Chelonia mydas (green sea turtle): 102936848
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Entry
102936848 CDS
T02989
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102936848 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102936848 (EDC4)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102936848 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
102936848 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WDR55
NBCH_WD40
Uteroglobin
CelTOS
Motif
Other DBs
NCBI-GeneID:
102936848
NCBI-ProteinID:
XP_037733808
LinkDB
All DBs
Position
12:4442384..4502113
Genome browser
AA seq
1455 aa
AA seq
DB search
MNVVVHICCLRLPADSGIYHHISYLGHFWKASSAAITTRDVHWMCGTVSVTLDEWLELAA
FGPQGRLNLMGEELKDLYTGSVNENQRPPNSYNGDLNGLLVPDPVAAGDGAPLAKPMLRT
VPLGTLQEKQVICLSGDDSSTCVVISAKDVEIVASSDSSITSKARGSNKVKIQPVARYDW
EQKYYYGNLIAVSNSYLAYAIRGASNGSAMVRVLSISTAERTLLKGFTGGVADLAFAHLN
SNQLACLDEAGNLFVWCLAMDNGKIQEEILVNIKRPEGTPLNSFRRIIWCPFIPDENEES
GEEGSQTLALLHEDRAEVWDLDIIRANNSSWPVEVTNIKEGFIVVKGHSTCLSEGALSPD
GTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDPEVPFWR
FLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSKSVPPSLKACLDLSAEFLILSDVQR
KVLYVMELLQNQEEGRAYFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPAEEESDSLS
TEGAQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMAAPIPPHGSHEDFAFPD
HLADLGAEGLGSEKGSVHGSQPDLRRIADLPVPADFLALSNDAKPKLMTPDAFMTPSTSL
QQIAVSPGSSVSSLTAVTAMSSASVNDPTVPRPSEDLTLSPKMQLDTSLTLSSSSSSLQT
SPRNHSVLIPGLSDKLTPKAPVPVTPANPPLALELQEVEPLVVAQASPTRERSPDVISSA
STAMSQDIPEIASETLQRSFAAAPAGLPAEVLEPNHHADSMASAASALHLLSPRNRHSSE
HSQHSLDMAPVEVDRLTTPSLLETALTQENASSNSVVSQPWPAAPDITRETRNSIADSPR
DDVAEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFSAKASAQRLPVK
DWKAKVSPRASPKLKRKGKKDDGDVTQSPRSCDRQVTAECQDELMSLLRSQQRELTELRQ
NQMELMQRLTDHLDAVQSSLMGHMERVIDSQQEQEQRRLDRALAEGQQRNGQLQEHLSQQ
LSQSLSTAACNRLERTIREEMKKTVPQYISKSLDPVTGQLSNTIAAKLTAVEGTLKENIT
KLVKSKNLTDAVARAAADALQGPIQSAYKEAFQSVVLPAFEKSCQSMFQQINDTFKQGTQ
EYIQQLETHMKNKKAREQEARDSMLGQLRQLISTFQSSTDQLASTIATSVHTEVQHQLHV
IVGNMQDSILTQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSAHLDFQSQQT
HVLQLLQQGRLNQAFQQTLTAADLNLVLYVCETVDPQQVFGQHPCPLSQPVLLSLIQQLS
SDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLFQFLQVESHNTLSKPAR
RLMIMLQGLVTPSMT
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtggtagttcacatctgttgtctcaggctgcctgcagactcaggaatttaccac
cacatcagttacttgggtcatttttggaaggcttcctctgcagccataacaactagagac
gtacactggatgtgtggcactgtcagtgtgacactggatgaatggcttgagctggctgca
tttggcccacagggcagacttaacctgatgggagaagaactaaaggacctctacacaggt
tcagtgaacgaaaaccaaaggccacccaactcgtacaacggggacttgaatgggctgctg
gtgccagaccccgttgcagctggagatggagctcccctggcgaaaccaatgctccgaact
gttcctctgggaaccctgcaagagaagcaagtcatctgcctttctggagatgacagctcc
acctgtgtggtgatatcggcaaaagacgtggagattgtggccagcagtgactctagcatc
accagtaaggccagagggagcaacaaggtaaaaatacagccagtagccaggtatgactgg
gagcagaaatactactatggcaatctgatagctgtatcaaactcctacctggcatatgcc
attagaggtgccagtaatggctctgctatggtgcgggtactgagcatcagcactgccgag
cggaccttgctgaaaggattcacgggcggcgtggcagacctggctttcgcccatctcaac
tccaaccagctggcctgcctcgatgaggctggcaacctctttgtctggtgcctggccatg
gacaatgggaaaatccaagaggagatcttggtgaacataaaacgacctgagggcaccccg
ctgaacagcttccggagaatcatatggtgccccttcatcccagacgagaatgaggagagc
ggtgaagagggcagccaaacgttggcattgctgcacgaggacagggcagaggtttgggat
ctggatattatccgagccaacaacagttcctggccggtggaggtgactaacatcaaagag
ggcttcatcgtggtgaaaggccacagcacgtgcctgagcgagggagcgctctctccggat
gggacggttttggccacagcaagccacgatggctatgtcaaattctggcagatctacata
gaggggcaagatgagccaaggtgcctgcatgaatggaagccccatgacggcaggccgctc
tcctgcctgctcttctgtgataatcacaaaaaacaagacccagaggttcctttctggaga
tttctcatcactggagcagatcagaaccgagagctgaagatgtggtgcaccgtttcttgg
acctgtctgcaaactgtccgcttttcccctgacatcttcagttccaagagtgttcccccg
agtctgaaagcttgcctggacctctctgctgaattcctgatcctgagtgacgtgcagaga
aaagtcctgtacgtgatggagcttttgcagaaccaggaggagggcagagcttacttcagc
tccatctcggagttcctcctcacccacccggtcctgagcttcggcatccaggtagtgagc
cgctgccggctgcggcacacagaggtcctcccagctgaagaggaaagcgacagcctgagc
acagaaggtgctcagggggctggggctgtcgaatcagccgcaggtgtgctgatcaagctc
ttctgcgtccacaccaaggccctgcaggatgtgcagatcagattccaacctcttcatagt
ccagatatggccgcaccgatccctccccatggctcccatgaagatttcgcgtttccagac
cacctggctgacttgggcgcagaagggctgggatcggagaaggggtccgtacatggctcc
caaccagacttacggcgcattgcagacctgcccgtgccagcagattttcttgccctctcc
aatgatgccaaacccaagctgatgaccccagatgcgttcatgaccccaagcacatctctt
cagcagattgccgtgtcgccgggaagcagcgtcagttccctgactgcagtcacagccatg
agcagcgcttctgtcaatgaccccactgtgcccaggccatctgaagacctgactttgagc
ccaaagatgcagctggacaccagcctcacgctgagcagcagtagcagcagtctccagacg
agtcctaggaaccattcagtccttatccctggactctctgacaagctgaccccaaaggcg
cctgtcccggtcactccagcaaacccccctctggctctggagctgcaggaagtggagccc
cttgtggtagcccaggcctcacccacccgggagcgctcccccgatgtcatttcctcggcc
tccacggccatgtcccaggatatcccagagatcgcctctgagacgctgcagcgcagcttt
gccgcagccccagccgggctccctgcagaggtgctggagcccaatcaccatgcggacagc
atggcctcagctgcgtcggccttgcacttgctgtccccgaggaaccggcacagctccgag
cacagccagcactccctggacatggcccccgtggaggtggacagattgaccacaccctcg
ttactggagactgctttaactcaggaaaatgcatcttccaacagcgtcgtgagccagccg
tggccagcagcccccgacatcaccagggaaaccaggaacagcatagcagacagcccaagg
gatgacgttgcagagaagcacaagagctcttcctatcacaggcacagctaccacctgctg
cagcacgacagccaggatgccagcgcagagcaaagtgaccatgatgatgaagttgcaagt
ttggcttctacatcaggcgggtttagtgccaaagcatctgcacagaggctgcctgtgaag
gactggaaagccaaggtgtcccctcgggcttcccccaagctcaaacggaagggcaagaaa
gatgacggggatgtgacccagtccccaagatcatgtgatcgccaggtgactgccgagtgc
caggatgagctgatgtctctgctgcggagccaacagagggagctcacagagctgagacag
aaccagatggaactaatgcagagacttactgaccacctggatgctgtgcagagctccctc
atgggtcacatggaacgagtgattgattctcagcaagaacaagagcagcggaggctggac
cgagctctggccgaggggcagcagcggaacgggcagctccaggagcacctgtcccagcag
ctgtcgcagtccctctccactgctgcatgcaatcgcctggagaggaccatccgcgaggag
atgaagaagacagtgccccagtacatttccaagagcctggaccctgtcactggccagctg
agcaatacgattgccgccaagctcaccgctgtcgaggggacattgaaggaaaacatcacc
aagctagtgaaatcaaagaacctgacagatgccgttgcgagggcagcggcggatgctctg
caggggcccatccagtcggcgtacaaggaggcgttccagagcgttgtgttgccagcgttt
gagaagagctgccagtccatgttccagcaaatcaacgacaccttcaagcaggggacgcag
gaatatatccagcagcttgagactcacatgaagaacaagaaggcgcgagagcaggaggcc
cgagactccatgctgggccagctccggcagctgatcagcaccttccagagcagcacagac
cagctggcctccaccatcgctaccagcgtgcacaccgaagtgcagcaccagctgcatgtc
attgtgggcaacatgcaggactctattctgacccaggtgcagagggttatcaagggagag
gtgagcctggccatgaaggagcagcaagcggccgtcacctcgagcattgtgcaggcgatg
cgctccgcagcaggcacgcccatcccctctgctcacctggacttccagtctcagcagact
cacgtcctgcagctgctgcagcagggccgcctcaaccaggctttccagcagactctcaca
gcagctgatctgaacctggtcctatatgtctgtgagacggtggatcctcagcaggtgttt
ggacagcacccatgtccgctctcccagcccgtcctcctgtctctcattcagcagctctcc
tcggatctgggcacccgcaccgaactgaaactgaattacctggaggaggcggtgatgcac
ctggaccacagcgaccccatcacccgagaccacatgggatcggtcatgaaccaggtgcgg
cagaagctcttccagttcctgcaggtggaatctcacaacaccctgagcaagccggcccgc
cgcctcatgatcatgcttcagggcttggtcacccccagcatgacctaa
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integrated database retrieval system
