Chelonia mydas (green sea turtle): 102937212
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Entry
102937212 CDS
T02989
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102937212 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmy04131
]
102937212 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmy04147
]
102937212 (VPS36)
Membrane trafficking [BR:
cmy04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
102937212 (VPS36)
Exosome [BR:
cmy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102937212 (VPS36)
Exosomal proteins of colorectal cancer cells
102937212 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
Xre-like-HTH
DUF1351
HCP
Motif
Other DBs
NCBI-GeneID:
102937212
NCBI-ProteinID:
XP_037748921
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Position
1:complement(54986143..55012676)
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AA seq
386 aa
AA seq
DB search
MDRFAWASGLLEINETLVIQQRGVRLYDGEEKVKFDTGVLLLSTHRLIWRDLKNHECCIA
IPLSQIVFIEEQAAGIGKSAKIVVHLHPAPSNKEPGPFQSSKYSYIKLSFKEHGQIEFYR
RLSEEMTQRRWENMPVFQTIQINRGPQAGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSKSIANKIKEKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTH
YHMQLAKQLAGILQAPLEERGGIMSLTEVYCLVNRARGLELLSPEDLVNACKMLVALKLP
LRLRLFDSGVMVIELQSHNEEEMVASALDTVSEKGSLTAEEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFMTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccggttcgcgtgggccagcggcctgctggagatcaacgagaccctggtgatccag
cagcgcggggtgcggctttacgacggggaggagaaggtaaagtttgatactggggtattg
ctacttagcacacaccgactgatctggagagatctgaaaaatcatgaatgctgcattgct
atccctctttctcagattgtcttcattgaagagcaggcagctggcataggaaaaagtgcc
aaaatagtggttcatcttcatccagctccttcaaacaaagagcctggcccattccagagc
agcaaatattcctacatcaaactttctttcaaagaacatggtcagattgagttctatagg
cggttgtcagaagaaatgacacagaggagatgggagaacatgcctgtttttcagaccatt
caaattaacaggggtccacaggcaggaagaataagggctgtaggaattgtaggtattgag
aggaaattagaagagaagagaaaagagactgacaaaaacatttctgaggcttttgaagat
ctcagcaagttaatggaaaaggctaaggaaatggtggagttatccaagtcaatagctaac
aaaattaaagaaaaacaaggtgacatcacagaagatgagactatcaggtttaaatcttat
ctgttgagcatgggtatagctaacccagttaccagggaaacgtatggatctggcacacat
taccatatgcaactggcaaaacaactagctggaatactacaggcaccactagaggaacga
gggggaataatgtcacttacagaggtatattgtctggtaaaccgagctcggggattggag
ttgctctctccagaagatttagtaaatgcttgtaagatgctagtggcactgaaattaccc
ctaaggcttcgtctatttgacagcggtgtaatggtgattgagctccagtcccacaatgaa
gaggaaatggtggcttctgctttagacacagtatctgaaaagggttctcttacagctgaa
gagtttgccaagcttgtggggatgtctgttcttttagccaaagagaggctgcttctagct
gaaaagatgggccatctttgcagagatgattcagtggaaggcttgagattctatccaaac
ttatttatgacacaaagttaa
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