Chelonia mydas (green sea turtle): 102935525
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Entry
102935525 CDS
T02989
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X2
KO
K16474
intraflagellar transport protein 88
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cmy03037
]
102935525 (IFT88)
Cilium and associated proteins [BR:
cmy03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
102935525 (IFT88)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_12
TPR_6
TPR_19
TPR_14
TPR_7
TPR_16
ANAPC3
TPR_11
TPR_17
ARM_TT21_4th
TPR_10
TPR_CcmH_CycH
ARM_TT21_5th
TPR_9
TPR-S
TPR_15
HEAT_Nup120
HAT_PRP39_C
DUF6584
ARM_TT21
TPR_21
ARM_TT21_2nd
Consortin_N
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
102935525
NCBI-ProteinID:
XP_037746794
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Position
1:40226573..40304243
Genome browser
AA seq
798 aa
AA seq
DB search
MMQNVHLAPKADEDDLYSGYNDYNPTFDTEITAKIPGTSASRPLATGFGSKTALSSSMGR
PMTGAIQDGVARPLTAVHAAGYTKAALRGSVFDPLGQARGPAPPLEMKNEDTPEEKIRQL
EKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQIASPENINLDLTYSVLF
NLASQYSANEMYAEALNTYQVIVKNKMFSNGGRLKVNMANIYLKQRNYSKAIKFYRMALD
QIPSIHKEMRIKIMQNIGVAFIKTGQYTDGISSFEHIMSTSPNLKAGFNLILCYFAIGDR
EQMKKAFQKLITVPLEIDYDDKYISPNDDPHTNLLIEAIKNDQLRQMERERKGMAEKYIM
TAAKLIAPVIETSFAIGYDWCVEVVKASHYVELANDLEINKAITYLRQKDFYQAVETLKM
FEKKDSRVKSAAATNLSFLYYLENEFAQATNYADLAVNSDRYNPSALTNKGNTVFANGDY
EKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRIDEALDCFLKLQAILRNSAQVLYQIAS
LYEIMEDPNQAIEWLMQLISVVPTDSYALSKLGELYDNEGDKSQAFQYYYESYRYFPSNI
EVIEWLGAYYIDTQFCEKAIQYFERAALIQPTQVKWQLMVASCYRRSGNYQKSLDTYKEI
HRKFPDNVECLRFLVRLCTDMGLKEVQEYATKLKRVEKLKEIREQRVKSGRDGSARSRRE
GSGSGDSGGSAKGERLSAKLRALPGTNEPYESSSNKEIDASYVDPLGPQTERPKTAARKR
MDEDEFADEELGEDLLPE
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtccacctggcacctaaagcagatgaagatgatctttattcgggctac
aatgattataaccccacctttgacacagagataacagccaaaattccaggcacatcagct
tcacgacctttagctacaggatttgggtcaaagacagcattatcgtcatcaatgggaaga
ccaatgacaggagctatacaggatggagttgctcgacctctaacagcagttcatgcagca
ggttacactaaagcagctttgagaggttctgtatttgatccccttggtcaagcaagaggt
cctgctcctcctttagaaatgaaaaatgaagatactccagaagaaaagattagacagtta
gaaaaaaaagtgaatgagttggttgaagaaagctgcattgccaacagctgtggagactta
aaattggctctggaaaaggcaaaagatgctggaagaaaggaaagagtgttggtgaggcaa
cgtgaacaaattgcatctccagaaaacatcaacttagatctcacttactcagttcttttc
aatttggccagccaatattctgctaatgaaatgtatgctgaagcactaaatacatatcaa
gtcatagtgaaaaataagatgttcagcaacggaggcagactgaaggtgaatatggcaaat
atttatttaaaacaacgaaactattcaaaagctatcaaattctaccgcatggctctagat
cagattccaagtatccataaagaaatgaggattaaaataatgcagaacattggagttgca
tttattaaaactggccagtacactgatggcattagttcctttgaacacataatgagcaca
tctccaaacctgaaagcaggcttcaacctgatcctttgttattttgccattggagaccgt
gaacaaatgaaaaaagctttccaaaaactgatcactgttccattggaaattgattatgat
gacaaatatatttcaccaaatgatgatccacatactaacctattgattgaagccattaaa
aatgatcaattaaggcaaatggaacgtgaaaggaaaggcatggcagaaaaatatatcatg
acagctgcaaaattgattgcacctgtgattgaaacctcctttgccataggctatgactgg
tgtgttgaagtagtaaaagcttcccactatgtagagttagccaatgacctggaaataaat
aaagcaattacatatttgaggcaaaaggacttctatcaggctgtggagactttaaaaatg
tttgaaaaaaaggatagcagagtaaaaagtgcagctgcaacaaacctttcatttctttat
tatttggagaatgaatttgcacaagcaaccaactatgcagatttagctgtgaattctgat
agatacaacccatcggctctcactaataaaggaaatactgtgtttgcaaatggagactat
gaaaaagcagcagagttttataaggaagctttaaggaatgattcctcatgcactgaagca
ctttacaatataggtttaacatataaaaagttaaacagaatagacgaggctttggattgt
tttctgaaacttcaggcaatccttcgaaacagtgcccaagttctctaccaaatagcaagc
ttatatgaaataatggaggatcccaaccaagccatagagtggctcatgcagcttatcagt
gtagttccaactgattcatatgcactgtcgaaactaggggaattgtatgataatgaaggt
gataaatcccaagcttttcagtattactatgagtcatatcggtatttcccttcgaacatt
gaggtcattgagtggcttggagcctattacattgatacccagttttgtgaaaaagccatt
cagtactttgagagagcagcacttattcaaccaacacaagtgaaatggcaactgatggtt
gctagttgttatagaagaagtggtaactaccaaaaatctctagatacatataaggaaata
cacagaaaatttccagacaatgttgaatgtctacggttcttagttcgtctctgcacagat
atgggactgaaagaagttcaagaatacgcgacaaagctcaagagagtggaaaaactaaaa
gaaataagggaacagcgtgttaaatctggcagagatggcagtgcgcgtagccgcagagaa
gggagtggtagcggggatagtggcggtagtgctaaaggggaacgactaagtgccaagctg
agggctctgcctggaacaaatgagccctatgaaagcagcagtaataaagaaatagatgct
tcctatgtagatccacttggaccacaaacagagagaccaaaaactgcagcaagaaaaaga
atggatgaagatgagtttgctgatgaagagttaggagaggatttgcttccagaataa
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