Chelonia mydas (green sea turtle): 102936692
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Entry
102936692 CDS
T02989
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X3
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102936692 (TNRC6C)
03036 Chromosome and associated proteins [BR:
cmy03036
]
102936692 (TNRC6C)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102936692 (TNRC6C)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102936692 (TNRC6C)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_HERC2
UBA_Ucp12
RRM_ACIN1
UBA_NBR1_C
THOC7
Motif
Other DBs
NCBI-GeneID:
102936692
NCBI-ProteinID:
XP_037769883
LinkDB
All DBs
Position
14
Genome browser
AA seq
1961 aa
AA seq
DB search
MLENSYKHVPEPIKTSLSQPQPAGTGTSTSTSTITNSSNGKRASANGQQPAASRYLPREV
PPRFRQQEQKQLLKRGQPLPTGTLTGASPPQGTGQAGASPPPQPGAGGQHHPSKTLTQTD
LSHSGLGDHYENSHWGQQPTFRSEANCSWDKVIIDRTDKEAWPSITGTESESASECTTET
DSASNCGSENSSMATGSAQGNFTGHTKKTNGNNGTNGALIQSTSNQSALGAGGANGNGNS
ARVWGVATGSNSGLTHCSASGGDGKMDNMIADGRSQNCWGASNSNAGINLNLNPNANPAA
WPVLGHEGTVGAGNPSSICSPVSAIGQNIGNQNGNPTSTLGAWGNLLPQESTEPQTSTSQ
NVSFSVQPQNLNTDGPNNTNPMNSSPNPINAMQTNGLPNWGMAVGMGAIISPHLQGLPGA
NGTSVSQVSGGNGEGMGSSVWGISPGNPATGNGNSGFSQGNGDTVNSALSAKQNGSSSAV
HKEGNGASAWDSGPPAGPGVLAWGRGSGNSSVGSMHSGAWGHPNRNTSNGVNGEWGKPPN
QHSNSDISGKGSAGWDSPSVTSQNPAMQQGNEQINSWAKAAASVTTASEESNDGGGGQNE
GNTGREGAGEARRRDKGVIDQGQVQLPRNDLDPRVLSNTGWGQTPVKQNTAWEFEESPRS
ERKNDNGTEAWGCTASQSSNSGGKNDGSIMNSTNTSSVSGWANSPPSAVPANTGWGDNNN
KAPNGPGGWGESASSTAVNAAAATAAKSGHAWSGTANQEDKSPTWGEPQKPKSQNWGDGQ
KSNPGWTSGSGDWTEPSSVPGHLAEGKKNGSGWDADNRSGSGWNDTTRSGTSGWGNGTNT
KANTGTSWGESLKPSPQQNWASKPQDNSVSNWGGAASVKQTGSGWVGGPVPPKQKESSEA
TGWEEPSPPSIRRKMEIDDGTSAWGDPNYNNNKTVNMWDRNNPVIQSSTTTNTTTTTTII
NTNMAEPQPSHQSSAQPNRSPLLGPAGWGEMPTVHTKTESSWGEPSSPSAAVDNGTSAWG
KPPSSGTGWGDNSAEPAGTYGRVNAPAAAPALCKPASKSMQEGWGSGGDEVNLSTSQWED
EEGDMWNNTASQESNSSCNSWGNAPKKGLQKGMKTSSKQDEAWIMNRLIKQLTDMGFPRE
PAEEALKSNNMNLDQAMSTLLEKKVEMDKRGMGVTDYNGMVTKPLGCRPPSISKESSMDR
PTFLDKDGGLVEEPTTSPFLPSPSLKLPLSNSALPNQTLGGIASGLGMQNLNSSRQIPSG
NLGMFGNSGAAQARTMQQPQQPPVQPLNSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGL
NPALLTSPINPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVSGPMRQQEQQVARTINN
MQQQIQQHQRQLAQALLMKQQPPPPHLSLHPSAGKSAMDSFSPHPQAPGLPDLQTKEQQS
SPNTFAPYPLAGLNPNMNVNSMDMTGGLSVKDTSQSQSRLPQWTHPNSMDNISSAASSLD
QNSSKHGAIPGGLSIGPSGKSSIDDSYGRYDLIQNSDSPASPPVAVPHSWSRAKSDSDKI
SNGSSINWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINTTIQDVNRYLLKSGDS
EYIEGTEGQLWLRIPSMPSGLEGSVLHGSIVQPQLLSRGFRLNGKRAWSSPTSSQNATLP
SSSAWPLSASGYSSSFSSIASAPSIAGKLSDIKSTWSSGPISHTQASLSHELWKVPRNTT
APTRPPPGLTNTKPSSTWGASPLGWTSSYSSGSAWSTDSSGRTSSWLVLRNLTPQIDGST
LRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTILAEFAGEEEV
NRFLAQGQPLPPTSSWQSNTGTNQTRMGSTSSSHGLVRNDAGHWNTPCLAGKGSSDLLWG
GVPQYSSSLWGPPSTDDGRVIGSPTPLNTLLPGDLLSGESI
NT seq
5886 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaaacagctacaagcatgtgccagaacctattaagaccagtttaagccagccc
cagcctgccggtaccggtaccagtacttccaccagcactattaccaacagcagcaatggc
aagcgtgcatctgctaatgggcagcagccagctgcatcccgttacctgcctcgtgaggtg
cctccacgcttccgccagcaagaacagaagcagctcttaaagagaggtcagccactgcct
actgggactctgacgggcgcaagcccaccacaaggtactggacaagcaggggcaagtcct
cctccacagccaggagcaggtggacagcatcatcccagtaagaccctaacccaaacagat
cttagtcacagtggtttgggagaccattatgaaaattcccactggggacagcagcccact
ttcagaagtgaagccaactgcagctgggataaagtgataatagataggactgacaaggaa
gcgtggccttccattacaggaactgagtctgaatctgcttcagaatgtactacagaaact
gactctgcctctaactgtggctcagagaacagtagcatggctacagggagtgcccaaggc
aacttcactggacatacaaagaaaactaatggcaataatggcaccaatggagcactcatc
caaagcacttctaaccagagtgcccttggagctggtggagcaaatggtaatggaaactca
gccagagtgtggggtgtggccacaggctccaactctggcctaactcactgctctgccagt
ggtggggatggaaagatggacaacatgattgcagatggtagaagtcaaaactgctggggt
gcttccaactcaaatgctggcattaatcttaaccttaaccctaatgccaatccagctgcc
tggcctgtactcggacatgaaggaactgtgggagcaggcaacccttccagtatttgtagt
ccagtcagtgccataggtcagaatatcggcaaccagaatggtaacccaacaagcacctta
ggtgcttggggaaacttgctgccgcaagagagcacagaaccacaaacgtccacttctcag
aatgtgtctttcagcgtacaacctcagaaccttaacactgatggaccaaataacactaac
cccatgaactcttcaccaaaccctatcaatgcaatgcagactaatggactgccaaactgg
gggatggctgttggtatgggggccatcatctcgccccacctgcaaggccttcctggtgct
aatggaacatcagtttctcaagtcagtgggggcaatggtgaaggaatgggtagttcggta
tggggaatatccccaggtaatcctgccacaggaaacggcaattctgggttcagtcagggg
aatggagacactgtgaactcagcattaagtgctaaacagaatggatccagcagtgctgtg
cacaaggaaggaaatggagcaagtgcatgggattcaggacctcctgctggtcctggggta
ctagcatggggcaggggcagtggcaacagtagtgttggtagcatgcattctggagcttgg
ggccaccccaaccgtaacaccagtaatggtgttaatggtgaatggggtaagcccccaaat
cagcattccaatagtgacatcagtggtaaaggatcagcagggtgggatagccctagtgtt
accagccagaatcctgccatgcagcagggcaatgaacaaataaactcttgggccaaagct
gcagcatctgtcaccacagctagtgaagaaagtaatgacggtggtggaggtcaaaatgag
ggcaacactgggagagaaggagcaggagaggccagaaggagagacaaaggggtgatagac
caagggcaagtccagttgccaaggaatgaccttgacccaagagttctgtccaatactggt
tggggacagactcctgtaaagcaaaacactgcctgggaatttgaagaatccccaaggtct
gaacgaaagaatgacaatggaacggaggcctggggttgtacagcttctcagtcttcaaac
tcaggggggaagaatgatgggtccatcatgaacagtacaaatacctcttcagtatctggg
tgggccaactctccaccctcagctgttccagcaaatacaggttggggagacaacaacaac
aaagcgccaaatggcccagggggatggggagaatcagctagctctactgctgtcaatgct
gctgctgctactgctgccaaaagtggccacgcttggagtgggaccgcaaatcaggaggat
aaatcaccgacatggggtgaacctcagaaacccaaatctcaaaactggggagatggacag
aaatcaaatccaggctggacttcaggaagtggagattggactgaaccatcatctgtccct
ggacacttggctgaggggaagaagaatggatctggatgggatgctgacaatagatcaggg
tcaggttggaatgatactacaaggtctgggaccagtggatggggaaatggcacaaacacc
aaggctaatacaggtacaagttggggagaatctctaaaacctagccctcaacagaattgg
gctagtaaaccccaggacaacagtgtgagtaactggggaggagcagcttctgttaaacag
actgggtcaggatgggttggtgggccagtgccacccaaacaaaaagaaagcagtgaggcg
actggctgggaagagccttctccaccatccattcgccgtaagatggaaattgatgatggt
acctcagcttggggtgatccaaactacaacaacaacaagactgtaaacatgtgggataga
aacaaccctgtaattcagagcagtaccacaaccaacaccaccactactaccaccattatc
aacacaaatatggctgaacctcagccttcgcaccagtcaagtgcccagccgaaccggtcc
ccactgcttggtccagcaggctggggagaaatgcctactgtccacacaaagactgaatct
tcttggggagagccctcatccccttctgctgcagttgataatggaacttcagcatggggg
aaacctcccagcagtggtacagggtggggagataattctgccgagccagcagggacctat
ggaagagtgaatgctccagctgctgccccagcactgtgcaagccagcttctaaatctatg
caagaaggctggggcagtggtggggatgaagtgaacctcagtactagtcagtgggaagat
gaagaaggagatatgtggaataatactgcttcacaagagagtaactcctcctgtaattca
tgggggaatgccccaaagaaaggacttcaaaagggcatgaagacatctagtaagcaagat
gaggcctggatcatgaaccgtctgataaaacagctcacggacatgggcttcccaagagag
ccagcagaagaggccttgaagagcaacaatatgaatctcgatcaggccatgagtactctg
ctggaaaagaaggtggaaatggacaagcgtggaatgggagtgaccgactataatggaatg
gtcaccaaaccccttggctgccgcccaccatcaatctccaaagagtcttccatggaccgc
cccaccttccttgacaaggatggcggcctagtggaagagcccactacttcaccatttttg
ccttcaccaagcctgaagctccccctttcaaacagtgcactccctaatcagaccctgggc
gggattgcctcagggctgggcatgcaaaacttgaattcttctagacagataccgagtggc
aatctgggtatgtttggcaatagcggagcagcacaagccaggaccatgcaacagccgcag
caaccgccagtgcaacctcttaactcatcccagcctagtcttcgtgctcaagtgcctcag
tttctatcccctcaggttcaagcacagcttttgcagtttgcagcaaaaaacattggtctc
aaccctgcactattaacctcgccaattaatcctcagcatatgacgatgttgaaccagctc
tatcagctgcagctggcgtaccaacgtttacaaatccagcagcagatgttacaggctcag
cgtaatgtttccggacctatgagacaacaggagcagcaagttgcacgtacaatcaataac
atgcagcagcagatccagcagcaccagcgccagctggcccaggccctgcttatgaagcag
cagcctccccctccacatctatctttgcacccctctgcaggcaaatcagccatggatagc
ttttcaccccatccccaggctcccggcctacctgacctgcagaccaaagagcaacagtct
tctccgaacacctttgctccttaccctcttgctggactgaatccgaacatgaatgtaaac
agcatggacatgactggtggtttgtcagtgaaggatacttctcagtctcagtctcgcctt
cctcagtggacacaccccaactccatggataatatatctagtgctgcttcttcacttgac
cagaattctagcaagcatggtgctattcctggaggtctaagtattggtccttcaggaaag
tcctccattgatgactcttatggacggtacgatctgatccaaaacagtgattcaccagcc
agtcctcctgtagctgttcctcacagctggtcacgtgccaaaagtgatagtgataaaatc
tccaatggttccagcattaactggccaccagaatttcatcctggagtgccgtggaaagga
ctgcagaatattgaccctgagaatgacccagatgtcactcctggaagtgttccaactggg
cctaccattaataccaccatacaagatgttaatcgctatcttctcaagagtggagattct
gaatacatagaaggaactgagggacagttatggctgaggatcccttccatgccttcaggt
cttgaaggttcagttctgcatggaagcattgtgcaaccccagctgctttcgagagggttc
cgactcaatggcaagagagcatggtcatccccaacatcatctcagaatgccacgctgcct
tcatcgagtgcctggccgcttagtgcctccggctacagtagctctttcagcagcattgca
tccgcacctagcattgcaggtaaattgtcagacatcaagtctacatggtcctctggccca
atctctcacacacaagcctctctatcccatgaactatggaaggtacccagaaacactact
gctcctacgagaccacctccaggtttaacaaacaccaagccatcatctacctggggtgcc
agcccactgggttggaccagctcttattcctctggttctgcctggagtactgacagttca
ggaagaacaagcagctggctggttctacgtaacctcacacctcagattgatggttctaca
ctgcggacactgtgtttgcaacacggccctctaattacattccacctgaacctgactcaa
gggaatgctgtggtccgctacagttccaaggaagaagcagccaaggcccagaagtctctg
catatgtgtgttttgggaaacactaccatcttggctgagtttgctggtgaagaagaagta
aaccgtttcttagcacaaggccagccactgccacccacctccagttggcagtccaacact
ggaaccaatcagactcgtatgggctccacgagcagctctcatggattggtacggaatgat
gcaggccactggaatactccctgcctggctggcaaagggagcagcgatttgctctggggt
ggggtccctcagtactcaagcagcctttgggggccccccagcaccgatgatggcagggtt
attggcagcccaacacctttgaatactctgctcccaggtgatcttctcagtggggagtcc
atctag
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