KEGG   Chelonia mydas (green sea turtle): 102936348
Entry
102936348         CDS       T02989                                 
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy03082  ATP-dependent chromatin remodeling
cmy03083  Polycomb repressive complex
cmy04110  Cell cycle
cmy04330  Notch signaling pathway
cmy04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102936348 (HDAC2)
   03083 Polycomb repressive complex
    102936348 (HDAC2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    102936348 (HDAC2)
   04350 TGF-beta signaling pathway
    102936348 (HDAC2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    102936348 (HDAC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmy03036]
    102936348 (HDAC2)
Enzymes [BR:cmy01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     102936348 (HDAC2)
Chromosome and associated proteins [BR:cmy03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     102936348 (HDAC2)
   HDAC complexes
    Sin3A-HDAC complex
     102936348 (HDAC2)
    BRAF-HDAC complex
     102936348 (HDAC2)
    REST complex
     102936348 (HDAC2)
    SHIP complex
     102936348 (HDAC2)
    MiDAC complex
     102936348 (HDAC2)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     102936348 (HDAC2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102936348 (HDAC2)
  Chromatin remodeling factors
   NuRD complex
    102936348 (HDAC2)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 102936348
NCBI-ProteinID: XP_037750589
LinkDB
Position
3:complement(84827573..84891616)
AA seq 644 aa
MEHATRYSPMGERLRACAGAEAVLIVGRGRARTTPYLAQAGRRYHCVTLRVGPHTHFLCH
GGAFHRLPLGPEWGGVSPRGSASSAEGRRANGARDAGLRDAYVAPSPRLGRRVGASPFPA
VDGRVVAWLPPLPPASRVHARSAPSRPARPQPPGGPMAYSQGGGKKKVCYYYDGDIGNYY
YGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDN
MSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAK
KSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE
YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGA
DSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCE
IPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQA
IPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAKK
ARIEEDKKETEDKKTDVKEEDKSKDSSGEKTDTKGAKSELLSNP
NT seq 1935 nt   +upstreamnt  +downstreamnt
atggagcacgcgacgcgatacagcccgatgggcgagaggctccgcgcatgcgccggagca
gaggctgtcctcattgtggggagggggagagcgcgcaccaccccctacctcgcgcaggcg
ggccggcggtaccactgtgtaacgctgagggttgggccccacacccatttcctttgtcac
gggggcgccttccaccgcctcccgctcgggccagagtgggggggtgtctctccgcgcggc
tccgcgtccagcgctgaagggcggcgggcgaacggtgcgagggacgcggggctgagggac
gcgtacgtcgccccctccccccggctcggccgcagagtgggcgcgtcccccttccccgct
gttgatggtcgggtcgttgcgtggctgccgccgctgcccccagcgtcgcgagttcacgct
cgctcagctccctcacgcccggctcggcctcagcctcccggcggccccatggcgtacagt
cagggcggcggcaagaagaaagtctgttattactatgacggtgatattggaaactattat
tatgggcagggccatcccatgaaaccccataggatccgtatgactcacaacttgttgcta
aattatggcttgtacagaaaaatggaaatttatcgaccccataaagctacagctgaagaa
atgaccaagtaccacagtgacgaatacatcaaatttcttcgatcaataaggccagacaat
atgtctgaatatagcaagcagatgcagagatttaatgttggagaagattgtcctgtgttt
gatggactgtttgagttctgccagctgtcaacaggaggctctgttgctggggcagtaaaa
ttaaatagacaacagactgacatggctgttaattgggctggaggactccatcatgctaag
aagtcagaggcatctggtttctgttacgtcaatgatattgtgcttgctatcctagagctg
ctgaaatatcaccaaagagtgttgtacattgacattgatatccatcatggtgatggtgtt
gaagaagcattttacacaacggaccgtgtcatgacagtatcattccataaatatggtgaa
tattttcctggcacaggggacttaagggacattggagctgggaaaggcaaatactatgca
gttaattttccaatgagagatggtatagatgatgaatcatatgggcagatattcaagcca
atcatatccaaagtgatggagatgtaccagcccagtgccgtggtattgcagtgtggagca
gattcattatctggtgacaggttggggtgttttaatcttactgtcaaaggtcatgctaaa
tgtgtggaggttgtaaaaacttttaacttgccactgctgatgctaggaggaggaggatat
actattcgtaatgttgctcgatgttggacatatgagactgctgttgccttagactgtgaa
attcctaatgagttgccatacaatgactactttgagtatttcggaccagacttcaaactg
catattagtccatcaaatatgacaaaccagaacacgccagagtatatggaaaagatcaaa
cagcgcttatttgagaacttgcgtatgttgcctcatgcacctggagtacagatgcaagcc
attcccgaggatgctgttcatgaagacagtggagatgaggatggagaagatccagacaaa
cgcatttctattcgagcgtctgataagcggatagcctgtgatgaagaattctctgattct
gaggatgaaggggagggtggacgacgaaacgttgcagatcataagaaaggagcaaagaaa
gccagaatagaagaagacaagaaagagactgaggacaaaaaaactgatgttaaggaggaa
gataaatccaaggacagtagcggtgaaaagacagacaccaaaggagcgaaatcagaactg
ctcagcaatccttga

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