Chelonia mydas (green sea turtle): 102936758
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Entry
102936758 CDS
T02989
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04020
Calcium signaling pathway
cmy04080
Neuroactive ligand-receptor interaction
cmy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102936758 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102936758 (GRIN1)
04082 Neuroactive ligand signaling
102936758 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmy04040
]
102936758 (GRIN1)
Ion channels [BR:
cmy04040
]
Ligand-gated channels
Glutamate (ionotropic)
102936758 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Rap-GAP_dimer
Motif
Other DBs
NCBI-GeneID:
102936758
NCBI-ProteinID:
XP_037735494
LinkDB
All DBs
Position
16:4213880..4288874
Genome browser
AA seq
963 aa
AA seq
DB search
MSTMRLLLLAVLVSFSFARAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHGTWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSNVWFEMMRVYNWNHIILIVSDDHEGRAAQKKL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTSLLLEAKELEARVI
ILSASEDDAATVYRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESA
HISDAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSCKYTEGVTGRLE
FNEDGDRKFANYSIMNLQNRKLVQVGVYNGSHVLPNDRKIIWPGGETEKPTGYQMSTKLK
IVTIHQEPFVYVKATQADGTCKEEITINGDPVKKVFCTGPNETIPGRPTVSLCCYGFCID
LLIRLAGVMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDSKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQSSLSLVALGFSFRKGPEH
FFLVDRKSGRAEPDPKKKATFRSITSTLASSFKRRRSSKDTQYHPTDITGQLNLSDPSVS
TVV
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcgcctgctgctgctcgccgtgctcgtctccttctccttcgcccgcgcc
ggctgcgaccccaagatcgtcaacatcggcgcggtgctgagcaccaagaagcacgagcag
atcttccgcgaggcggtgaaccaggccaacaagcgccacggcacgtggaagatccagctg
aacgccacctcggtcacccacaagcccaacgccatccagatggccctgtccgtctgcgag
gacctcatctccagccaggtctatgcaatattagttagtcacccacctgctccaaatgac
cacctaacaccaacacctgtatcatacacagctggcttctacaggattcctgtcattggt
ctgacaacacgcatgtctatatattctgataagagcatccacctgtccttcctgcgcact
gtcccaccatactctcaccagtccaatgtctggtttgagatgatgcgagtgtacaactgg
aatcacatcatactaatcgtcagtgatgaccacgagggtcgcgctgcacagaagaagctg
gagacactcctggaagagagagaatccaagagtaaaaaaaggaactatgaaaacctcgac
caactttcctatgacaacaagcgaggacccaaggctgagaaagttcttcagtttgacccg
ggaaccaaaaatgtgacttcactgctgcttgaagcaaaggagctggaggctcgggttatc
atcctctctgcaagtgaggacgatgctgccacagtgtacagatcggcagccatgctcaat
atgacgggctcaggatacgtgtggctggtgggggagagagagatatctggcaatgccctg
cgatacgcccccgatggggtgattggtttgcagctcattaacgggaagaacgagtcagct
cacatcagcgatgctgtcgcagtggtagctcaggcagtccatgacttattcgagaaggag
aatatcacggaccccccgagaggctgcgttgggaacaccaacatctggaagactggccct
cttttcaagagagtgttgatgtcgtgcaagtacaccgagggtgtgaccgggagactggag
ttcaacgaagacggggacaggaaattcgccaattacagcatcatgaacctgcagaaccgg
aaactggttcaagttggggtttacaatggcagccatgttctgcccaatgaccggaagatc
atctggccggggggagagacagagaaacctacgggctatcagatgtcaaccaaattgaag
attgtgacaattcaccaagagccctttgtgtacgtgaaagcaacacaagccgatggaaca
tgtaaggaagaaattaccatcaatggagacccagtgaaaaaggtcttttgcactggaccc
aatgagaccatcccaggacgccccactgtgtcgctgtgctgctatggcttctgcatcgac
ctgctgatcagacttgccggggtgatgaatttcacctacgaagttcacctggttgctgat
ggtaaatttggcacacaggagcgggtcaataacagcaataagaaggagtggaacgggatg
atgggggagctcctgagcggccaggcagacatgatcgtagcccccctcaccatcaataac
gagcgtgcgcagtacatcgagttctccaagcccttcaagtaccagggtctcaccatcctg
gtgaagaaggaaatcccccgcagcaccctcgactcgttcatgcagcctttccagagcacg
ctgtggctgctggtgggactctcagtgcatgtcgtggccgtgatgttgtatctcttagac
cggttcagcccgttcggccggttcaaagttaacagtgaggaagaggaggaagacgcgctg
accctctcctcggccatgtggttctcctggggagtgctgctgaactctgggatcggagaa
ggtgctccccggagtttctctgctcgtatccttggcatggtgtgggctggctttgctatg
atcattgtggcttcctacactgccaacctggctgccttcctggtgttagacagacctgaa
gagagaatcacaggcattaacgaccccaggctgcggaacccctccgataagttcatctac
gccacggtgaagcagagctcggtggacatttacttccggcggcaggtggagctgagcacc
atgtaccggcacatggagaaacacaactacgagagcgctgccgaagccatccaggctgtc
agggacagcaagctccatgccttcatctgggactcagcagtgctggagttcgaagcctcc
cagaagtgtgacctggtgacaacaggggagcttttcttccgctctggctttgggattggg
atgcgcaaagacagcccatggaagcagaacgtctccctggccatcctcaaatcccatgag
aacggcttcatggaggatttggacaagacttgggtgaggtatcaggagtgtgattcccgt
agcaatgccccagcaacactcacctttgaaaatatggcaggtgtatttatgctggtggct
ggaggtattgttgccgggatatttttaatattcatagaaatagcttacaaaaggcataag
gatgcgcggaggaagcagatgcagctggcgtttgcggccgttaacgtgtggcggaaaaac
ctgcagtcctctctctctcttgtggcgctaggattcagcttcagaaaaggcccagagcat
ttttttttagtggatagaaaaagtggtagagcagaacctgaccctaaaaagaaagccact
tttaggtccatcacctccaccctggcctccagcttcaagagacgtaggtcctccaaagat
acgcagtatcatcccactgacatcaccgggcaactcaatctctccgacccctcagtcagc
actgtggtgtga
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