Chelonia mydas (green sea turtle): 102934197 Help Entry 102934197         CDS       T02989                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism cmy  Chelonia mydas (green sea turtle) Pathway cmy04382   Cornified envelope formation cmy04510   Focal adhesion cmy04512   ECM-receptor interaction cmy04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cmy00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102934197 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     102934197 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     102934197 (COL4A1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     102934197 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cmy04147]     102934197 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:cmy00536]     102934197 (COL4A1) Exosome [BR:cmy04147]  Exosomal proteins   Exosomal proteins of other cancer cells    102934197 (COL4A1) Glycosaminoglycan binding proteins [BR:cmy00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102934197 (COL4A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  102934197 NCBI-ProteinID:  XP_037752725 LinkDB All DBs Position 1:complement(106208125..106417380) Genome browser AA seq 1674 aa AA seqDB search MRLWRGVGLLLAALLLSQEPDEASAAACSGCGKCDCSGVKGQKGERGLPGLQGVIGFPGM QGPEGPPGPPGIKGDTGEPGLPGTKGTRGPPGSSGYPGNPGLPGIPGQDGPPGPPGIPGC NGTKGEIGPVGPPGLPGLDGRIGPPGPPGIKGDPGEVIGFLPQNVLKGERGYPGLPGQPG TPGLPGLQGPIGPPGITGVPGPPGPPGLPGEKGHMGLSFQGPKGDKGERGVGGPPGPQGT ASQRKEKGSVIIYGEKGEPGEKGDNGSRGFPGSSIKGEKGEPGKAGPRGKPGKDGERGPK GQPGEDGRFGVPGLPGDPGPKGDKGAQGLPGLPGRVIGTGTVDAYGEKGDIGPPGFPGLK GEQGLKGLPGVQGRPGPPGLPSPEITGPPGFPGERGEKGDQGPPGLSLHGSTGRDGFPGP PGPPGPPGLPGITNGIMECQPGEPGDRGLPGPQGQPGFLGERGDKGDKGDGCALCDVSGL PGHPGPQGPPGPPGFPGQPGAKGDRGMPGLTGLEGVPGSPGVPGLIGSPGAKGEPGDIYF DSNLKGDKGDPGFPGQPGVPGREGRPGRDGLPGLQGPKGASGTIGLKGERGPPGSSGFPG VRGERGQPGLPGVGPAGPAGDKGDKGFPGNPGVPGRPGPKGEAGQVIPLPGPPGSDGLPG PPGFSGVQGDRGDPGFPGKPGLPGEKGAVGQPGIGFPGPPGPKGFPGQPGTTGQPGAQGR PGFDGLPGTPGLPGQKGDPGVGLPGPKGLPGLQGPAGFPGEKGNAGLPGLRGEQGFPGVP GQPGIQGDPGSAGLPGSQGAPGVPGIGPLGPPGPAGEPGPQGPTGLPGTKGERGYPGLPG LDMPGPKGDKGSPGQSGLPGLVGLPGVPGQQGKGGLSGFPGIKGEMGVMGTPGIPGSPGP LGNPGLQGEKGTPGFPGTSGPRGDPGFKGSKGEVGLPGEPGTIKITDMENMKGQKGDPGE KGQEGTIGEKGKTGDYGVPGMPGKDGERGFPGLPGRKGDQGPPGYPGDPGFRGQKGSIGE MGLPGTPGEKGVPGVPGSQGMPGYPGLQGEKGDKGESGVPGIGIPGAPGEKGEQGRSGVP GFPGEKGEKGSTGIPGMPGHPGPKGLPGIAGYPGSPGSHGEKGEKGLSGLGGIPGLKGEA GEPGSEGPSGVPGQKGEQGYDGIPGSPGPKGDPGIPGRGLPGFPGAKGDKGAKGDVGFPG SPGSPGIPGSKGEAGFVGPQGLPGQQGIPGLPGRAMEGPKGDRGPPGQPGLSGLPGPEGP PGSPGLEGAKGEKGNTGWPGTPGRLGIKGDLGFQGIPGSAGLPGGIGQKGDMGPPGVPGF QGPKGSSGFPGLKGEQGDQGFPGSKGLQGPPGPPGPYQLLKGEPGLPGPVGPVGLKGLPG LPGPKGQQGVTGPEGIPGQPGVPGFDGQPGQKGEPGPSGPPGPRGARGPPGPEGLPGSMG PPGTPSVAHGFLVTRHSQTIEEPECPPGTKLMYYGYSLLYVQGNERAHGQDLGTAGSCLR KFSTMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDNIRPFISRCSVCEAPA MVIAVHSQTVQIPLCPEGWMSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIE CHGRGTCNYYANAYSFWLATIERNEMFKKPTPSTLKAGDLRSNVSRCQVCMRRT NT seq 5025 nt NT seq  +upstreamnt  +downstreamnt atgaggctgtggcgaggcgtggggctgctgctggccgcgctgctgctcagccaggagccc gacgaggcgtccgcggcggcttgttctggctgtggaaaatgtgactgcagtggagtaaaa gggcaaaaaggtgaaagaggtttgcctggcctacaaggtgtaattgggtttcctggaatg caaggacccgaaggtccacctgggccaccaggaattaagggtgatactggagaaccaggg ctaccaggaacaaaaggaacaaggggcccaccaggttcatcaggatatccaggaaaccca ggtcttcctggcatccctggacaagatggcccaccaggtccacctggtatcccaggttgc aatggcacaaagggtgaaataggccctgttggtcctccaggtttacctggattggatggg agaataggacctccaggacctcctggaattaagggagacccaggtgaagtgattgggttc ttaccacaaaatgtcctaaaaggtgaaagaggttatcctggcctgcctggacaaccaggt acaccaggattgccagggctccaaggccccatcgggccaccagggattacaggagttcca ggtcccccaggcccaccgggacttccgggtgagaagggtcatatgggcttgagttttcaa ggaccaaaaggtgataagggtgaacgaggagtcgggggccctccaggtccacaaggaact gcctcacagcgcaaagagaaagggagtgtaatcatatatggagagaagggtgaaccaggt gaaaaaggtgataatgggagtcgaggatttccaggctcaagcatcaaaggggaaaaaggt gaacctgggaaagctggcccacgaggaaaacctggaaaagatggcgagagaggaccaaaa ggacaacctggtgaggatggtaggtttggcgttccaggactaccaggtgaccctggtcct aagggagacaagggcgcacaaggtcttccaggacttccaggaagagtaataggtactgga acagtggatgcttatggtgaaaaaggagacattggtcctccaggttttccgggattaaaa ggtgaacaaggtctaaaaggtttaccaggtgtacaaggacgcccaggtcctccaggttta cctagcccagagatcacaggtccacctggcttccctggtgagagaggtgaaaagggtgac caaggtcctccaggactctctctgcatggatcaactggaagggatggttttccagggcct ccaggtcctccaggacctccaggacttccaggcataacaaacggaatcatggaatgtcag cctggagaacctggtgatcgaggtcttcctggaccccaaggacaacctggattcttagga gagagaggagataaaggtgataaaggtgatggttgtgccttgtgtgatgtatctgggctt cctggacatcccgggccacaagggccaccgggtccaccaggctttccaggacagccagga gccaaaggagataggggtatgcctggactcactggtcttgaaggggttcctggttctcca ggtgtgccaggactgattggtagcccaggagcaaagggagagcccggagacatttacttt gattctaatctaaaaggtgataaaggagatcctggattcccagggcaaccaggtgttcct ggaagagaaggaaggccagggagagatggcctgccaggtctccagggccctaaaggagca tcgggtacaattgggctgaaaggagaacgtggtccccctggctcaagtggatttcctggg gtacgtggtgaaagaggtcagcctggtcttccaggggtaggacctgctgggccagctggt gacaaaggagataaaggctttccaggaaacccaggtgtaccaggccgcccagggccaaag ggtgaagcaggacaagtcattcctctgcctggtcccccagggtcagatggtctcccaggg ccacctggcttctctggagtccaaggtgacaggggggatcctgggtttccaggaaaacct ggacttccaggagaaaaaggtgctgttgggcagccaggaataggattccctgggcctcct ggccctaaaggtttcccaggtcagcctggcacaacaggtcagccaggggctcaagggcgt cctggctttgatggtttaccaggcacaccgggtttacctggtcaaaaaggtgaccctgga gtgggcctcccaggtcctaaaggattaccagggctacagggtccagcaggcttccctgga gaaaaaggaaatgctggtttgcctggcttacgaggagagcaaggatttccaggtgtacct ggtcagccaggaatccaaggtgacccaggttcagctggattaccaggttcacaaggtgcc ccaggtgtgccaggaataggccctctggggccccctggacctgcaggagaaccagggcca cagggaccaacaggacttcctggaacaaagggagagaggggctacccaggtctcccagga ctagatatgccaggaccaaaaggagataagggtagccctggtcagagtgggctaccaggt ctggtaggtttacctggcgtacctggtcaacaaggaaaaggtggactttcaggctttcca ggcatcaaaggagaaatgggagttatgggaacccctggaatcccaggttctcccgggcca ctaggaaatccaggattacagggtgaaaaaggtactccaggttttccgggtacatcaggg ccacgaggtgatcctggtttcaaagggagtaaaggtgaagtaggtctaccaggagaacca ggaaccataaagataacagacatggaaaatatgaaaggccaaaagggagacccaggagaa aaaggacaagaaggaacaataggagaaaaggggaaaacaggggattatggtgtaccagga atgccagggaaggatggtgaacgtggcttcccgggacttccaggacgaaaaggtgatcaa ggccctccaggatacccaggtgacccaggatttcgaggacaaaaagggtcaattggagaa atgggtttgccaggaacacctggagaaaaaggtgtgccaggtgtgccaggctcacaaggt atgccaggataccctggattacaaggtgaaaaaggagacaaaggagagtcgggtgttcca gggattggcattccaggtgctccgggtgagaagggagaacaaggaaggtcaggtgttcca ggcttccctggtgaaaaaggtgaaaagggtagcacaggaattccaggaatgcctggtcat ccaggtcccaaaggattacctggcattgcaggatatccaggcagcccaggtagccacgga gaaaagggtgaaaaaggactctctggcttgggtggtattccaggtttaaaaggagaagca ggtgaacctggttctgaaggtccctctggtgtccctggacagaaaggtgaacaaggttat gatggaataccaggttcgcctggaccaaagggtgacccaggtattccaggtagagggctt ccaggatttcctggtgcaaagggagataaaggtgcaaaaggtgatgtgggttttccagga tccccaggaagcccggggattcctggttcaaaaggagaagcaggatttgttggtccgcaa ggtcttccaggccaacagggcattcccggattaccagggagagcaatggaaggtcctaaa ggagacagaggacccccaggtcaacctggactttcaggtctaccaggtccagagggacca ccaggatctccaggccttgaaggagccaaaggagaaaaaggaaacacgggttggcctgga acacctggaagacttggaatcaaaggtgatctgggattccaaggcattcctggtagtgct ggtttaccaggaggtattggtcaaaagggtgatatgggacctccaggagttcccgggttt caaggtccaaaagggtcttctggcttcccaggtctcaagggagaacaaggtgaccaaggg tttcctggctctaaaggtttacaaggtccaccaggtcctccaggtccttatcagcttctt aaaggggaaccaggtttacctggccctgtcggaccagttggtctaaaagggctccctgga cttccaggtccaaaaggacagcaaggagtaacaggacctgagggtatacctgggcaacct ggtgttccaggatttgatggtcaacctggtcagaaaggagaacctggtccttctggtccc ccaggtccgcgaggagccagaggtccaccaggccctgaaggtttaccagggtcaatgggc ccaccaggcacaccatctgtcgctcatggcttccttgttaccagacacagccaaaccatt gaagaaccagaatgtccacctggaactaaactgatgtactacggctactccttactttac gtacaaggcaatgaaagggcacatggtcaggatttgggcacagcagggagctgtcttcgt aaatttagcactatgccattcttgttctgcaacatcaataatgtatgcaactttgcatca aggaatgactattcttactggctgtctactcctgaacccatgccaatgagtatggctcct atcactggtgacaatatcaggccattcatcagtagatgctctgtgtgtgaggctcctgcc atggtaattgcagttcacagccaaacagttcaaataccattgtgccctgaaggctggatg tcgctttggattggttactcctttgtaatgcataccagcgctggtgctgagggttccgga caagctctggcatctccaggttcctgtctggaggagttccgcagtgctcccttcatagaa tgccatggtcgtggaacttgtaactattatgcaaatgcttacagcttttggcttgccact atagagagaaatgagatgttcaagaaacctactccttcaactctgaaagcaggggacttg cgctcaaacgttagccgttgtcaagtctgtatgagaagaacataa

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