Chelonia mydas (green sea turtle): 102936699
Help
Entry
102936699 CDS
T02989
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmy04515
]
102936699 (CLSTN1)
Cell adhesion molecules [BR:
cmy04515
]
Cadherins
Cadherin related
102936699 (CLSTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
Glyco_hydro_16
EphA2_TM
Toxin_R_bind_N
V_ATPase_I
PFF1_TM
Cadherin_C_2
Zip
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
102936699
NCBI-ProteinID:
XP_037737402
LinkDB
All DBs
Position
18:12732153..12793762
Genome browser
AA seq
977 aa
AA seq
DB search
MLRPGMLCPLLTPAWLLTAGLLCAGVWATRVNKHKPWIETTYHGIVTENDNTVLLDPPLI
ALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKSTGEGIIRAKEKLDCEL
QKDYTFTIQAYDCGKGPDGANAKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKRYD
NILKVEAVDADCSPQFSQICTYEIVTPDVPFAVDKDGYIKNTEKLNYGKEHQYKLTVTAY
DCGKKRAAEDVLVKISIKPTCKPGWQGWSKRMEYEPGTGSLALFPNIHLETCDEPITSIQ
ATVELETNHIGKGCDRDTYSEKSLHRLCGVSSGTAELLPPPSSTANWTIGLPTDNGHDSD
QVFEFNGTQAVKIPDGIVTVNLKEPFMISVWMRHGPGTKEKETILCNSDKTDMNRHHYSL
YVHNCRLVFLFRQDPSEGKTYKPAEFHWKLNQVCDKEWHHYVLNVEFPTVTLYVDGVSYD
PFPVTEDYPLHPSKIETQLVVGACWQEYTGNENDNETVPETSAGGELHMAQFFRGNLAGL
MIRSGKLENKKVIDCLYTCKEGLDLQIADGIGKGMKINVNPSQSTLTLEGDDIDRFDKAM
QHISYLNSRQFPTPGIRRLKITSNVKCFNEEACIAIPFVDGYIMVLQPEEPKISLSGINH
FARSASEFESPEGVSLFPELRIISTITREVEPEGEGDEDPTVQESLVSEEIMHNLDTCEV
TVLGEELNQEQESLEVDMTQLQQKGIEMSSSNLGMIITGVDTMASYEEVLHLIRYRNWHT
VSLFDRKFKLVCSELNGRYVSNEFKVEVNVIHTANPVDHANHIAMQPQFVHPVHHTFVDL
SGHNLANPHPFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMD
WDDSALTITVNPMETYEDQHSSEEEEEEEESEDGEEEDDITSAESESSEEEEGEQEEDQQ
NVNRQQQLEWDDSTLSY
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccccgggatgctctgccccctcctgacgcccgcctggctgctcaccgctggg
ctgctctgcgctggggtctgggctactagagttaacaagcacaagccatggattgaaacg
acatatcatggtatagttacagaaaatgacaacacagtactcctggatccccctttgata
gccctggataaagatgcgcctctgcggtttgcagagagttttgaggtgacagtcaccaaa
gaaggtgagatttgtggatttaaaattcatgggcaaaatgtcccctttgatgctgtggta
gtggataaatccactggtgagggaataatacgcgctaaagaaaaacttgattgtgaacta
cagaaggactacacattcaccatccaggcctatgattgtggaaaaggaccagatggagct
aatgcaaaaaaatcccacaaagcaacagtacatattcaggtgaatgatgttaacgagtat
gctccggtgtttaaagagaagtcctacaaagcaacagttattgaggggaagaggtatgac
aacatcctgaaagtagaagctgtggatgcagattgttctccccagttcagccagatatgc
acctatgaaattgtaactccagatgttccctttgctgttgacaaagatggttatataaaa
aatacagaaaagttaaactatggcaaggagcaccaatataagcttacagtaactgcatat
gactgtgggaagaaaagagctgctgaggatgtattggtgaagattagcattaagcctaca
tgcaagcctggctggcaaggctggagcaaaagaatggaatatgagcctgggactggttct
ctggctctattccctaatatacatttggagacctgtgatgaacccataacttctatacaa
gcaacagttgaactagagactaatcatattgggaaaggttgtgacagagatacttactct
gagaaatcccttcacagactctgtggtgtttcctctggcacagctgagctgcttccccct
ccaagtagcactgctaactggacaataggacttcctactgataatggccatgacagtgac
caagtctttgaatttaatggcactcaagctgtgaagattccagatggcattgtcacagtc
aatctaaaagagccctttatgatttcggtgtggatgaggcatgggcctggtaccaaggag
aaggagacaatactctgcaattcagacaaaacagatatgaaccggcaccactactctctt
tatgtacacaattgccgacttgttttcctcttccgccaagatccttcagagggaaaaact
tacaaacctgctgaattccactggaaactgaaccaggtgtgtgacaaggaatggcatcat
tatgtcctcaatgttgaatttccaacagtgacactctatgtagatggagtttcatatgat
cctttcccagtgactgaggattacccactacatccttccaagatagaaactcagctggta
gttggagcatgttggcaagaatatacaggaaatgaaaatgacaatgaaactgtgcctgaa
acatctgcaggtggcgaactccacatggctcagtttttccgaggcaatctggccggatta
atgatccggtctggtaaactggaaaacaagaaggtgatagactgcctctatacctgcaag
gaaggattagatttgcaaattgcagatggcattggcaaaggcatgaagattaatgtgaat
cccagccagtcaacattgaccttggaaggggatgatattgacaggtttgacaaagccatg
cagcatatttcctacctgaattcccgccagttcccaacacctggaatccggaggctcaaa
atcaccagcaatgtcaagtgtttcaatgaagaagcctgcattgccattccctttgtggat
gggtatataatggtcttgcagcctgaggaacccaagatcagcttgagtggcatcaaccat
tttgcccgttctgcctcagagtttgagagtccagagggagtttctctcttccctgagctt
cgcataatcagcaccatcactcgggaggtggaaccagagggagagggagatgaggatcct
acagtccaagaatctttggtatcagaggaaatcatgcacaacttggatacatgtgaggtc
acagtgctaggagaggagctaaatcaggagcaggaaagcctcgaggttgacatgacacag
ttacagcagaagggcattgagatgagcagctccaaccttggcatgatcatcacaggtgtt
gatactatggccagctatgaggaggttttgcacttgatacgctatagaaactggcacact
gtctccctgtttgaccgaaagttcaagttggtctgttctgagcttaatggtcgctatgtc
agcaatgaatttaaagtggaggtgaatgttatccatacagctaacccagttgaccatgca
aatcatatagctatgcaaccacagtttgttcatccagtgcatcacacgtttgttgacctc
tctggtcacaacctagctaacccccaccccttttcagttgttccaagtactgctactgtt
gtcattgtcgtgtgtgtcagtttcctggttttcatgattattctgggtgtgttccgaatc
cgagctgcgcatcagagaacaatgcgtgaccaggatactggaaaggaaaatgagatggat
tgggatgactctgccttgaccattactgtgaatcctatggagacatatgaggaccagcac
agcagtgaggaggaggaggaggaagaagaaagtgaagatggagaggaagaagatgatatc
actagtgcagagtctgaaagcagtgaggaggaggaaggggagcaggaagaggaccaacag
aatgttaacagacagcaacagctggaatgggatgactctacactcagctattga
DBGET
integrated database retrieval system