatcacatgagc
acacaactctgtctggaggagattgaatcctgtcaaaaactgtcagtgggtcccactttt
atcgggctgcttggggatcgctatggacaccggcccctcccccgacttattgaagagaag
gagtttgaggccctgattgcacagctgacaggagaccccaccgccacacatctcctgaca
ttttggtactggaaggatgagaacgccattccttctgtgtatgtcctgcagccaattact
gaccacctgccccactgccaccccactgccaaccaggctcagcaccaggaaaatatggag
gtctggaggagcgtggagagaaacttggcctcagcactgcgcctggcagcccgggaagca
gagaagcacggactcttcagccaagaacagaggcatcgctatgacaaatcaggtgtgccc
caacagacagagtgggagattgaacacggcctcttcaggacccaagagatcgacttggct
gtttccatattcctcagagaggttgagggccttgacaaacacctgctgggagggacaagc
atgcaactgctggatacagaggaaaatggcagcctggacaatgaagcccaacagctgctc
cacagtctcaaggcaaaaattgcaaaccattacccccagcatctcaaagtgcacacagtc
ccatggaatgcacactctgggaacccgcaatacaaggggcaaaccaagtacctgaaggag
ctgtgtgaacagttcatcactgctaccaatcaccaggtcctgagaagcctccgatatcga
gggaagaacagcgaggagccagaggggcttttgcaggagctgagccaccacatgatgcgg
tgcctggagagttgcagagtgttctgtgggaggcaagacttactggataacattctacaa
agcatcagacagaatgatgaccacgtccacacacccctcattctctatgggcctccaggc
tgtggaaagacagccctgatgtgcaaactgtctgagcaggtgcgaactctcctggggcag
gagactgtggtggtaattcgccagctggggacatcccagctcagctctgcaatccacagc
ctgctgagggatatttgtttccaggtgtgtttagcatttggtttgccacctcttcctgta
caggtaacacaggcttgcagtgatttaatcctgttcttccacaacctcctcctcactgtc
tctcactttggtgtacagtcactggtgctgttctttgactctgtggaccagctaatccct
gctgatggtgcccacagactatactggctgcctaaagactgcccctcaaaggttcacatt
gttgtctccacttccacagcagagcaagggattctggaaactctccaagaggccatgcct
gagcccgaggcctactttgaagtgggtccattatccagagaggaaggtgggaagatgttg
gaggtgctattggcatcagtgagacggaagctgagcccagctcagcagactgttctccag
cacagcttccttgagggtgggcaccccctgctattcaagctggccttcaatgaggccagg
agatgggcatcctacactctgccttcagcactgatgattgctaccacagcccaagaggcc
atgcaccatctatgcgggagactggaaaagctgcatggcacagtcctggtggcacacgtg
ctggggtatattgcctcctcacggaatgggctatcagatgcagagatgaaggacatcttg
tcccttgatgatgaggttctctctgagatttaccagcatggctctcctccatgtaaaacc
atcctgcgctttcctcctctgctgtgggcacgactgcgccgtgacattggagagtgcttg
gcagagaggcaggcagacggctttgcgcttcttggccttgctcacagacaatttactgaa
gtggtgcagaatcgttatctaccagcccaagacaaaaccaagcgccacttgctcctggca
gatttcttcagggggacttggagttggggcatgaagaagtccctgaaactgccacttctt
ggcaaatcgctgaatgctgacaggaaggtagcacctcagccactctggttctctgatacc
gttgcaaatcggaggaagctaagcgaactgccttttcacttactcaacgctgggagaatt
gaggagctaaagcaagatgtgctggggaatatgaactggatcacctgtaaaatcgttgcc
actggaattcagggcattgccaatgactttgccatgtgcaatgagcatattaactgccca
gagctacgtcttatgcaagaaacccttctccttttgaaaccagcacttgactatatagat
ggtggtgtaggagtgagtattatatacactgaggtgctggccaggctgcattttttcatg
ctttcctatcctgatctaattggaaagctgtgccagcagtgtctgagctggctcaatgtc
tgtccccatcctgttcttgtcccactatgtggattcctccagccacctggtgggcctctt
aagatgacaatcactggatttctaaaaggtgtgacagtgctggagctcagttctgatcac
agagtgctggtggcaggatctcaggatggcacgatggttgtgtggatcatggaggatatt
gaggtgatgcacaccttgactgggcactctgctgaggtgagatgtgtgaaagtgtttgga
aaaggtacttccgctgtctcagctgccatggattacactctacgcatctggaatttagtc
tctggcagacagaagttttccattcaggacactcactctggagaccagcacctatatcag
cttcatgtggatgaaaggaacaggattgtgtattcagcatcaggtacaaaggttaatgcc
tggcacctggaaacagcggaacatattttccagatttctggtgaggccccagatgcgtgg
ctgtgcactgaagtgtttgaaccaaggcaggtggttttgactgtgtctgaaggaggaatg
ctgagtctgtgggacagcagcacgggagagctccagtctaagcaccagctatcagggcta
caggaagaagctccaacttgcagcattctgatccagaagcaaggaaagatgatagtagga
tttagcaggggttccctctccatgatcttctctgatggaaacagcttaatgaagaaactt
ccaggaagggttcgctttctagtagtgtcagaagatgagtcccttcttgctgcaggcttt
ggggtgtatgtgcgagtgttcctggacaactcaaagggattccacaggttcatggcagaa
gacctggaacatgagtgtgtggtgcactcagctgttttctctcctgacaacagcatcatt
gtcacaggctctcagggtgaatctatccaggtgtggagtttatcagagcagggtttgctg
atagacactttggatggcatgggaacaccagtgactctcttagccctatgtggccacaca
ttggtatctgcctcccatattgcaccatatctcaaagtttgggacctcacttatgatcgt
aagcacaaaaccttagcaccagtcccagatcgcacagggtgcactgcaatgtcccatgat
gggaactatgtctacttccctcaagccggagagagacatcaagtcatcatctgggactcc
actaaaggtgcagagtgtgacacactggacacctctgcccaagtgagatgtctagaggtg
gctgagcagaggaagctccttttcgctgggctgatgtctggaacggtccttgtttttcca
cttaattccaggcaggatgtggtgtgcatcccacccccgaagtcacagaaaccaatcaac
cacatggcactcaacaggcaggaagagcagctagctatagcatgtgacgacttagttctt
gtgctggacgttagccctggagagccatgccctgtgattgacaagcccatttataccttt
tatactcagatccctgctgctgtgatttccagtgtggctgtccttgcaaactaccgggtc
ctctatggcatgtcaagtggggacatgttcctttacgactgccctcattccaaagtgttt
cctttggaaatgcacagatgcaaagtcacctgtttagaaaccagccatggagagcaatgg
gcactaagtggctctgaagattctctgcagtgtctctgggacttggagctctgccagtgg
gaacatgaaatgtgctattataagacttccttcttgaaaggtattcagtgcgcttgcttc
tcgaaagatgataagtacttgtacactgggtcattcgatcactccattacagtttgggat
gttttaagtggtgccctattggctgttcaatttgtgtatgcaactgctagcagaatcatg
ccaactgcagatgggttcgttgcaacaacaagactcggctacataattcgtgagaggttc
cactgcccacaatccataagctcacagtataatccactccagaacatcaaggcaacatgt
gtagtaaaatccagaaagaaagaggaggcaaacccaagagagaaacatgacagaggaaaa
atctccagaaaccagagtcaaaccaataaactctctcaaaactgtatgatcatgtaa
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integrated database retrieval system
