Chelonia mydas (green sea turtle): 102937295
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Entry
102937295 CDS
T02989
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102937295 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102937295 (NUP98)
03036 Chromosome and associated proteins [BR:
cmy03036
]
102937295 (NUP98)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102937295 (NUP98)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102937295 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
102937295
NCBI-ProteinID:
XP_037765718
LinkDB
All DBs
Position
1:8077490..8137300
Genome browser
AA seq
1818 aa
AA seq
DB search
MFNKSFGTPFGGSAGGFGTTSTFGQNAGFGTTSGGAFGTSAFGSNNNTGSLFGNTQTKPG
GLFGSSTFSQPATSSTSTGFGFGTSTGTSNSLFGTASTGGGLFSSQNNAFAQNKPAGFGN
FGTSTSSGGLFGTTNTASNPFGGTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVS
TNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPAVAAAGLFGSSTATSSAATGL
FGSSTTNAGFSYGQNKTAFGTSTTGFGTGTAGSLFGQQPQQTTSLFSKPFGQATTTQNTG
FSFGNASTLGQPNTNTMGLFGATQASQSGSLFGTAANTNAATGFGTGTGTGLFGQANTGF
GVGGSTLFGKPAGFGTTTTSAPSFGTTSGSGLFGNKPTLTLGTNTNTSNFGFGASTAGNS
IFGNKPAAGTLGAGLGTGFGTALSAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLG
FGAPQPAVALTDPNVSAAQQAALQQHFNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNP
AAQKALTTPTHYKLTPRPATRVRPKALQTAGSSKSHLFDGLDDDEPSLSNGAFMPKKSIK
KLVLKNLNSSNLFSPVSREAEDLEPPSEYPENGERFNFLSRSVDENHRQESEREEEDDHH
EVTRFYTNPIAKPIPQTPENAVHKQNNVDDTIVALNMRVALRNGLEGSSEDASFHDESLQ
DDREEENENVYSLHPAGIVLTKAGYYTIPSMEDLAKLTTDRGECIVTDFTIGRKGYGSIY
FEGEVNLTNLNLDEIVHVRRKEVIVYPDDDQKPPIGEGLNRRAEVTLDGVWPTDKTSRCL
IKSPERLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHP
SKVDAKKLKTAQVPSQGQLVPQQMALNGKPTPPAQSPEVEQLGRVVELDSDMADITQEPA
QDSILEDSITEEPELVPASTHIASSLGINPHVLQIMKASLLADEEDVDLILDHHFGKQPT
KMDTSQEICSPRLPISALQGQKRHSSVGGLLQSKFASVSFLPSGSLQDFRGPRTSSLGNP
PSAASWSGLSTLPSAFSMPSAAPEVQLKTVGACRQQGLIPLEKSVTYGKGKLLMDMALFM
GRSFRVGWGPNWTLVNSGDKLSGSSEPEDLRNDSMEYGFLPTPVAPKSLLESPFKVHIEK
LTLERRKTDGDQQLYLIPLEIKLKNSTVHVDECCPLLAANPGVSAIHDYADWVKDFCGDS
GEIEPVVKYWCLTWMLCEAIWGHLKELEASLEEPSEYIVALERRKAFSRWLSQTAAARIE
EEVSLSQYENHIEAVFSYLTGKRISEACRVAQQSGDHRLALLLSQLVGSQQVRELLTMQL
VDWHGLQADCFIQEERLRIFALLAGKPVWQLSERKSINVCSQLDWKRAIAIHLWYLLPPT
ASISKALNMYEAAFQNTTECEKYACCPLPPYLEDSGCVLEEDDSAKRPLRDVCFHLLKLY
SDRCYDLNQLLDPRSITSDPLDYRLSWHLWEVLRALNYTHLSEQCQGVLNASYAAQLESE
GLWEWAIFVLLHTSNTHTREKAVREFLNRHCVLSETPESWTKETFLIQKLCIPPEWIHEA
KAVRARMEGDKHKEALYLFKAGHWNQCHKLVIRHLASDAIINENYNYLKGFLEDLSPPER
STLIQDWDMAGLVYLDYIRVIEMLDRIQQLDCSAYELERLHTKVTSLCNRIEQIQCHNAK
DRLAQSDMAKRVANLLRVVLSLQHSPEPASDSTPDVQRVPLRLLAPHIGRLPMPEDYALE
ELRSLTQSYLRELTVVTQ
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcatttggaactccgtttggaggcagcgctggtggctttgggactact
tcaacatttggacaaaatgcgggctttggtactaccagtggaggagcgttcggaacatca
gcctttgggtcaaacaataacacaggaagcctctttgggaacacacagactaaaccagga
ggattgtttggttcaagtacgtttagccaaccagccacctcctccacaagcactggcttt
gggtttggaacatcaactggaacttccaacagcctgtttgggactgccagcactggtgga
ggtctcttttcatcccagaataatgcctttgctcagaataaaccggctggatttggaaac
tttggaacgagtaccagcagtggaggtctctttggaaccactaacactgcctccaatcct
tttgggggtacatctggctctctctttgggccaactagctttactgctgctccaactggg
actaccattaaatttaatccaccaaccggcacagatactatggtaaaatctggagttagc
actaacatcagcactaagcaccagtgtattactgctatgaaggagtatgaaagcaaatcc
ctagaggaactccgtttggaagattaccaggcaaacaggaaagggccctcaaatccagca
gtagcagctgcggggttatttggatcctccacagctacatccagcgcagctactggactc
tttggctcctccaccactaatgcaggtttttcatatggacagaataaaacggcttttgga
accagtacaactggctttggaacaggaacagcagggagcctttttggtcagcagcctcag
cagactaccagtctgttcagcaaaccatttggccaggccaccacaacgcagaacactggc
ttttcttttgggaacgccagtactcttggacaaccaaatacaaacacgatgggtttattt
ggggcaacccaagcctcgcagtccggaagcctttttggaacagctgccaacacaaatgct
gccactggatttggaacaggaactggaactggtctctttggacaagccaacacaggattt
ggtgttggcggttcgacgctgtttggtaagcctgctggattcggaaccaccacgaccagt
gctccttcgtttggtacaacttctggcagcgggctctttggtaacaaaccaaccctgact
ttaggaaccaatacaaacacttccaattttggttttggtgcgagcactgctgggaatagt
atcttcggaaataagcctgcagctggaactctgggcgccggacttggaacaggatttgga
acagctcttagtgcagggcagacttcactattcggaaacacccagcctaaattaggtgga
acactgggaacaggagcgtttggagcacctggattcaatacatcaacagccaccctgggc
tttggagctccccagcctgctgtggcattgacggacccaaatgtttcagctgcccaacaa
gcagccctccagcagcacttcaacagcttgacctactcgccctttggagattctcctctt
ttcagaaaccctatgtcagacccaaagaagaaagaagagagactgaaaccaactaatcca
gcagcccagaaggctttgactacgccaacccattacaaactgaccccgcgaccagcgacc
agagtgcgaccaaaagctttgcagacagcaggatcttccaaatctcacctctttgatggg
ctggatgatgatgagccatctttatctaacggtgcattcatgcccaagaagagcatcaag
aagctggttttgaaaaacctcaacagcagcaacttgttttctcctgtcagtcgtgaagct
gaagatctggaacctccatcagagtatccagagaatggagagcggttcaactttctatcc
agatctgttgatgagaatcacagacaggagagtgagcgagaggaagaagacgatcaccat
gaagtgactagattttacactaaccccattgccaaacccatcccacagaccccagagaat
gcagtgcacaaacagaataatgtggatgataccattgtggctctgaatatgcgggttgcc
ttgcggaatggcctggaaggcagcagtgaagatgcttcatttcatgatgagtcactgcag
gatgaccgtgaagaggagaatgagaatgtatatagtctgcacccagcaggaattgttcta
acaaaagctggctactataccatcccgtctatggaggatctagctaaacttaccactgac
agaggagaatgtattgtgactgatttcactataggtcgtaaaggttacggatcaatttac
tttgaaggagaggtgaatctaactaacttaaatctggatgagattgtgcacgtccgcagg
aaagaagttattgtctatcctgatgatgatcagaagccacctattggtgaaggtttaaat
agacgagctgaagttacattggatggagtttggccaacggataaaacatctcgctgcttg
ataaagagcccagaacgactagcagatatcaattatgaaggcagactggaggccgtatct
cggaagcagggagcccagttcaaagagtaccgtccagagaccggttcttgggtgttcaag
gtggctcacttctctaaatatggcttgcaagattctgatgaggaagaggaggagcatcct
tcaaaagtggacgcaaagaagttaaaaactgcccaagtgccatcccaggggcagctggtg
ccccaacaaatggctctaaatggcaagccaacgcctccagctcagagcccagaagtggag
cagctgggaagggttgtggaactggacagtgatatggccgacatcacccaggaaccagct
caggattcaatactagaagatagcattacagaagagccggaactggtgcctgcttcgaca
cacattgcatcttcacttggtataaacccccatgtcttacagatcatgaaagcttccttg
cttgctgatgaagaggatgtagacttgatcctggatcatcactttggcaaacagcctaca
aaaatggatacttctcaagagatctgctctcccaggcttccaatttcagcattgcaagga
cagaaaagacactcctcagttggagggctgctgcaatcaaaatttgcaagtgtgtctttc
ctcccgagtggttctctgcaagattttcgtggaccaagaacttcctctttaggcaatcct
ccatctgcagcctcttggtcggggctttccaccttaccctctgcgttctccatgcccagc
gcagctccagaggtgcagctgaaaacagtgggtgcctgtcggcagcaggggctaatacct
ctggaaaaatctgtcacttacggaaaaggaaaactcctaatggatatggcactctttatg
ggacgctcatttcgcgttggttggggacccaattggactcttgtaaatagtggagataaa
ctgagtggatcaagtgagcccgaggatcttcgcaatgactctatggaatatggattcttg
ccaactcctgttgctcctaaatcacttttagaatctcccttcaaggttcatatagagaag
ctgaccttagaacgaaggaagacagatggagaccagcagttgtacctcatccctctggag
ataaagctcaaaaacagtactgtccatgtagacgaatgttgtcctctcttagcagccaac
ccaggagtgtctgccatccatgactatgctgactgggttaaagacttttgtggagactca
ggggaaatagaacctgtggtgaagtactggtgtttgacatggatgttgtgtgaggcaatc
tggggccacctgaaggagttggaagccagcttggaggagcccagtgagtacattgtagcc
ctggagcgcaggaaagccttctcccgctggttatcgcagactgcagcagcacgaattgaa
gaggaagtctcactgtctcagtacgagaatcacatagaggctgtgtttagctaccttact
gggaagaggatcagtgaggcttgtagggtggcacagcaatcaggagatcacaggcttgcc
ctactcctctcccagttggtaggcagccagcaggttcgggagctcctcacaatgcaatta
gtggactggcatggattgcaggcagactgcttcatccaggaggagaggttgcgcatcttt
gctctgctggctgggaagcctgtgtggcagttgtctgaaagaaaaagcattaatgtgtgc
tcacagctggactggaagcgtgctattgctatccacctctggtatctgcttccaccaacg
gcttctatttcaaaggcactcaacatgtacgaggcagcattccagaacaccacggagtgt
gagaaatatgcctgctgtcccctgcctccctacctagaggattctggctgtgtgcttgag
gaagatgacagtgcaaagagacccctgagagatgtctgctttcacttgttaaagctctac
agcgacagatgctatgatctcaatcagctgcttgaccccagaagtataacttccgacccc
ttggactaccgtcttagttggcacctgtgggaagtactcagagccttgaattacactcat
ctatcagagcagtgtcaaggagtcctgaatgccagctatgctgcccagcttgaaagtgaa
ggactttgggaatgggccatttttgtactgctgcatacatccaatacacacacacgtgag
aaagcagtgcgtgaattcttaaaccgccactgcgtgctgtcggaaacgccagaatcctgg
acaaaggagactttcctgatacaaaagctctgcattccaccagaatggattcatgaagct
aaggcagttcgggcaagaatggagggagataagcataaagaggccctctacttgttcaaa
gctggacactggaaccagtgtcacaaactggtcatcaggcacttagcctcagatgctatt
attaatgaaaactacaactacctaaaaggattcctagaagatttgtcccctccagagcga
agtacactcatccaggactgggacatggcggggctggtttatttggactacatccgcgtc
atcgagatgctcgacaggattcagcagctggattgttctgcatatgagttggagaggtta
cataccaaagtgacatcgctatgcaacaggatagaacagatacagtgccacaatgccaag
gaccgattggctcagtctgatatggccaaacgtgttgctaacctgctgcgggtggtcctg
agcctacagcattctcctgaacctgcctctgactccacgcctgacgtgcagcgtgtcccc
cttcgtctgcttgctccccacattggccggcttcccatgccggaggactatgccttggag
gagctgcgcagtctcacacagtcgtatctacgagaactgactgtggtgactcagtga
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integrated database retrieval system
