Chelonia mydas (green sea turtle): 102936346
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Entry
102936346 CDS
T02989
Symbol
LRP6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X2
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04150
mTOR signaling pathway
cmy04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
102936346 (LRP6)
04150 mTOR signaling pathway
102936346 (LRP6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmy04131
]
102936346 (LRP6)
Membrane trafficking [BR:
cmy04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
102936346 (LRP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
EGF_LRP2
SGL
cEGF
EGF
DUF1547
Motif
Other DBs
NCBI-GeneID:
102936346
NCBI-ProteinID:
XP_037770107
LinkDB
All DBs
Position
1:222269450..222465582
Genome browser
AA seq
1612 aa
AA seq
DB search
MGPALRSLLLCSFCALVRAAPLLLYANRRDLRLVDAENGKENATVVVGGLEDAAAVDFVF
VRGLIYWSDVSEEAIKRTEFNKTGSIQNVVISGLLSPDGLACDWLGEKLYWTDSETNRIE
VSNLDGSLRKVLFWQELDQPRAIALDPARGFMYWTDWGEVPKIERAGMDGSSRSVIINTD
IYWPNGLTLDYEEWKLYWADAKLNFIHKSNLDGTHRQAVVKGSLPHPFALTLFGDTLYWT
DWNTHSILACNKYSGEDLREIHSNIFSPMDIHVFSQQRQPNATNPCGSNNGGCSHLCLMS
PIKPSYQCACPTGVKLLENGKNCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIR
HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSASQFVVTAQIAHPDGIAVDWVARNLYWT
DTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMIGYMYWTDWGEIPKIERAALDGSD
RVVLVNTSLGWPNGLALDYAESKIYWGDAKTDKIEVMNADGSSRRVLVEDKLPHIFGFTL
LGDYIYWTDWQRRSIERVHKRTAEREIIIDQLPDLMGLKATNVHQIIGANPCAEDNGGCS
HLCLYRPQGPRCACPIGLELISDMRTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLTG
VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLY
WADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG
SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLDREVIADDLPHPFGLTQ
YQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQAGWNECASSNGHC
SHLCLAVPVGGFVCGCPAHYSLNSDNRTCSAPTTFLLFSQKNAINRMVIDEQQSPDIILP
IHSLRNVRAIDYDPLDKQLYWIDSRQNIIRKAQEDGSQSLTVVTSLVPNQNLDMQPYDLS
IDIYSRYIYWTCEATNVINVTRLDGRPMGVVLKGEDDRPRAIVVNPEKGYMYFTNLQERS
PKIERAALDGTEREILFFSGLSKPIALALDSQLSKLFWADSELRRIESSDLSGANRIVLE
DSNILQPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKELNIQ
EYRQHPCSQDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPQQFTCFTGE
IDCIPVAWRCDGFTECEDHSDEKNCPVCSDSQFQCESGQCIDSIFRCNGEANCQDNSDEK
NCEVLCLTDQFRCASGQCIGKNKKCDHNLDCSDSSDEQGCYTTEEPAPQANNTIGSIIGV
ILTVFVVGAMYFICQRVLCPRMKGDGETMTNDYVVHGPASVPLGYVPHPSSLSGSLPGMS
RGKSVISSLSIMAGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATERSHYTM
EFGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYAPSRRVTTAVTKGYTSDLN
YDSEPVPPPPTPRSQYLSAEENYESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atggggcccgcgctgcggagcctacttctctgcagtttctgcgccctggtgcgagctgcc
ccgctgctgctgtatgcaaaccgacgtgatctgcgattggtggatgctgaaaatgggaaa
gagaatgctacagttgtagtgggtggtttggaagatgcagccgcagtggactttgtgttt
gtccgcgggttgatatactggagtgatgtaagcgaagaagccattaaacgaacagaattt
aacaaaactgggagtatacagaatgtggtcatttctgggcttttatcacctgacgggctg
gcatgcgattggctgggagagaaactatactggacagattctgaaacaaatcggattgaa
gtttccaatttagacggatctttgagaaaagttttattttggcaagaattggatcagccc
agagcaatagccttagatcctgcaagagggttcatgtattggacagattggggagaagtg
ccaaagatagaacgtgctgggatggatggttcaagccgctccgttataataaacacagat
atttactggccaaatggattgactttggattatgaggaatggaagctttattgggcagat
gctaaactgaacttcatccacaaatcaaacctggatggaactcatcggcaagcagtggtt
aaaggttctcttccacatccttttgctttgactttgtttggggacacattgtactggact
gactggaacactcattctattttggcttgcaacaagtattctggggaggacctgcgtgaa
atacattccaacattttctctcccatggatatccatgttttcagtcaacagaggcagcca
aatgctacaaacccatgtggaagtaataatggtggctgctcccacttgtgtttgatgtct
cctatcaagccttcttatcagtgtgcttgtcccactggtgtgaaactccttgagaatgga
aagaactgcaaagatggtgccaccgaattactgctcctagcccgcaggacggacttgagg
cgcatttccttggataccccggattttacagacattgtcttgcagctagaggacatccgt
catgccattgctattgactatgatcccgtggaaggatacatctattggactgatgatgag
gtgagggccattcgccgctctttcatagatggatcagctagtcagttcgttgtcacggca
cagattgcgcatcccgatggcattgctgtggactgggttgcccgaaacctttattggact
gacaccggcactgaccgcatagaagtgacaagacttaacgggactatgagaaagatcttg
atatcagaagacttggaagaaccaagagcaatcgtattggatcccatgattggatacatg
tattggactgactggggagaaattccaaagattgagagggctgcattagatgggtcagac
agagttgtgctggtgaatacttcgcttggctggccaaatggactggccctggattatgca
gaaagcaaaatatattggggagatgcgaaaacagacaaaattgaggtcatgaatgcagat
ggcagtagcaggagagttctggtggaggacaagctgcctcacatctttggattcactttg
ctgggagattacatctattggaccgattggcaaaggcgtagcattgagcgagtgcataag
cgtacagcagaaagagaaatcatcatagaccaactgcctgacctaatgggcctgaaagct
actaatgtccatcagatcattggtgcaaacccttgtgcagaggacaatggtggttgcagc
cacctctgtctgtatagacctcagggccctcgctgcgcctgtcccataggcttagagctc
atcagtgatatgaggacttgcattgtcccagaagctttcctgctcttttctcggagagca
gatatcaggcgaatctctttggaaaccaacaacaacaatgttgccatcccacttacggga
gtcaaagaagcttctgctctggattttgacgtgacagacaatcggatttactggacagat
atctcactgaagactatcagcagggcatttatgaacggcagtgcactcgaacatgtggtg
gagtttggcttggattacccagaaggcatggcagtagactggctagggaagaacctgtat
tgggctgataccggaacaaatcgtattgaagtgtcaaagctggatggacaacatcgtcaa
gtattggtgtggaaggatctggacagcccccgggcactggcattagaccctgctgaaggg
tttatgtactggactgagtggggtgggaagcccaagattgaccgagctgccatggatgga
agtgaacgtaccactttggtaccaaacgtggggcgagctaatgggctaacaattgattat
gcaaaaagaagactttactggactgatctagataccaacttaatagaatcttcaaatatg
ctaggccttgaccgtgaggttatagccgatgacttgcctcacccgtttggcttgactcaa
taccaggattacatctattggacagattggagccggcgcagcattgagagagccaacaag
accagtggccagaaccggaccatcatccaaggccatttggattatgtgatggatatcctg
gtcttccattcctcaagacaggcaggctggaatgaatgtgcatctagcaatgggcactgc
tcccatctttgcttggcagtgccagttggtggttttgtgtgtggatgcccagctcattat
tccttgaattctgacaacaggacctgtagtgctcctacaactttcctgttgttcagtcag
aagaacgcaattaatcgcatggtgatagatgagcagcagagtccagatatcatactccct
atccacagtctcaggaatgtccgggccatcgattatgaccccctagataagcaactttac
tggattgactctcggcagaacattatccggaaggcacaagaagatggcagccagagcctt
actgtggtgacgagtctggttcccaatcagaacctggacatgcagccctatgatctgagc
attgacatctacagccgctacatctactggacttgtgaagccactaatgtgattaatgtg
acacgcttggatgggagaccgatgggcgtggtgctgaaaggagaagatgacaggccccgg
gccattgtggtgaacccagagaaagggtacatgtatttcactaatctgcaggaaaggtca
cccaaaatcgagagggcagcactggatggaactgaacgggagatcctctttttcagtggc
ttgagtaaacctattgccctggcccttgacagccagctgagcaagttattctgggctgat
tcagagctccggagaattgagagcagtgacctttcaggggcaaatcgaatagttttagaa
gactccaatatcttgcaacccgttgggctgacagtatttgaaaactggctgtactggatt
gacaagcaacaacaaatgattgaaaaaatcgacatgactggtcgagaaggacgtacgaaa
gtccaggctcgtattgcacagctcagcgacatacatgcagttaaagaactaaacatccag
gaatacagacagcatccttgttctcaagataatggcgggtgttcgcacatttgtattgtg
aagggtgacggtacaacccggtgttcttgtccagtgcaccttgttctgcttcaggatgaa
ctatcctgtggagaacccccaacatgctcccctcagcaattcacctgtttcacgggggag
attgactgcatcccagtggcctggcgctgtgatggattcactgaatgcgaagaccatagt
gatgaaaagaactgccctgtctgttcagactcccagttccagtgtgaaagcggacagtgc
atagacagcattttccggtgcaatggagaggcaaattgccaggacaactcagatgaaaag
aactgtgaagtgctttgtttaaccgatcagttccgctgcgccagtggccagtgcattggg
aaaaacaagaaatgtgatcacaacttggactgcagtgacagctccgatgagcaaggatgc
tacacaacagaggagccagcaccacaagccaacaataccataggctcgatcattggagtg
atcctcactgtttttgtggttggagcaatgtactttatctgccagagggtgctgtgccca
cgcatgaagggggatggggaaacaatgactaatgactatgtggtgcacggaccagcctcc
gtaccacttggttatgtgcctcacccaagctctctgtcagggtctctcccaggaatgtct
cgtggtaaatctgtgatcagctccctcagcattatggccggaagtagcggccctccctac
gacagagcccatgtcacaggggcatcctccagtagttcttcgagcaccaagggcacttac
ttccctccaattttgaaccctccgccatcaccagctactgaacgctcacattacaccatg
gaatttggttattcttcaaacagtccttccactcatagatcctacagctacaggccatac
agctaccggcattttgcacctcccaccacgccctgcagcacggacgtttgtgacagcgac
tacgcccccagccggcgggtcacaacagcagtgactaagggctacaccagtgatttgaac
tatgattccgagcccgtgccccctccaccgacgccaaggagccagtacctctcggcagag
gagaactatgaaagctgtccgccctccccatacacggaacggagctattcccatcacctc
tacccgccgcctccatccccctgcacggactcctcatga
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integrated database retrieval system
