Chelonia mydas (green sea turtle): 102936240
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Entry
102936240 CDS
T02989
Symbol
APEX2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmy03400
]
102936240 (APEX2)
Enzymes [BR:
cmy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
102936240 (APEX2)
DNA repair and recombination proteins [BR:
cmy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
102936240 (APEX2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
DUF4675
Motif
Other DBs
NCBI-GeneID:
102936240
NCBI-ProteinID:
XP_037744458
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All DBs
Position
23:complement(18656583..18660552)
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AA seq
515 aa
AA seq
DB search
MRLLSWNVAGLRAGPGPAGLGALGGDVICLQETRVTRDLLEEPLAMVDGYNSYFSFCRTR
SGYSGVATFCKDSATPLAAEEGLSGLLAQPGEGGAVGCYGDLGAFTPQELKALDSEGRAV
ITHHRIRTSAQQETTLTVINVYCPRADPQRPERAAYQASFYRLLQGRAEALLRDGGHVVI
LGDINTSHRPIDHCEPGDLEAFQEHPGRRWLDGFLWVPDGPPGQGLFVDTFRLLHPSQPY
AFTCWRVDTGARLTNHGTRLDYVLADRALALAELRDARVLPEVPGSDHCPVLAELAATFL
PARRCPPLCTRHMPEFAGTQQKLSRFLVRVERGVGVGVGAGAGAGVGVTCQGAGVGRRCS
TRRGRRPPRGQGDLLSYFRAAQGQLRTGTTLNALGQSGQGPAQDAPGHRTQEMAHDAPGQ
GGQREPCNGLVPRELMMGQAAGTQDSCPARWRAVLPGPAPPPCCPAHGQPCALRTVRKPG
PNRGRRFYVCAQPPGRPSDPRARCDFFRWASKGRS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgctgagctggaacgtggccgggctccgggccgggccgggccccgcggggctc
ggggcgctgggcggggacgtgatctgcctgcaggagacccgcgtcacgcgggacctgctg
gaggagccactggccatggtggatggctacaactcctacttcagcttctgccgcacccgg
agcggctactcaggtgtggcgaccttctgtaaggacagtgccaccccgctggcagcggag
gaggggctctctgggctcctggcccagcctggggagggcggtgccgtggggtgttacgga
gacctaggggccttcacaccccaagagctgaaggcgctggacagcgaggggcgcgcggtg
atcacccaccaccgcatacgcacctcagcacagcaggagaccaccctgacggtgatcaac
gtgtactgcccccgggccgacccccagcgccccgagcgcgccgcctaccaggcatccttc
taccgcctgctgcagggccgggctgaggcgctgctgagagacgggggccacgttgtgatc
ttgggggacatcaacacatcgcatcggcccatcgaccactgcgagccaggggacctggaa
gcgttccaggagcaccccggccggcgctggctggacgggttcctatgggtgccagacggg
ccccccgggcaggggctcttcgtcgacaccttccgccttctgcaccccagccagccctat
gccttcacctgttggcgcgtcgacaccggcgcccggctcaccaaccacggcacacggcta
gactacgtcctggctgaccgggccctggcgctggccgagctgcgggacgcccgcgtcctg
cccgaggtgcctggctccgaccactgccccgtgctggccgagctggcggccaccttcctg
ccggcacgccgctgccccccgctctgcacccgccacatgcctgaattcgccggcacccag
cagaagctcagccgctttttggtcagggtggagcggggagtgggagtgggagtgggagcg
ggcgcgggcgcgggcgtgggcgtgacgtgtcagggggccggggtggggcggaggtgctcc
acacggagggggagacgcccacccagggggcaaggggacctgctgagctacttcagagcc
gcacagggccagctgaggacaggcacgaccctgaatgcactggggcagagcggacaaggg
ccggcccaggatgccccagggcacaggacacaggagatggcccatgatgcaccagggcag
ggcggacaacgggagccctgcaatggcttggtgcccagggagctgatgatggggcaggca
gcaggcacccaggacagctgcccggcccgctggcgtgcggtgctgcccggcccggccccc
ccaccctgctgcccggcccacgggcagccctgcgccctgcgcaccgtccgcaaacccggc
cccaaccgtgggcggcgtttctacgtgtgcgcccagccccctgggcgccccagcgacccc
cgcgcccgctgcgacttcttccgctgggccagcaaggggcgctcatga
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