Chelonia mydas (green sea turtle): 102934576
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Entry
102934576 CDS
T02989
Symbol
TRA2A
Name
(RefSeq) transformer-2 protein homolog alpha isoform X1
KO
K12897
transformer-2 protein
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102934576 (TRA2A)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmy01009
]
102934576 (TRA2A)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmy03041
]
102934576 (TRA2A)
Protein phosphatases and associated proteins [BR:
cmy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102934576 (TRA2A)
Spliceosome [BR:
cmy03041
]
Common components
Common spliceosomal components
SR proteins
102934576 (TRA2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
102934576
NCBI-ProteinID:
XP_007066233
LinkDB
All DBs
Position
2:202567786..202621788
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AA seq
383 aa
AA seq
DB search
MGTVSLPGPLSDASVRAGGRPRRGLTSITSSSPPAAGASFVIGGAAPPPCAVSGAEEAEA
PFCAAAAACRTGPEALRGGRQEGGRCPGLASPFAERSNQHPAAMSDVEENNFEGRESRSQ
SKSPAGSPARVKSESRSGSRSPSRASKHSESHSRSRSKSRSRSRRHSHRRYTRSRSHSHS
HSHRRRSRSRSYTPEYRRRRSRSHSPMSNRRRHTGSRANPDPNTCLGVFGLSLYTTERDL
REVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMEHANGMELDGRRIRVDYS
ITKRAHTPTPGIYMGRPTHSGGGGGGGGGGAGRRRDSYYDRGYDRGYDRYEEYDYRYRRR
SPSPYYSRYRSRSRSRSYSPRRY
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggggacagtgtctctccccggtccactttccgacgcctcagtgcgggccggcggaagg
ccaaggcggggtctcacttcaatcacctcctcatccccgcccgcagcgggcgcctccttt
gtgattggcggggcggccccgcccccctgcgcggtgtcgggcgcagaggaggcagaggcg
ccattttgcgctgccgccgctgcctgcaggacgggtccggaggctctgcggggagggagg
caggaaggaggccgctgcccgggactcgcgtccccgttcgctgagcgcagcaatcagcac
cccgccgccatgagcgacgtagaggagaataacttcgaggggagggagtctcgctcccag
tcaaaatctccagctgggagtcctgctcgtgtaaaatcggagagcaggtcaggatctcgt
agtccatcgagggcttccaaacattctgaatcgcactcccggtcaaggtcaaaatccagg
tccagatcgagaagacattcgcacagacgttacactcgctccaggtcccattctcattct
cattcgcataggagacgatctcgaagcagatcgtacacacccgaatatcgtcgccgaagg
agccgcagtcattctccaatgtctaaccgaagaaggcacactggcagcagagctaatcca
gatcctaacacatgccttggagtgtttggtctcagtttgtataccactgagcgagacttg
cgtgaagtcttttcccgttacggacctttgagtggcgtcaatgtggtttatgatcagcgg
actggacgatcaagaggattcgcttttgtttattttgagagaatagacgattctaaagag
gcgatggaacatgcaaatggcatggagctggacggcaggaggattcgcgtggattactcc
atcaccaagagagcgcacacccccaccccgggcatctacatgggcaggccaacccacagc
ggaggtggcggcggcggtggtggtggaggagcaggtcgtcgtcgtgattcctattacgac
aggggatatgatagaggatatgacagatatgaagaatatgactaccggtacaggagacga
tcaccttcaccttattatagccgataccgatcacggtcaagatcccgctcctatagccca
agacgctactga
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