Chelonia mydas (green sea turtle): 102934107
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Entry
102934107 CDS
T02989
Symbol
CDH5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04514
Cell adhesion molecules
cmy04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102934107 (CDH5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102934107 (CDH5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmy04515
]
102934107 (CDH5)
04090 CD molecules [BR:
cmy04090
]
102934107 (CDH5)
Cell adhesion molecules [BR:
cmy04515
]
Cadherins
Major cadherins
102934107 (CDH5)
CD molecules [BR:
cmy04090
]
Proteins
102934107 (CDH5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
DUF5673
DUF443
Motif
Other DBs
NCBI-GeneID:
102934107
NCBI-ProteinID:
XP_027676935
LinkDB
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Position
12:complement(25492435..25545936)
Genome browser
AA seq
771 aa
AA seq
DB search
MKTLILLFSLILAPASAYTEDFKTKLILSPNSHKRFKREWIWNQMHIMEEINSPLPHHVG
KITSSARKKNAMYVLEGEYANSIFKVREDTGDVYAFERLDREKKSEYNLTAHCIDRTTNK
ALEPPSTFIIKVYDVNDNVPVFVQKAFNGSVPEMSPVGTSVTKVTAVDADDPTVAGHATV
IYQVIQGERYFTVDESGVISTATADLDRETQSTYEIVVKAKDSPGLHGGDSSTATVIITL
SDINDNFPTFKQQSFHFKVPENIRVGSEVGRLKVEDIDEPQNRNTKYNFVRGHYRDTFEI
IPNAFTNEGIIKPKKPLDYEKIKEYKFDIEATDPTVNMRFFKSGGPKSIAAITIEILDVD
EPPIFSQPSYVYKIKENYLPKNPLGTVLAVDPDAAKRKIRYTLRRSSPSGDYVKVSNSGD
IFISKPLDREASAWHNLTVAAQEIMADNRLSDIESHTQVYIQVLDQNDNAPEFAYPYEPK
VCENAAPGKVIIRISATDKDEMLPGVNFKYSLTTEDSNFTLVDNHENTANVTVKYGQFNR
ERAKIHYLPVIISDSGTPELSSTNTLSISVCKCDEKGEFTFCEEAAKQVGVSIQALVAIF
ICILTILVITLLIILRKRHKKELTVLRKNVAEIHEQLVTYDEEGGGEMDTTSYDVSVLNS
VRKNGMNLETRPCLYAQVQKPTGNGNSGTGEMAIMIEVKKDEADNDGDLLPYDTLHIYGY
EGAESIAESLSSLESGSSDSDIDYDFLNDWGPRFKMLAELYGLEPNEDFVY
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgcttattctccttttctccctgatcttggctccagcctccgcttacacagaa
gatttcaagacaaaactaattctttcaccaaacagtcataaacgatttaaaagagaatgg
atctggaatcaaatgcatatcatggaagagattaattcaccattaccacatcatgttgga
aagatcacatcaagtgcaaggaagaagaatgctatgtatgttcttgagggggaatatgcc
aacagcatctttaaagtccgtgaagacactggagatgtgtatgcatttgagaggctggac
cgagaaaagaaatcagagtataatctgacagctcactgtattgacagaacaaccaacaag
gcactggagccaccatccacatttatcatcaaagtctacgatgttaatgataatgttcct
gtgtttgtacaaaaagcattcaatggttctgtcccagaaatgtcaccagtaggaacttca
gtcaccaaagtgacagcagtggatgctgatgacccaacagttgcaggtcatgccacagtt
atataccaagttattcaaggagagcgctatttcacagttgatgaatctggagtgatttct
acagccacagctgatttagacagagagactcagtctacatacgaaattgttgttaaagca
aaagattctccagggcttcacggtggggattcaagcactgctacagtcatcattacttta
tctgacatcaatgacaacttcccaacatttaaacagcaatcgttccactttaaagtccct
gaaaacattagagtaggaagtgaagtcggcagattgaaagtagaagacattgatgagcca
caaaacagaaacacgaagtataattttgtcagaggacactatagagatacctttgaaatt
ataccaaatgcattcaccaacgaaggaataattaagccaaagaagccattggactatgaa
aaaataaaagagtacaagtttgacattgaagcaactgatccaacagttaatatgcgtttc
ttcaagtctggtgggccaaagagcattgcagccattaccattgaaattcttgatgttgac
gagcctcccatcttctctcagccatcctatgtttataaaataaaagaaaactacctccca
aaaaacccacttggcacagttttggcagtagatcctgatgcagcaaaacggaaaattaga
tataccctccgaagatccagccctagtggggactatgtcaaagtatccaatagtggagat
atcttcatctcaaaacctctggacagagaagccagtgcctggcataacctaaccgtggca
gcccaagaaatcatggcagacaatagactgtctgacatagaatcacatacacaagtttat
atccaggttcttgatcaaaatgacaatgctccagaatttgcttatccttatgagcccaaa
gtgtgtgaaaatgctgcaccgggaaaggtaataatcaggatttcagctactgacaaggat
gaaatgttgcctggcgttaacttcaaatattccctgaccacagaagatagcaacttcaca
ttggttgacaatcacgagaacacagctaatgtcaccgtcaaatatggacagtttaaccgt
gagcgggcaaaaatccactacctacctgtcatcatctcagacagtggcacacctgagcta
agcagcacaaacacactttccatcagtgtctgcaagtgtgatgagaaaggagaattcact
ttttgcgaagaagcagctaagcaagttggagttagcattcaggcgttggtggcaattttt
atctgcatcctcacaatccttgtaatcacattgttaatcattctgagaaagaggcacaag
aaagagctgactgtacttaggaagaatgtggcagagattcatgagcagcttgtcacctac
gatgaagaaggtggtggtgaaatggacaccaccagctacgatgtgtctgtgctcaactct
gtccgcaagaatggcatgaacctggagactaggccctgcctgtatgcacaggtccagaag
ccaacaggaaatggaaattctggcactggggaaatggcaattatgattgaggtgaagaag
gatgaagctgacaatgatggggatttgctgccatatgacacccttcacatttatggctat
gaaggtgctgagtccattgcagaatctcttagctctttggagtcaggatcctcagattca
gatattgactatgactttctaaatgactggggtccaagatttaaaatgttagctgagctt
tatggattggagccaaatgaagactttgtgtattaa
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