Chelonia mydas (green sea turtle): 102934731
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Entry
102934731 CDS
T02989
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmy03016
]
102934731 (TARBP1)
03036 Chromosome and associated proteins [BR:
cmy03036
]
102934731 (TARBP1)
Enzymes [BR:
cmy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
102934731 (TARBP1)
Transfer RNA biogenesis [BR:
cmy03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
102934731 (TARBP1)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102934731 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
102934731
NCBI-ProteinID:
XP_007068922
LinkDB
All DBs
Position
3:complement(129495590..129593386)
Genome browser
AA seq
1605 aa
AA seq
DB search
MELVLADALLGLARSPDPCALLRAVCGGDGPAPLSVERVETLRFLLQWLEAGGAGGEALR
RAAGEVALGRCWPLLRGGGGGADDPERRRLVRAACGALRLCARLGGAPLAARLAGEALAA
LRAEPPGAGLGAEAAVEALVAVAPELQEPALLERAVDAALALVRAGGRDAGEEVAAALVA
GRLLPALSRNRAALGRVWEGLLLPPGRGAEGGAAALRVSRTLLALTALADLLFPGLEGDG
GGEGPARDARLCGGFWRVVQKGLTDGDGLCRKRARYLLKRAVEVSDQLRTDCTCPPDSGD
EPSLFWWSVEKNDKLLQFWENYILIMETLEGNQIHVIKPVLPKLNSLYEYAVSEKGCWLF
HPSWHMCIYKRMFESENKTLTREGVAQFLELYETKRLPNSPGFSEFIIGPLMDALSESSL
YGRSPGQLIGACPPLGMKLQKFLSTYLTLLPEEEKSSFLLKFIQKMTSRHWCAVPILFLS
MALACIPSYKALGTDGLHALRDVLQCTMITHQILLRGAAQCFLLQTAMHLTDVEKVSLPE
ISSFLMSLRQEESLSRGTILWMELCDWLYTHDRCFRKSINCHVEHQERSSLSAYVRTLVE
DYLKAPASKRENCFMPDWFEAKLVATMILLAADVEEVKNKHSKKSNTERVELKSFLHPLL
DVLLKLGTNAYIPTLKTDKSLQLLLRLLQTCLLKQSSPQDDVVLSFLSNSVMTAAESVLE
FVLRRLTTSELNTVSDLDRCNLYLALLSDLVNLCSKAGWKKGPSIWNFISSLINASIRNL
QETGNEQEPKLGEQIQKVVSMASLTVVCEIIDRKPELQLKSLHAVETLKGFISSVQLNQV
LKKPSYIEEKNSLFEESTSSQGWGKIVASYVHDQWVCLHFILNKYHKFIPLSNDETLELS
LLAVQRPIRTLQSALEALTLLPSDQVLPVFHCMKVLVPKLLGSSESLCIDAFDMAWKVMS
SLSNTQLIFWSNLKAFVWFVFDTEVLAVAASSKGQAYSKIKEIILKLVEMSTARTGVFNI
VLSYCCQSWLFPTSDDTGALENPFSNAGNYSELITEACVFGTVFRRDQRLIQDVHAFVEN
LGDECAANVVTESTNRDDHYVRVCAVKFLCLLDGSNTLHKMFMEDLVIKLLDKDELVSKS
RTRYYVNSLQHRIKNRLWQTLLVIFPKLDQNFLTGTLDKIFQAGFGNNQASIKYLIEWII
ILILNKYPQFLEKFWNCFCYGEEKLKTSICTFLSVLSHFDIILENASEKKPILKKALLVV
LQWCFNHNFSVRLYALVALKKIWGMCKALCVEEFEALTPVIESSLHQVENMHGTGNAGKN
WQRIQDHFFFATFHPLKDYSLETIFYTLPRLSELVEDEWIPLCKFTRYTDISLPAAFHWL
HSRTELLNLKPSDWSQQDMGSDLVETDNQPEWTDVQKKIIPWKNSSPDLDLELVFQDRAA
KLGKSNSRLIVVASLIDKPTNLGGLCRTSEIFGASALVVGSLHYINDKQFQHLSVSAEQW
LPLVEVKPSQLVNYLQQKKTEGYTIIGVEQTAKSSDLTEYCFPEKSLLLLGNEHEGIPAN
LIQHLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQLIKQKQQK
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atggagctggtgctggcggacgcgctgctgggcctcgcgcgcagcccggacccctgcgcg
ctgctgcgggcggtgtgcggcggcgatgggcccgccccgctctccgtggagcgcgtggag
accctccgcttcctgctgcagtggctggaggccggcggggccgggggggaggcgctgcgg
cgggcggccggggaggtggcgctggggcgctgctggcccctgctgcgcggcggcggcggg
ggagcggacgacccggagcggcgccgcctggtgagagccgcctgcggggcgctgcggctc
tgcgcccggctcggcggggccccgctggcagcgcggctggccggggaggcgctggcggcg
ctgcgggccgagccgccgggggccgggctgggcgccgaggcggcggtggaggcgctggtg
gccgtggcccccgagctgcaggagccggccctgctggagcgggcggtggacgcggcgctg
gcgctggtgcgggcgggcgggcgcgacgccggggaggaggtggcggcagcgctggtggcc
gggcggctgctgccggcgctgagcaggaaccgcgccgccctggggcgggtctgggagggg
ctgctgctgccgccgggccgcggggcggaggggggcgctgccgccctccgggtgagccgg
accctgctggccctgaccgccctggcggacctgctgttccctggcctggagggggatggt
ggcggggagggcccggctcgggacgcccggctctgcgggggcttctggcgagtggtgcag
aagggactcaccgacggggacgggctgtgccggaaacgagcccgctacctgctgaagcga
gcggtggaggtgtccgatcagctgcgcacggactgcacctgccccccggacagtggagac
gaaccaagtcttttctggtggtctgtggagaagaatgacaaacttttgcaattttgggaa
aattacattttaataatggagactctggaaggaaatcagatacatgttataaagccagtc
ttaccaaagttaaacagtttgtatgaatatgcagtatcagaaaaaggttgttggttgttt
cacccatcatggcatatgtgcatttacaaaaggatgtttgagagtgaaaacaaaactttg
acgagggaaggtgttgctcaatttctggagctttatgaaacaaaacgccttccaaattca
ccaggattttcagagtttattatcggaccgttaatggatgcactttcagaaagttctctc
tatggcaggtcaccaggccagttgataggagcttgtcctcctttagggatgaagttacag
aagtttttgtctacttacctcacacttcttccagaagaagaaaaaagtagtttcctgtta
aagtttattcagaagatgacaagtaggcactggtgtgctgttcccattttgtttctgtct
atggcactggcatgtatcccatcatataaagcactgggtacagacggacttcatgctcta
agagatgtcctgcagtgcactatgatcacacatcaaattttgttgcggggagctgctcag
tgttttcttcttcaaacagctatgcatttgacagatgtggagaaagtgtcacttccagag
atttcaagttttctcatgtctcttagacaagaggagtccttaagcagagggactatacta
tggatggagctttgcgattggctgtatactcatgacagatgcttcagaaagtccataaac
tgccatgttgagcatcaagaaagatcttcattaagtgcatatgtacgtactcttgtggaa
gattaccttaaggcacctgcatccaaaagagaaaactgctttatgcctgactggtttgaa
gctaagcttgttgctacaatgattctgctggctgcagatgtggaggaggtgaagaataaa
cacagcaaaaaaagcaacactgaacgggttgaactaaagtctttcttgcaccctcttctg
gatgtcttgttgaaacttggcactaatgcttacataccaacactgaaaaccgataaaagt
ctacagctactgttgaggctattacagacctgtttgttaaaacagtccagtccacaagat
gatgtggtgttaagttttctctctaattctgttatgactgctgcagaaagtgttctggaa
tttgtcctcagaagactcactacaagtgagttgaatactgtttcagatctggatcgttgt
aatttatacttagcattattgtcagacctggtgaatttatgctcaaaagctggctggaaa
aaggggccctccatttggaatttcatctcttctctgataaatgcctctattcgaaatctc
caggagacgggcaatgaacaggaaccaaagcttggagaacagattcaaaaagtagttagt
atggcctcactaactgtggtttgtgagattattgatcggaaacctgaactgcaacttaaa
tctctacacgctgttgaaaccctaaaaggttttatttcctctgttcaacttaatcaagta
ttaaagaagccttcttatattgaggaaaaaaatagtttatttgaagaatcaacatcttct
caaggatgggggaaaatcgttgcaagctatgtacatgaccagtgggtttgccttcatttt
attttaaataagtatcataaatttataccattgtcaaatgatgagactctggaactatct
ttgcttgcagtccaaaggccaataagaactctacagtctgcactggaagctctaactctt
ttgccttctgaccaggttttacctgtgtttcattgcatgaaagtgcttgttcccaagctt
ctgggctcatccgaatctctctgcatagatgcatttgatatggcttggaaagttatgtcc
tctttgagcaacacacagctaatattttggtctaatttaaaagcctttgtttggtttgtt
tttgacactgaagttcttgctgttgctgcaagtagcaagggtcaagcatattcaaaaata
aaggagatcatactcaaactagttgaaatgtccactgcaagaactggagtctttaatata
gtgcttagttattgctgtcagtcgtggttatttcctacatctgatgacacaggtgcttta
gagaatcccttctcaaatgctggaaattacagtgaacttatcacagaggcctgtgtcttt
ggaactgtatttaggcgagatcaaagactcattcaggatgtccatgcctttgtagaaaat
cttggagatgaatgtgcagccaatgttgtcacagaaagtacaaacagagatgaccattat
gtgcgagtttgtgccgtcaaattcctatgcttgctggatggatcaaatactttgcacaag
atgtttatggaagaccttgtcatcaaactacttgataaagatgaattggtgtccaaatct
agaacacgctactatgtgaactctttacaacacagaattaaaaatcggttgtggcaaacg
ctgctagttatttttccaaaacttgatcagaattttttgactgggactcttgacaagatt
tttcaggctggatttggtaacaatcaagcatccataaaatacttaatagaatggattatc
atcttgattctaaacaaatacccccagtttcttgaaaaattctggaattgtttctgctat
ggtgaagaaaagcttaaaactagcatctgtacatttttatccgtgttgtctcactttgac
attattcttgaaaatgcctctgagaagaaaccaattttgaagaaagcccttcttgttgtt
ctacagtggtgttttaaccacaatttcagtgttcgactttatgcattagtagctctcaag
aaaatctggggcatgtgcaaagcattgtgtgtggaagaatttgaagctttgacaccagtt
attgaatcgagtcttcatcaagtggaaaacatgcatggtacagggaatgctggaaagaat
tggcaacgaatccaagatcatttcttttttgcaacatttcatcccctgaaggattacagt
ctagagacaatattttacacccttccacgcctttcagaacttgttgaagatgaatggatc
ccactctgtaaatttaccagatatactgacatttctttgcctgcagcatttcattggttg
cattctcgaactgaacttcttaatctaaaaccaagtgactggtctcagcaagatatgggt
tcagatttagttgaaacggataaccaaccagaatggacagatgttcagaaaaagatcatc
ccttggaaaaacagtagtcctgatttagacctggaattggtatttcaggaccgtgcagct
aaacttggtaaatccaacagtagattgattgtagtggcctcacttattgataaacccacc
aatttaggaggtttgtgtcgtacaagtgaaatatttggggcatctgctttagttgttggc
agtcttcattatataaacgataagcaatttcaacatctcagtgtttctgcagaacagtgg
cttcctcttgtcgaggtgaaaccatctcagcttgttaattatttacagcagaagaaaact
gaaggctacactatcataggtgtggagcaaactgctaaaagttctgacttgaccgaatac
tgctttccagagaaatccttgttattgctgggaaatgaacatgagggaatcccagcaaac
ctgattcagcatctggatgtttgtgtggaaattcctcagcagggtatcattcgatcactg
aatgttcatgtaagtggagctctgctgatttgggagtatacaaggcaacaactaatcaag
caaaaacaacagaaataa
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