Chelonia mydas (green sea turtle): 102934356
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Entry
102934356 CDS
T02989
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03013
Nucleocytoplasmic transport
cmy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102934356
03015 mRNA surveillance pathway
102934356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102934356
Enzymes [BR:
cmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102934356
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102934356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
102934356
NCBI-ProteinID:
XP_037737065
LinkDB
All DBs
Position
18:complement(8748732..8772906)
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AA seq
479 aa
AA seq
DB search
MATDSWALAVDEQEAAAESLSNLHLKEEKTKPDSNGAVVKTENNAEKTEDEEKEDRAAQS
LLNKLIRSNLVDTTNQVEVLQRDPTSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQTGK
VIEQMGKFHPELRLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCNNRDEKFHALCNIYGAITIAQAMIFCHTRKTAGWLAGELSKEGHQV
ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIEKLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcctgggctctggcggtggacgagcaggaagcggccgccgagtcgttg
agcaacttgcacctgaaggaggagaaaacgaagccagactccaatggtgctgttgtcaag
acggagaacaatgcagagaagacggaagatgaggaaaaagaggacagagctgcccaatcc
ttgttaaacaagctgattcgcagtaatctggtggacacaacaaaccaagtggaggtgctg
cagagggatcctacatcacctctctactctgtgaagtcttttgaggagctgagactgaaa
ccccagctcctgcagggtgtctatgccatgggcttcaaccgaccgtcgaaaatacaggag
aatgctctgcccatgatgcttgccgaacccccacagaacctgattgcacagtctcagtct
ggtactggtaagacagctgccttcgtcttggccatgctcagtcgagttgaacccgggaac
aagtatccacagtgtttgtgcctttccccaacatatgagctggcacttcaaacaggaaaa
gtaattgaacagatgggaaagtttcatccggagctaagacttgcatatgctgtccgaggc
aataaattggagagaggtcagaagatctctgagcagattgtaattggcactcctggtact
gtcctggactggtgctccaaactgaaattcatagaccccaagaagattaaagtgtttgtc
ctggatgaggctgacgtgatgatagcaactcagggccaccaagatcagagcatccgcatt
cagagaatgctccccagagattgtcagatgctcctattttctgccacctttgaagattct
gtatggaaatttgcccaaaaagttgttcccgaccccaacatcatcaaactgaagcgagag
gaggagacactggacaccattaagcaatactatgttctatgtaataatcgagatgagaag
ttccatgctctctgtaatatatatggagccatcaccatcgcccaggccatgatcttctgt
catactcgtaaaacagcaggctggctggcaggagagctgtcaaaagaaggtcaccaggtt
gcactgctaagtggcgagatgatggtggaacaaagagctgcggtgattgagcgtttcaga
gagggcaaagagaaagtgctggtgaccacaaatgtctgtgccagagggattgatgtagag
caggtctctgttgttatcaactttgaccttcctgtggataaagatggcaacccagataat
gagacttatctgcatcggattgggcgtacgggtcgttttggcaagcgaggactggctgtt
aacatggtagacagcaagcacagcatgaatattctgaacagaattcaggaacatttcaac
aaaaagatagaaaaactggatactgacgacttggatgaaattgagaaaatagccaactga
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