Chelonia mydas (green sea turtle): 102937319
Help
Entry
102937319 CDS
T02989
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmy04040
]
102937319 (TRPC1)
Ion channels [BR:
cmy04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102937319 (TRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
Dsc3_C
LHD_TRPY1
RIN1
Motif
Other DBs
NCBI-GeneID:
102937319
NCBI-ProteinID:
XP_007055061
LinkDB
All DBs
Position
9:complement(31616035..31662880)
Genome browser
AA seq
781 aa
AA seq
DB search
MAALYQSSDPSASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDYYMVKKLLEQNSS
GDMNINCVDVLGRNAITITIENENLDILQLLLDYGCQSTDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPKPHAVG
CECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEV
EFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTASDEHVDKRGLLEERMNLSRLKL
AIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLTVGIFWPVLSLCYLLAP
KSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNENKKNTMGPALERIDYLLIIWLI
GMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDYADRKDWDAF
HPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFT
IGLTQLYDKGFTVNEEKDCAGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFR
YGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYF
DDKCTLPPPFNVIPSPKTICYLVNSLSKWISSHTSTGKVKRQNSLKEWRNLKQKRDENYQ
KVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAMFYPR
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggccgccctgtaccagagctcggacccgtccgcctcggcctcccccaacaagctgctg
gcgctgaaggacgtgaggcaggtgaaggaggagaccaccctggacgagaagctcttcctg
ctggcctgcgacaaaggtgactattacatggttaagaaactcttggagcagaacagctca
ggtgacatgaacataaattgtgtggatgtgcttgggagaaatgctataaccattaccatt
gaaaatgaaaacttggacatactacagcttcttttggattatggctgtcagtctacagat
gcacttttggtggcgattgactcagaagtggtgggagctgttgatatattacttaatcat
cgaccaaaacgatcctcaagaccaactattgtaaaacttatggagcgtattcagaaccca
gagtactcaacaactatggatgtagcacctgtcattctagctgctcatcgtaacaactat
gaaatccttactatgctgttaaaacaggatatatctctacccaaacctcatgctgttggc
tgtgaatgcaccttgtgcacggcaaagaacaaaaaagatagcctacggcactccagattt
cgtcttgacatctatcgttgtttggccagtcctgccttaataatgttgacagaggaggat
ccaatcctgagagcttttgaacttagtgcagacttaaaagagctaagtcttgtcgaagtt
gaattcagaaatgattatgaggaactagcccagcaatgcaaaacctttgctaaagatttg
cttgcacaggcacggaactcacgggaactggaagttatcctaaaccatacagctagtgat
gagcatgtggacaaacgaggattgttagaagagaggatgaatttgagtcgcctaaaactt
gctatcaagtataaccaaaaggagtttgttgcccagtcaaactgccagcagtttctcaac
actgtgtggtttggacagatggcaggctaccgacgcaagcacacgtgtaagaagattttg
actgttttgacagttggcatcttttggccagttctgtctctctgttacttattagcccct
aaatctcgagtaggtcgaataattcacactccttttatgaagtttattattcatggagct
tcatatttcacgttcctgctattacttaacttgtattcactggtctacaatgagaataag
aagaatacaatggggccagcacttgagagaatagactatcttctgataatatggcttatt
ggaatggtgtggtcagatgtcaaaagactttggtatgaaggcctggaagactttttagaa
gaatctcgtaatcagcttagttttgtcatgaattccctctatttggcaacctttgctctc
aaggtagttgctcataacaagttccatgattatgctgatagaaaggactgggacgcattc
catcctacattggtggcagaaggtctctttgcttttgctaatgttcttagttaccttcga
ctcttcttcatgtatacaaccagttctatcctaggaccacttcagatttcaatggggcag
atgttgcaagactttggaaaattcctagggatgttccttcttgtcttgttctcattcacg
attggattgacccaactgtatgacaaaggatttactgtaaatgaagagaaagactgtgca
gggatcttctgtgaacagcaaagcaatgacacattccattcgtttattggcacctgcttt
gctctgttctggtacatattctccctagcacatgtagcaatctttgtcactagatttaga
tacggtgaagaattgcagtcttttgtgggcgctgttattgttggtacctacaacgtagtg
gttgtgattgtccttaccaagctcttagtggcaatgcttcataaaagctttcagctgata
gcaaatcatgaagacaaagaatggaaatttgctcgtgccaagctttggcttagctacttt
gatgataaatgcacactacctccacctttcaatgtcattccttctcccaagactatctgc
tatctcgtcaacagccttagtaaatggatcagctctcatacttcaactggcaaagtcaaa
cgtcagaatagcctaaaggaatggagaaatctgaagcaaaagagggacgagaattaccaa
aaggtgatgtgttgtttagtccatcgttacttaacctccatgagacaaaagatgcaaagc
acggatcaagcaactgtggaaaatctcaatgaactccggcaagatttatcaaaattccga
aatgaaatgagggatctgcttggctttcggacatctaaatatgctatgttttatccaaga
aattaa
DBGET
integrated database retrieval system
