Chelonia mydas (green sea turtle): 102934777
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Entry
102934777 CDS
T02989
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X2
KO
K08524
retinoid X receptor alpha
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03320
PPAR signaling pathway
cmy04148
Efferocytosis
cmy04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102934777 (RXRA)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
102934777 (RXRA)
03320 PPAR signaling pathway
102934777 (RXRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmy03000
]
102934777 (RXRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cmy03310
]
102934777 (RXRA)
Transcription factors [BR:
cmy03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
102934777 (RXRA)
Nuclear receptors [BR:
cmy03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
102934777 (RXRA)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
102934777
NCBI-ProteinID:
XP_007061070
UniProt:
M7C2J0
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All DBs
Position
16:17456931..17683655
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AA seq
467 aa
AA seq
DB search
MDTKHFLPLDFSTQVNSTSLNSPTGRGPMAAPSLHPSIGPGIGSSLGSPGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPSTPSLGFGTGSPQLNSPMNPISSTEDIKPPLGLNG
VLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKI
LEAELAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVS
KMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPDQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaacatttcctgccactggatttttctactcaagtcaattccacgtccctg
aactctccaactggccgggggcctatggccgcaccttccctccatccatccatcgggcca
ggcattggctcctcgctgggctctccgggtcagctccattcgcccatcagcactctgagc
tcccccatcaatggcatgggccctcctttctctgtcatcagctcccccatggggcctcac
tcaatgtctgtcccttcgactcccagccttggattcggaaccggcagcccacagctcaat
tctccgatgaaccccatcagcagcacagaagatattaaaccacccttgggactcaatgga
gttcttaaagtgccagcgcacccctcaggaaccatggcctccttcaccaagcacatatgt
gccatctgtggggacagatcttcaggtaaacattatggggtgtacagctgcgagggctgc
aaaggcttcttcaagcgcacagtgcggaaggacctcacctacacctgccgcgacaataag
gattgcttgattgacaagcgccagcggaaccggtgccagtactgccggtatcagaagtgt
ctggctatgggcatgaagcgagaagctgtgcaggaggagaggcagcgagggaaggaccga
aatgagaatgaggtggagtcaacaagtagcgccaatgaggacatgcccgtggagaagatc
ctggaagctgaactcgcagtggagccaaagacagagacgtacattgaggcaaatatgggc
ttgactcctagctcgcccaatgacccggtaaccaacatatgccaagcggcagataaacag
ctcttcaccttggtggaatgggcaaagagaattccccatttttcagaactgccgttggat
gaccaggtcatcttactcagagcaggctggaatgagcttctaatcgcctccttctcccac
cgttccatagctgtgaaagacgggattctcctggccactggcctccatgtgcatcggaac
agcgctcacagtgcaggagtcggcgccatctttgatagagtactgacagaactcgtgtca
aaaatgcgagacatgcagatggacaagacggagctgggctgcctgcgagccattgtcctc
ttcaaccctgactcgaaaggactctccaaccccgctgaggtggaggctttgcgtgagaag
gtgtacgcgtcactagaggcatactgcaaacacaaataccccgaccagcctggaaggttt
gcgaaactcttgcttcgcctccccgccctccgatccattggcctgaaatgcctggagcac
ctgttcttcttcaagctaataggagacacgcccatcgacaccttcttgatggagatgctg
gaagcaccccaccaaatgacatag
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