Chelonia mydas (green sea turtle): 102935992
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Entry
102935992 CDS
T02989
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102935992 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102935992 (CSTF2)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
102935992 (CSTF2)
U7-dependent histone pre-mRNA processing factors
102935992 (CSTF2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
102935992
NCBI-ProteinID:
XP_037765314
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Position
9:complement(64096192..64114145)
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AA seq
621 aa
AA seq
DB search
MAGLAVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPIN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTSVPPLIPGNPQPVPGPGPGPGPGPGPGPGPNAQMNQQNPPSSQPQ
PIGGMHVNGAPPLMQPPMQGGVPAPGQMPASVAGPGPLAPGGGMQPQVGMPGGGPVPLER
GQGNLQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTL
LSVTGEVEPRGYLGPPHQGPPMHHMPGHDNRGPPPHEMRVGPMGEPRPLMGEPRGPLMDA
RGGRDPRGMEPRGMEPRGMEPRGMEPRGMEPRGMEPRGMEPRGMEPRGMEPRGMEPRGME
PRGMEPRGMDARGMEPRGPGPNPRGPMPGGIQGPGPLNLGASGPQGPRQVPNMPGAGIQG
GGMPGAGIQAGGMPGAVVQGAGQPGGFSPGQNQVTPQDHEKAALIMQVLQLTADQIAMLP
PEQRQSILILKEQIQKSTGAP
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctggcggtgcgggaccccgcggtggatcgctcgctgcgctccgtgttcgtg
gggaatattccatacgaagccacagaggagcagctaaaggacattttctcagaggtcgga
cctgtcgtcagtttcaggttggtgtatgacagggagacaggcaaaccaaagggatatggc
ttttgtgaataccaagaccaggagacagcactcagcgccatgcggaacctgaatgggcgt
gagttcagcgggagggcattgcgtgtggacaacgcagccagtgagaagaataaggaggag
ctgaagagcctgggcacaggtgcccctatcatagagtcaccatatggagaccctataaat
cctgaagacgcccccgagtctatcagcagggcagttgccagcctgccacctgagcagatg
tttgagctgatgaagcagatgaagttgtgtgtgcagaacagccctcaggaggcacggaac
atgctgctccagaaccctcagctggcatatgccctgctgcaggcccaagtggtgatgagg
atcgtcgatccagagattgctctgaaaattctgcatcgtcagaccagtgttccacctctg
attccaggcaacccacagccagttcctgggcctgggcctgggcctggacccgggcccggg
cctggtccaggtcctaatgcacagatgaaccagcagaatcccccatcgtcccagccacag
cccataggtggcatgcatgtaaatggagctcctcctctgatgcagcctcctatgcagggt
ggagtgccagccccaggacagatgccagcctccgtagccggccccggccccttggctcct
ggaggtggaatgcagcctcaggtcgggatgccgggaggtggaccagtgcccttggaacgt
ggacaaggaaacctgcagctctcgcccgtgggacctgccaggcctgcatctatcgagcga
gttcaagtgcccatgccagacccgagggcccctatgcagcgtggaccattacctgctagc
ggcccacctccccggggccttctgggagatgctccaaatgacccacgtggagggaccctg
ctctcagtcactggagaagtggagcccagaggttaccttgggccaccccaccaaggtcca
cccatgcaccatatgcccggccatgacaatcgtggtccacccccacatgaaatgagggta
ggaccaatgggagaacccaggccactgatgggagaacctagagggcctttgatggatgct
cgaggtggaagagatcccaggggcatggagccgagaggcatggagcccaggggcatggag
ccgagaggcatggagcccaggggcatggagccaagaggcatggagcccaggggcatggag
ccgagaggcatggagcccaggggcatggaaccgagaggcatggagcccaggggcatggag
cccagagggatggaacccagaggcatggatgccagaggaatggagcccaggggccctggc
cccaacccaaggggcccaatgcctggtggaattcaaggacctgggccacttaacttggga
gcaagtggccctcagggacctagacaggttcccaacatgccaggggcaggcatacaagga
ggtggcatgccaggggcaggcatacaagcaggaggcatgccaggggcggtggtacaagga
gctggccagccaggtggctttagccctgggcagaaccaggtcactccccaagatcatgag
aaggctgccctgatcatgcaggttctccagctaactgcagaccagatcgccatgctgcct
ccagagcaaaggcaaagcatccttatcctaaaggagcagatccagaaatccactggggct
ccataa
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