Chelonia mydas (green sea turtle): 102936886
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Entry
102936886 CDS
T02989
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04510
Focal adhesion
cmy04512
ECM-receptor interaction
cmy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102936886 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102936886 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102936886 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cmy00535
]
102936886 (COL9A3)
Proteoglycans [BR:
cmy00535
]
Extracellular matrix (ECM) proteoglycans
Others
102936886 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102936886
NCBI-ProteinID:
XP_037733101
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Position
13:complement(7171827..7243873)
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AA seq
681 aa
AA seq
DB search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NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggctggattctcagctcttgggctgctctttctttttcaactactagccacatcctca
gctcagagagcaggaccacgaggccctcctggaccacgaggactccctggaccacctggc
aaggaaggcatagacggagaacctggcccacctggtttacctggcccaccagggccgaaa
ggtgcaccagggaagcctggaaaggcaggtgaagcagggttacctggccttcctggagtg
gatggtttaacaggacctgatggcccgcctggcccaaatgggccaccaggagaaagaggt
gctttaggacctgcagggccgtctggaccagctggcaagggactgccaggccctccgggg
cctccaggagccagtggactcccaggtggaaacggacttcaggggccacctggaccatca
ggtcttccaggattcccaggacagcctggacctccaggacctccaggtcttcctggggtt
cttcctgatggcggcggggaccttcagtgtccagctctctgccccccaggccctccgggt
cctccaggaatgccaggattcaaggggcacacaggccacaaaggagaacctggggaaaca
ggaaaagatggtgagaagggagacgcaggccctccaggtcctccggggattccaggcagt
gtcggcctgcaggggccaagagggttaagaggcctcattgggccagagggctcagtcggg
gacaggggaccttttggtttcagagggccaccaggactcccaggacctccagggaaagca
ggaggccgaggagacaaaggacctcaagggttcagagggcccaaaggtgatactggtaga
cctggaccaaaaggatcgccagggaccggtggacccagaggagaacctggcatgcctggc
aaagatggacgagatggaacacctggactcgatggtgagaagggtgacgctgctcgcttc
ggtcctccgggagagaaggggccaaatggacttcctgggctacctggaagaccaggtcac
aagggtccaaagggtgaactaggtagtcctggagagatgggagaggcaggtccatcggga
gagcctggtatccctggcgatgctggtatccctggtgagagaggtgagcctggacctcga
ggatcatctggcgcacttggtcttcaaggcccattgggagccccaggtgtaagaggcttt
cagggccgcaaaggtgccagtggggaacctggactccctggccctacggggattcgtggt
gaatttggtgacaggggttctggtggagtttctggccccaaaggtaaccagggcactgct
ggagcagatggcctgccaggtgacaaaggagaactgggtccttttggccccccgggacaa
aagggagagtccggaaaaagaggcgagctgggtcctaaaggtatacaaggacctaacggg
acttctggtgtgcaagggattccaggtcatccaggacctatgggctaccagggagagcaa
ggtatccctggcattactggaaaacctggccctccaggcaaagaggccagtgaacaacat
ataagagaactctgtgggggaatgataaacgaacaaattgcacagttagctgctaatttg
agaaggcccttggctcctggactgacgggtcgacctggcccagcgggtcccccaggtcca
cctggggcaatgggaagtgttggtcatcccggtgctcgtggtccacctggatatagaggg
ccaacaggagaacttggagaccctggtcccagaggtgatacaggtgaaaagggagacaaa
ggagccactggcataggtattgatggtcctgatggagatcaaggacttcaaggtccacca
ggtgtaactggaattagtaaagatggtcgagatggtgctcatggtgaacctggtctgcca
ggtgatcctggtgtacctggtgcaataggggctcagggaactccaggaatctgtgatacg
tcagcctgcatgggtgctgttggaggaggatccaaaaaatcatcagcactgaaactgcag
aagtga
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