Chelonia mydas (green sea turtle): 102935993
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Entry
102935993 CDS
T02989
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X4
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
102935993 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102935993 (DDX3X)
03041 Spliceosome [BR:
cmy03041
]
102935993 (DDX3X)
03036 Chromosome and associated proteins [BR:
cmy03036
]
102935993 (DDX3X)
Enzymes [BR:
cmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102935993 (DDX3X)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102935993 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
102935993 (DDX3X)
Spliceosome [BR:
cmy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102935993 (DDX3X)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102935993 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102935993
NCBI-ProteinID:
XP_007064508
LinkDB
All DBs
Position
1:150854666..150896570
Genome browser
AA seq
680 aa
AA seq
DB search
MSHVAVENALSLDQQFAGLDLNSSDSQSGGSTAKGRYIPPHLRNREPSKQGFDSGWNSGR
DKDAYSSFGARSDRGGKSSFFSERGNGSRGGRYEDRGRGGDYDGIGSRGDRGGFGRFDRG
GNSRWSEKSDEDDWSKPLPPSDRLEQELFSGGNTGINFEKYDDIPVEATGSNCPPHIESF
SDLDMGEIIMGNIELTRYTRPTPVQKHAIPIIKDKRDLMACAQTGSGKTAAFLLPILSQI
YTDGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSKVRPCVVYG
GADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIR
RIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWV
EESDKRSFLLDLLNATGKDCLGEFQHSSNGSGKDSLTLVFVETKKGADSLEDFLYHEGYA
CTSIHGDRSQRDREEALHQFRSGRSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVH
RIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEQIHKGGSSRG
RSKSRFSGGFGARDYRTSSGGSSSSFSSSRPSSSRSGGGSSSSGHGGSRGFGGGGYGGGF
YNSDGYGGNYNSQGVDWWGN
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgccctcagtctagaccagcagtttgctggtctagac
ctgaattcctcagactctcagagtggtggaagcacagcaaaaggtcgatatattcctcct
catttacggaatagagaaccttcaaaacagggatttgacagtgggtggaattctggtaga
gacaaggatgcatacagcagctttggtgctcggagtgaccgtggtggaaaatcaagcttc
tttagtgaacgtgggaatgggtcaagaggaggcagatatgaggaccgtggaagaggcggt
gactatgatggcattggcagtcgtggtgataggggtggctttggcagatttgaccgtggt
ggaaatagtcgctggtctgaaaagtcagatgaagatgactggtcaaaaccacttccacca
agtgatcgtctggaacaagagctcttctccggaggcaatacaggcattaactttgagaaa
tatgatgacattcctgttgaggcaacaggcagcaactgtcctccacatattgaaagtttc
agtgaccttgacatgggagaaattatcatgggcaacattgagctcactcgctacacccgt
cctactccagttcagaaacatgctatacctatcatcaaggacaagagagatttgatggcc
tgtgcccagacaggttctgggaaaactgctgcatttcttctaccaatattgagtcagatc
tatacagatggtccaggtgatgctctgagggctatgaaggaaaatggaaggtatggacgc
cgtaagcaatacccaatctctctagtcctggctccaactagagaactggcagtgcagatc
tatgaagaagccagaaagtttgcatatcgttccaaagttcgtccttgtgttgtctatggt
ggtgctgacattggtcaacagatacgtgacttggaacgtgggtgtcacttgcttgtggca
actccaggacgactggttgacatgatggagaggggaaagattggattggacttttgcaaa
tatctggtactggatgaagctgatcgcatgcttgatatggggtttgagcctcaaattcgc
cgtattgttgaacaagatactatgccaccaaagggagttcgtcataccatgatgttcagt
gctacttttcccaaggaaatccagatgcttgcccgtgacttcctggatgaatatatcttc
ctggctgttggcagagttggctctacatctgagaacatcacacagaaagtagtgtgggtg
gaagagtcagacaaacggtcatttctgcttgacctgctaaatgccacaggtaaagactgt
ttgggagaatttcaacacagctctaatggctcaggcaaagattcactgactctggtgttc
gtggagactaaaaagggagctgattctctggaggactttctctaccacgaaggatacgct
tgtacaagcatccatggagatcgctctcagagagacagagaagaagctctgcaccagttc
cgctcaggcagaagcccaattctggttgccacagcagttgcagcaagaggattggacatt
tcaaatgtgaaacacgtcataaactttgacttgccaagtgacattgaagaatatgtgcat
cgcattggtcgtacaggccgtgtgggaaaccttgggcttgccacctcattcttcaatgag
aggaacataaacatcaccaaggacttgctggatctccttgttgaagcgaaacaggaagta
ccatcgtggttggaaaacatggcttatgagcagattcataagggtggtagcagtcgtggg
cgttcgaagagtcggttcagtggaggatttggtgccagagactatcgaacaagtagcggt
ggcagcagtagtagctttagcagtagtcgaccaagcagcagccgcagcggtggtggcagt
agcagcagcggccatggaggcagcagaggatttggaggtggtggctatggaggcggcttc
tacaacagtgatggatatggaggaaactataactcccagggggttgactggtggggcaac
tga
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