Chelonia mydas (green sea turtle): 102937301
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Entry
102937301 CDS
T02989
Symbol
ZCCHC7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7 isoform X1
KO
K12597
protein AIR1/2
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102937301 (ZCCHC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmy03019
]
102937301 (ZCCHC7)
03016 Transfer RNA biogenesis [BR:
cmy03016
]
102937301 (ZCCHC7)
Messenger RNA biogenesis [BR:
cmy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
102937301 (ZCCHC7)
Transfer RNA biogenesis [BR:
cmy03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
102937301 (ZCCHC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_3
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
102937301
NCBI-ProteinID:
XP_037758120
LinkDB
All DBs
Position
5:complement(122504208..122664922)
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AA seq
577 aa
AA seq
DB search
MFGGHGDIEAYDDDLYREESSSELSVDSEVEFHLYSQVHYAQSLGEVNGQEENEEVVDSA
EKTEGQSSVLINKLDQGKNHIFSDNDVIQISDGPEVIILSDTPDEDSVYKSKVKKTATSL
TPAKQYSQLGCSTRNPARASAPTTLDSDGKNSSKEKRANKSKPTSAGRVRMIQEILVIED
SSNEEEEEESTISESDNVESWMLLGCDADVRDENIILNLEGCGTAVSEGEDGVDWSISDK
DLEAQIGNYAPLRRTNRYYATDKNVTCRNCDKRGHLSKNCPTPKKIPPCCLCAERDHLQN
TCPARFCLNCCLPGHYSRECLERAYWRKHCNRCDMKGHYADACPEIWRQYHLTTRPGSIK
RSSSYSEHSALVYCYNCSQKGHYGYECSEKRMYNGAFPSSPFIYYYDDEYDIKRRAQRAK
RKVEELQEAGLLPVQFKRLRKEEERRGQCHKKKKNLWKEHVKSPKEEKRHKKANKKSWAE
ERKEKKHKKDVQRNNDQEEDFPRGCRIHSPKGSKKHHGSAFCPHSRKTKNGQELLDAAKK
KKKKRRQRNKKDSSPTIDESLFLIKQRKKKSKQESSC
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgttcggggggcatggagacatagaagcgtatgatgatgacctttatcgtgaggagtca
tccagcgaactaagtgttgacagtgaggtagaatttcatctctatagccaggtccattat
gcacagagtcttggagaagtcaatgggcaggaagagaatgaggaggtagtggactctgca
gagaagacggaaggtcagagttcagttttgatcaataaattggatcagggcaagaaccat
atattttcggacaatgatgttattcagatttcagatggccctgaggtcatcatcttgtct
gacacacctgatgaagacagtgtttacaaaagcaaagtgaagaagacagcaacctcccta
acaccagctaaacaatacagtcaactcggatgctccacacggaaccctgctagagcttct
gcacctactaccttggattctgatggaaaaaattcaagtaaagagaaaagggctaataag
tctaaaccaacttctgctggtagagtacgcatgatccaagagattctggtaatagaggat
agttcaaatgaggaggaagaagaggagagcacaatctctgaaagtgataatgtggagagc
tggatgctgttgggatgtgatgcagatgtcagagatgaaaatatcattttgaaccttgaa
ggctgtggaactgctgtcagtgaaggagaagatggagtggactggtccatcagtgataaa
gacctagaggcacaaattggtaattatgcacccctgagacgcaccaacagatactatgca
acagacaaaaatgttacttgtagaaattgtgataaacggggtcatttgtccaaaaactgt
cctactccaaagaaaattcccccttgttgcctgtgtgcagagagagatcacctacaaaat
acctgcccagcacggttttgtttaaactgctgtttgcctggacactactctagggagtgc
cttgagagagcttattggcgtaaacattgtaaccgctgtgatatgaaaggccattatgct
gacgcttgcccagaaatatggaggcagtatcacctaacaaccagaccaggatcaatcaag
aggtccagttcgtattctgagcattctgcattggtgtactgctacaactgctcccagaaa
ggacattatggatatgagtgctcagagaagcggatgtacaatggggcattcccttcttcc
ccattcatctactactatgatgatgagtatgacatcaagaggagagctcagagggcaaag
agaaaggttgaagaacttcaagaagccggccttttgccagtgcagttcaagagactgcgg
aaggaggaagagcgtaggggacagtgtcataagaaaaagaaaaacctttggaaagagcat
gtaaagagtcctaaagaagaaaagcgccacaaaaaggccaataagaagtcctgggcagag
gaacgcaaagagaagaaacacaagaaagatgtccaaaggaataacgaccaggaggaggac
tttcctagggggtgtagaatacactcccctaagggcagcaaaaagcatcacggctctgcc
ttctgtccacatagcaggaaaacaaaaaatggccaggagctgctggatgcagctaaaaag
aagaagaaaaagagaaggcaaagaaacaagaaagacagtagtcccaccattgatgagagc
ttatttcttataaaacagaggaaaaagaaatcaaaacaggaatccagctgctaa
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