KEGG   Chelonia mydas (green sea turtle): 102936699
Entry
102936699         CDS       T02989                                 
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
  KO
K22659  calsyntenin 1
Organism
cmy  Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cmy04515]
    102936699 (CLSTN1)
Cell adhesion molecules [BR:cmy04515]
 Cadherins
  Cadherin related
   102936699 (CLSTN1)
SSDB
Motif
Pfam: CLSTN_C Cadherin Laminin_G_3 CDC45 Laminin_G_2 Glyco_hydro_16 EphA2_TM Toxin_R_bind_N V_ATPase_I PFF1_TM Cadherin_C_2 Zip Piezo_TM1-24
Other DBs
NCBI-GeneID: 102936699
NCBI-ProteinID: XP_037737402
LinkDB
Position
18:12732153..12793762
AA seq 977 aa
MLRPGMLCPLLTPAWLLTAGLLCAGVWATRVNKHKPWIETTYHGIVTENDNTVLLDPPLI
ALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKSTGEGIIRAKEKLDCEL
QKDYTFTIQAYDCGKGPDGANAKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKRYD
NILKVEAVDADCSPQFSQICTYEIVTPDVPFAVDKDGYIKNTEKLNYGKEHQYKLTVTAY
DCGKKRAAEDVLVKISIKPTCKPGWQGWSKRMEYEPGTGSLALFPNIHLETCDEPITSIQ
ATVELETNHIGKGCDRDTYSEKSLHRLCGVSSGTAELLPPPSSTANWTIGLPTDNGHDSD
QVFEFNGTQAVKIPDGIVTVNLKEPFMISVWMRHGPGTKEKETILCNSDKTDMNRHHYSL
YVHNCRLVFLFRQDPSEGKTYKPAEFHWKLNQVCDKEWHHYVLNVEFPTVTLYVDGVSYD
PFPVTEDYPLHPSKIETQLVVGACWQEYTGNENDNETVPETSAGGELHMAQFFRGNLAGL
MIRSGKLENKKVIDCLYTCKEGLDLQIADGIGKGMKINVNPSQSTLTLEGDDIDRFDKAM
QHISYLNSRQFPTPGIRRLKITSNVKCFNEEACIAIPFVDGYIMVLQPEEPKISLSGINH
FARSASEFESPEGVSLFPELRIISTITREVEPEGEGDEDPTVQESLVSEEIMHNLDTCEV
TVLGEELNQEQESLEVDMTQLQQKGIEMSSSNLGMIITGVDTMASYEEVLHLIRYRNWHT
VSLFDRKFKLVCSELNGRYVSNEFKVEVNVIHTANPVDHANHIAMQPQFVHPVHHTFVDL
SGHNLANPHPFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMD
WDDSALTITVNPMETYEDQHSSEEEEEEEESEDGEEEDDITSAESESSEEEEGEQEEDQQ
NVNRQQQLEWDDSTLSY
NT seq 2934 nt   +upstreamnt  +downstreamnt
atgctgcgccccgggatgctctgccccctcctgacgcccgcctggctgctcaccgctggg
ctgctctgcgctggggtctgggctactagagttaacaagcacaagccatggattgaaacg
acatatcatggtatagttacagaaaatgacaacacagtactcctggatccccctttgata
gccctggataaagatgcgcctctgcggtttgcagagagttttgaggtgacagtcaccaaa
gaaggtgagatttgtggatttaaaattcatgggcaaaatgtcccctttgatgctgtggta
gtggataaatccactggtgagggaataatacgcgctaaagaaaaacttgattgtgaacta
cagaaggactacacattcaccatccaggcctatgattgtggaaaaggaccagatggagct
aatgcaaaaaaatcccacaaagcaacagtacatattcaggtgaatgatgttaacgagtat
gctccggtgtttaaagagaagtcctacaaagcaacagttattgaggggaagaggtatgac
aacatcctgaaagtagaagctgtggatgcagattgttctccccagttcagccagatatgc
acctatgaaattgtaactccagatgttccctttgctgttgacaaagatggttatataaaa
aatacagaaaagttaaactatggcaaggagcaccaatataagcttacagtaactgcatat
gactgtgggaagaaaagagctgctgaggatgtattggtgaagattagcattaagcctaca
tgcaagcctggctggcaaggctggagcaaaagaatggaatatgagcctgggactggttct
ctggctctattccctaatatacatttggagacctgtgatgaacccataacttctatacaa
gcaacagttgaactagagactaatcatattgggaaaggttgtgacagagatacttactct
gagaaatcccttcacagactctgtggtgtttcctctggcacagctgagctgcttccccct
ccaagtagcactgctaactggacaataggacttcctactgataatggccatgacagtgac
caagtctttgaatttaatggcactcaagctgtgaagattccagatggcattgtcacagtc
aatctaaaagagccctttatgatttcggtgtggatgaggcatgggcctggtaccaaggag
aaggagacaatactctgcaattcagacaaaacagatatgaaccggcaccactactctctt
tatgtacacaattgccgacttgttttcctcttccgccaagatccttcagagggaaaaact
tacaaacctgctgaattccactggaaactgaaccaggtgtgtgacaaggaatggcatcat
tatgtcctcaatgttgaatttccaacagtgacactctatgtagatggagtttcatatgat
cctttcccagtgactgaggattacccactacatccttccaagatagaaactcagctggta
gttggagcatgttggcaagaatatacaggaaatgaaaatgacaatgaaactgtgcctgaa
acatctgcaggtggcgaactccacatggctcagtttttccgaggcaatctggccggatta
atgatccggtctggtaaactggaaaacaagaaggtgatagactgcctctatacctgcaag
gaaggattagatttgcaaattgcagatggcattggcaaaggcatgaagattaatgtgaat
cccagccagtcaacattgaccttggaaggggatgatattgacaggtttgacaaagccatg
cagcatatttcctacctgaattcccgccagttcccaacacctggaatccggaggctcaaa
atcaccagcaatgtcaagtgtttcaatgaagaagcctgcattgccattccctttgtggat
gggtatataatggtcttgcagcctgaggaacccaagatcagcttgagtggcatcaaccat
tttgcccgttctgcctcagagtttgagagtccagagggagtttctctcttccctgagctt
cgcataatcagcaccatcactcgggaggtggaaccagagggagagggagatgaggatcct
acagtccaagaatctttggtatcagaggaaatcatgcacaacttggatacatgtgaggtc
acagtgctaggagaggagctaaatcaggagcaggaaagcctcgaggttgacatgacacag
ttacagcagaagggcattgagatgagcagctccaaccttggcatgatcatcacaggtgtt
gatactatggccagctatgaggaggttttgcacttgatacgctatagaaactggcacact
gtctccctgtttgaccgaaagttcaagttggtctgttctgagcttaatggtcgctatgtc
agcaatgaatttaaagtggaggtgaatgttatccatacagctaacccagttgaccatgca
aatcatatagctatgcaaccacagtttgttcatccagtgcatcacacgtttgttgacctc
tctggtcacaacctagctaacccccaccccttttcagttgttccaagtactgctactgtt
gtcattgtcgtgtgtgtcagtttcctggttttcatgattattctgggtgtgttccgaatc
cgagctgcgcatcagagaacaatgcgtgaccaggatactggaaaggaaaatgagatggat
tgggatgactctgccttgaccattactgtgaatcctatggagacatatgaggaccagcac
agcagtgaggaggaggaggaggaagaagaaagtgaagatggagaggaagaagatgatatc
actagtgcagagtctgaaagcagtgaggaggaggaaggggagcaggaagaggaccaacag
aatgttaacagacagcaacagctggaatgggatgactctacactcagctattga

DBGET integrated database retrieval system