Chelonia mydas (green sea turtle): 102935002
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Entry
102935002 CDS
T02989
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102935002 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmy04121
]
102935002 (MID1)
Enzymes [BR:
cmy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102935002 (MID1)
Ubiquitin system [BR:
cmy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102935002 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
PRY
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
FN3_DSCAM-DSCAML_C
TRIM_CC
zf-C3HC4_3
zf-RING_2
Pur_ac_phosph_N
zf-C3HC4_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
102935002
NCBI-ProteinID:
XP_027678366
LinkDB
All DBs
Position
1:complement(130537676..130855206)
Genome browser
AA seq
706 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR
YVITLNQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNSMSSSEKVLCQ
FCDQDPAQEAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKGGMVEQHSRSSDAFPNLSSK
NWTKSLMQTGCHEISVSGWQNLENNLTNLIKRNTELETLLAKLIQTCQHVEVNASRQETK
LTEECDLLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQIANCKQCIERSTSLISQAEQSLK
ENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFDTFALDFTREKKLLECLDYLTA
PNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTIFTGQANVVSLCNSADSWMIVP
NIKQNHYTVHGLQSGTKYIFIVKAINQAGSRNSEPGKLKTNSQPFKLDPKSAHRKLKVSH
DNLTVERDETSSKKSHTPERFTSQGSYGIAGNVFIDSGRHYWEVVISGSTWYAIGISYKT
APKHEWIGKNSASWVLCRCNNAWVVRHNSKEIPIEPAPHLRRVGILLDYDNGSLAFYDAL
NSLHLYTFDITFAQPVCPTFTVWNKCLTIITGLPIPDHLDCTEQLP
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggaattgacctgccctatctgtctggagctgtttgaggaccca
ctgctgctgccttgtgctcacagcctctgtttcaactgtgcgcatcgcatattggtctcc
cactgtgccaccaacgaatcagtggaatccatcactgccttccagtgccctacttgtcgt
tatgtcatcactctcaatcaacgtggtctagacggactgaagcgcaacgtcaccctgcag
aatattatcgacaggtttcagaaagcgtcagtgagtgggcccaattctcctagcgaaacc
cgccgagagcgggcatttgatagcaacagcatgtcatccagtgaaaaagttctctgccag
ttctgtgaccaggaccctgcccaggaagcagtgaagacctgtgtcacttgcgaggtgtcc
tactgcgaggagtgcctgaaagcgactcacccgaacaagaagccattcacgggccaccgt
ttgatagagcctattccagactctcacatccgaggattaatgtgtctggagcatgaggac
gagaaagttaacatgtactgcgtgactgatgaccagttaatctgtgccttgtgtaaactg
gttggacggcatcgtgatcatcaggtggcagctttgagtgagcgctatgacaaattaaag
gggggaatggtggagcagcactccagaagttcagatgctttcccaaacctctcgtctaaa
aactggactaaaagtctcatgcaaacaggatgtcatgagatttctgtttctggctggcaa
aatttggagaataacctcacgaaccttattaagaggaatactgaactggaaactctcttg
gctaaactcattcaaacctgccaacatgtggaagtgaatgcatcgcgacaagaaaccaag
ctgacagaggaatgtgacctgctcattgaaataatccaacagagacgacaaattattgga
accaaaataaaggaagggaaggtggtgagactgagaaaactggctcagcagattgcaaac
tgcaaacagtgcattgaacgctctacatctctcatctctcaggccgaacagtctctgaag
gagaatgatcatgcacgcttcttgcagacggctaaaaatatcactgagagggtctccatg
gctactgcatcctctcaagtgttaatccctgaaattaatctcaatgatactttcgatact
tttgcgcttgattttaccagggagaaaaaattgctggaatgcctcgattatcttacagct
cctaacccgccaaccattagagaagagctctgtacagcttcttacgacacaatcactgtc
cactggacctcagatgatgagttcagtgtggtctcatatgagctgcaatataccatcttt
actggacaagctaatgtagttagtttatgtaactcagccgacagttggatgattgttcca
aatatcaaacaaaaccactacacagtgcatgggttacagagtggcactaagtacatcttc
attgtcaaggccattaatcaggcgggcagccgaaacagtgagccaggcaagctgaagaca
aacagccagccatttaaactggaccccaagtctgcccacagaaagttgaaggtgtcccat
gataacctgacagtggagcgtgatgaaacttcttccaaaaagagccacacacccgagcga
ttcaccagccaagggagctatggaatagctggaaatgtgtttatcgacagtggacggcat
tactgggaagtggttataagtgggagtacatggtatgcaattggtatttcttacaagacc
gcgccaaaacatgagtggatcggaaagaattctgcctcttgggtgctttgccgttgtaat
aatgcctgggtggtgagacataacagcaaagaaattcctatcgagcctgctcctcacctc
cgtcgtgttgggattttgctggactacgacaacggttcccttgccttttatgatgctttg
aactctctacacctttacacttttgacataacctttgcacagcctgtgtgccccacattc
actgtgtggaataaatgtttgacaattataacaggcctgcctatcccagatcacttagac
tgcactgagcagcttccgtga
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