Chelonia mydas (green sea turtle): 102934897
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Entry
102934897 CDS
T02989
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102934897 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmy04121
]
102934897 (TRIP12)
Enzymes [BR:
cmy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102934897 (TRIP12)
Ubiquitin system [BR:
cmy04121
]
Ubiquitin ligases (E3)
HECT type E3
102934897 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
102934897
NCBI-ProteinID:
XP_027673168
LinkDB
All DBs
Position
9:32727408..32880140
Genome browser
AA seq
2066 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDTVGGRSHLGQAKHKAHSPPESKKSISKTPKVQ
SNTTSEQSTGHFSKRGCSSSAIIIPQEDPDKVSTSERQKTGQVPKKDHSRGVKRSASPDY
NRTNSPSSAKKPKALQYTETFSETNKPHTKSKKRPLDQEQQSKSAQLPSTSKAHTRKGGA
TGSSRSQKRKRTESSSCIKSGTAVESTGIEERSAKPSKLASKSATSAKAGCSNITDSSSS
ASTSSSSSAVASVSSTVPQGARVKQGKDQSKARRSRSASSPSPRRSSRDKEPSKTGGSSK
FDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPS
LRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEAPQG
AAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGS
GASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEH
NFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRH
SKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTH
QDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVR
MFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICE
LMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDE
ISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANSNTSGHSELKKDDARAQLMKE
DPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSH
IASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPKA
CTNGSGTLGTTTTISTGTATSASNATADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLP
KRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEPAR
TAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFNSENMDGSNPALNVLQRLCTA
TEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSRDVRL
KRFLHVFFSSPPPEEESLGRLEPVGNAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTG
SSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRG
YGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQF
SLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNKDSVGGKRGRAQTAPTKT
SPRNSKKHDELWHDGVCPSVSNPLEVYLVFTPPENITFEDPSLDVILLLRVLHAISRYWY
YLYENAVCKEIIPTTEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDT
RQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAESVM
QDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGSQEG
TKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWM
LRQETSLTSHDLFNIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLNMNGCS
VEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDGFE
SVFPLSHLQYFYPEELDQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSL
DSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLP
DYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgacacagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagagtaaaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccacgggacacttttctaaaagaggctgtagttcatct
gcaattataataccacaagaagacccagacaaagtcagtacttcagaaaggcaaaaaacg
gggcaggtgcctaagaaagaccattctcgaggagtgaaacgcagtgctagcccagattat
aacaggaccaattcccctagctctgctaaaaaacccaaagcacttcaatatactgaaact
ttctcagaaacaaacaagccacatactaaatctaagaaaagacccttagaccaagaacag
cagtcgaaatctgcacaattgccatcaacgagcaaggctcataccagaaagggtggagct
accggtagctcccgaagtcagaaaaggaaaaggacagagagctcatcttgtataaagagt
ggtacagcagttgaatcaactggcattgaagagaggtctgcaaaacccagcaaactggct
tcaaaatcggcgacctcagccaaagctgggtgtagcaacatcactgattcttcttcttca
gcttctacatcctcctcctcttctgctgttgcctctgtttcttccacagttcctcagggt
gccagagtaaaacaaggaaaagaccagagcaaggcgaggcgttcccgttctgcgtctagt
cccagtcccagaaggagtagtcgagataaagaaccaagtaaaacaggtggctcttcaaag
tttgactgggccgctcgcttcagcccaaaagttagcctgcctaaaacaaaactgtctcta
ccaggctcttcaaagtcagagacatcaaaacctggaccttcaggattacaggctaaacta
gcaagtttaagaaaatctacgaagaagcgcagcgaatcaccacctgcagagctccccagt
ttgcggcggagcacacggcaaaagaccacgggctcctgtgctagcacgagtcggcgaggc
tctggcctgggcaaaagaggagcagctgaagctcgccgacaggaaaaaatggctgatcct
gataacaaccaggatggagttaattcttcagctgcacgtacagatgaggctccacaagga
gcagcagcatctagctctgttgcgggggctgtaggcatgaccacttctggagaaagtgag
tcagatgattctgagatgggaaggctacaagctctgttagaggctaggggtcttcctcct
cacctgtttggccctcttggtcctcggatgtcacagcttttccacaggacaattggaagt
ggagctagttctaaagcccaacagcttcttcaggggctccaagccactgatgaaagtcag
cagctacaggcagtaattgagatgtgtcagttgttggtcatggggaatgaagaaacatta
ggtggatttccagtcaaaagtgttgtaccagctttgataacattgctgcagatggagcac
aactttgatattatgaaccatgcttgtcgagccttaacctacatgatggaagcacttccc
agatcatctgctgtagtggtagatgcaattcctgtctttttggaaaagctgcaagttatt
cagtgtattgatgtggcagagcaggcactgactgccctggagatgttatcacgcagacat
agtaaagctattctgcaggcaggtgggttagcagactgtctgctgtatctggagttcttc
agcataaatgcccagaggaatgcactagctattgctgccaactgctgccagagcatcaca
cctgatgagtttcactttgttgcagattctctgccactgcttacacaaaggctaacccat
caggacaaaaagtcagtagaaagcacttgtctctgttttgcacggctggtggacaacttc
caacatgaggagaatttgcttcagcaggttgcctctaaggatttgctcacaaatattcag
caactcttggtagtgactcctcccatcctgagctcaggaatgttcatcatggtggtgcgc
atgttttccttaatgtgctccaattgtcctacgctagcagttcaacttatgaagcaaaat
attgcagaaacacttcacttccttctttgtggagcctcaaatgggagttgtcaagaacaa
attgatcttgttccacgaagtcctcaagaactttatgagcttacttctcttatatgtgaa
ctgatgccttgcctgcctaaagaaggaatctttgctgttgatactatgctaaagaaagga
aatgcacaaaacacagatggggcaatttggcagtggcgagatgacaggggtctgtggcat
ccctacaacaggattgatagccggataattgaggcagctcatcaggttggggaggatgag
ataagtctgtctaccctgggacgtgtttatactattgacttcaattctatgcagcaaatc
aatgaagacactggaacagcacgtgccattcagagaaaacctaaccccttagccaatagt
aataccagtggacattcagaattaaagaaggatgacgctcgagcacagctaatgaaagag
gacccagaattggctaaatcctttattaaaacattgtttggtgttctttacgaagtgtac
agctcttccgctggacctgctgttagacacaagtgccttagagcaattcttaggataata
tattttgctgacgctgaacttctgaaggatgtactgaaaaatcatgccgtttcaagtcat
attgcctccatgttgtcaagtcaagaccttaagatagtagttggagcccttcagatggca
gagatcttaatgcaaaaattacctgacatttttagtgtttacttcagaagagaaggggtg
atgcatcaagtgaaaaatctagcagaatctgaggctttgctgacgagcccaccaaaagca
tgcactaatggatcaggaactctgggtaccactacaacaataagcactgggacagccacc
tctgccagtaatgcaactgcagatttggggtctcccagcttacaacacagccgggaagac
tctctggatctgagtccacagggccgactaagtgatgttttaaagagaaaacgactgcca
aaacgtgggcccagaaggccaaagtattcacctccaagagatgatgacaaagtagacaat
caagctaaaagccctacaactactcagtctcctaaatcttccttcttggcaagcttgaat
cctaaaacttgggggagattaagcacacagtccaatagcaacaacattgaaccagcacgc
acagcaggagtcagtggtcttgcaagggctgcctcaaaggacaccatatccaacaacaga
gagaaaattaagggttggattaaggaacaagcccataaatttgtggagcgttattttaac
tctgagaacatggatggaagcaatcctgcactaaatgtattacagagactttgcactgca
actgaacaactcaacctccaggtggatggtggagctgagtgccttgtagaaatccgtagc
atagtctctgagtctgatgtctcctcgtttgaaatccagcatagtgggtttgttaaacag
ctgttgctttacttgacatctaaaagtgaaaaagatgctgtaagcagggatgtcagatta
aaaaggttccttcatgtgtttttttcttctccacctcctgaagaagaatctcttggaaga
ttagagccagtaggaaatgcacccttgttggcattagtccacaaaatgaacaactgtctc
agtcagatggagcagtttcctgtcaaagtgcatgattttccaagtggaaatggaacaggg
agcagtttttctctcaacagaggatcccaagctttaaaatttttcaacacacatcaatta
aaatgccagctgcaaagacatccagattgtgctaacgtgaaacagtggaagggtggacct
gtgaagatagatcccctggctttggtgcaagccattgaaagataccttgtagttagagga
tatggaagagtcagagaagatgatgaggacagtgatgatgatggatccgatgaagaaata
gatgaatctttggctgctcagttcttaaattcagggaatgtgaggcacagactgcagttt
tacattggagatcacttgctgccatataatatgactgtgtatcaagcagttagacagttc
agtttacaagctgaagaggagagggaatccacagatgatgaaagcaaccctttgggaaga
gctggaatttggactaagacacacaccatatggtacaaaccagtgcgagaggatgaagat
ggtaacaaggactctgttggtggtaaaagaggaagggcacaaactgctcccacaaaaact
tcccctagaaattcaaaaaagcatgatgagttgtggcatgatggtgtgtgcccttcagtg
tcaaatcctttagaagtttaccttgtatttacaccgcctgaaaatataacatttgaagac
ccctcattagatgttatcctccttttgagagttttacatgctatcagtcgatattggtat
tacctgtatgaaaatgcagtttgcaaggagattattcccaccacggaatttatcaacagt
aaactgacagcaaaagctaacaggcagcttcaggatcctttggtaatcatgacaggaaac
ataccaacttggctgacagagcttggaaaaacatgcccatttttctttccatttgacacc
cggcaaatgctattttatgtaactgcttttgatcgagatcgagcaatgcagagattacta
gataccaatccagaaatcaatcagtcggattctcaggacagcagagtggcgccgcgactg
gacaggaaaaaacgcactgtgaatagagaagagctgttgaaacaggcagaatctgtgatg
caagatctaggcagttcgagagctatgttggaaatccagtatgagaatgaagttggcaca
ggtctaggacctacactggagttttatgcacttgtatctcaggaactacagagagcagac
ttaggcctctggagaggagaagaagtaactctatccaatccaaaaggaagtcaagaaggc
acaaagtatattcataatctccaaggcctatttgctcttccttttggtagaacagctaaa
ccagctcacattgcaaaggttaaaatgaagttccgttttctgggaaaactaatggctaag
gcgatcatggatttcagattggtggaccttccccttggccttcctttttacaaatggatg
ttacgacaggaaacttccttaacttcacacgacttgtttaatattgatccagtggtagct
agatcagtgtatcatcttgaagatatagtgagacagaagaaaagacttgaacaggacaaa
tcacagaccaaagaaagtttacagtatgcattggagaccctcaatatgaatggctgctca
gtggaagatctagggctggatttcacattacctgggtttcccaatatagagctgaaaaaa
gggggaaaagatatacctgtcaccatccacaatttagaagagtatctcagactggttata
ttctgggcactaaatgaaggtgtttccagacaatttgattctttcagagatggatttgaa
tcagtcttccccctcagtcatcttcagtacttctatcctgaagagttggatcagctcctg
tgtggcagtaaaacagacacttgggatgcaaagacgttaatggaatgctgcaggccagat
catggttatacacatgacagtcgagctgtgaagtacctgtttgaaattcttagtagtctt
gatagtgagcaacaaagattatttctccagtttgtgaccggtagccctagactgccagta
ggaggctttcgaagtttgaatcctccactgacaattgtacgcaagacatttgagtctaca
gaaaatccagatgacttcttgccctcagtaatgacttgtgtgaattatctcaaattgccg
gactattcaagtattgagataatgcgtgaaaaactcttgatagctgcaagagaagggcag
cagtcattccatctttcctga
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integrated database retrieval system
